FFCP PHASE1:Hg19::chr9:36925085..36925090,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:36925085..36925090,+ | |||
|description=CAGE_peak_at_chr9:36925085..36925090,+ | |description=CAGE_peak_at_chr9:36925085..36925090,+ | ||
|id=chr9:36925085..36925090,+ | |id=chr9:36925085..36925090,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.87e-17!254;CL:0002322!1.93e-10!5;CL:0002076!2.74e-10!43;CL:0002251!9.56e-10!21;CL:0000223!3.89e-08!59;CL:0000076!7.23e-07!62 | |ontology_enrichment_celltype=CL:0000066!4.87e-17!254;CL:0002322!1.93e-10!5;CL:0002076!2.74e-10!43;CL:0002251!9.56e-10!21;CL:0000223!3.89e-08!59;CL:0000076!7.23e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:1001319;2.47e-19;1!CL:1000600;2.47e-19;1!CL:0002322;2.17e-15;5!CL:0000322;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,5.62e-19,1;CL:1000600,5.62e-19,1;CL:0002322,3.35e-15,5;CL:0000322,1.93e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;2.55e-07;3!UBERON:0003353;2.55e-07;3 | |||
|ontology_enrichment_disease=DOID:305!3.76e-30!106;DOID:0050687!3.02e-27!143;DOID:162!9.10e-26!235;DOID:14566!8.58e-25!239;DOID:1749!1.63e-17!14;DOID:299!9.10e-13!25;DOID:0050686!1.41e-07!137 | |ontology_enrichment_disease=DOID:305!3.76e-30!106;DOID:0050687!3.02e-27!143;DOID:162!9.10e-26!235;DOID:14566!8.58e-25!239;DOID:1749!1.63e-17!14;DOID:299!9.10e-13!25;DOID:0050686!1.41e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.53e-12;14!DOID:3910;2.37e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.74e-12,14;DOID:3910,1.57e-10,2;DOID:305,4.92e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0003729!5.66e-09!5;UBERON:0000344!8.78e-09!12;UBERON:0003343!2.16e-07!4;UBERON:0004785!2.16e-07!4 | |ontology_enrichment_uberon=UBERON:0003729!5.66e-09!5;UBERON:0000344!8.78e-09!12;UBERON:0003343!2.16e-07!4;UBERON:0004785!2.16e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.47e-19;1!UBERON:0001256;2.47e-19;1!UBERON:0001259;2.47e-19;1!UBERON:0001255;2.37e-10;2!UBERON:0004903;2.37e-10;2!UBERON:0001556;2.37e-10;2!UBERON:0002173;2.37e-10;2!UBERON:0002186;2.37e-10;2!UBERON:0004821;2.55e-07;3!UBERON:0007499;2.55e-07;3!UBERON:0003215;2.55e-07;3!UBERON:0010368;2.55e-07;3!UBERON:0009911;2.55e-07;3!UBERON:0002299;2.55e-07;3!UBERON:0006524;2.55e-07;3!UBERON:0008874;2.55e-07;3!UBERON:0002169;2.55e-07;3!UBERON:0004894;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,5.62e-19,1;UBERON:0001256,5.62e-19,1;UBERON:0001259,5.62e-19,1;UBERON:0004903,1.57e-10,2;UBERON:0002173,1.57e-10,2;UBERON:0002186,1.57e-10,2;UBERON:0001255,3.58e-10,2;UBERON:0001556,3.58e-10,2;UBERON:0004821,1.93e-07,3;UBERON:0003215,1.93e-07,3;UBERON:0010368,1.93e-07,3;UBERON:0009911,1.93e-07,3;UBERON:0002299,1.93e-07,3;UBERON:0006524,1.93e-07,3;UBERON:0008874,1.93e-07,3;UBERON:0002169,1.93e-07,3;UBERON:0004894,1.93e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,1.09776335516636,1.06023814657188,0.232387885739037,0.621966330092223,0.504641701751257,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0.277765335475589,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.170453254832202,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0.111443384277478,1.98895302764489,0,0,0,0,0,0,1.6480387422676,0.211125408127993,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0.260427761085233,0,0,2.38966241399549,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0.421996129056054,0.163232808159148,0.282706142867882,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0,0,0.261177619741208,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0.39961921916426,0.576361668616424,0,0,0.14405479798815,0,0.471388069233591,0.271808412147228,0.313808538937,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0.260994291965212,0.453411851024545,0,0,0.179088841081487,0,0,0,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0.183428598521679,0.924205329202706,0,0,0,0,0.20170506870352,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,1.41832609060762,0.333694205676207,0,0,0,0,0.215927591218621,0,0,0.158013611732727,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,1.41157948686277,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.327796715891087,0.126698501011437,0.305966489225945,0.26721740526556,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0,1.45771421354797,0,0,0,0,0,0,0,1.05824249194267,0,0,0.359300808426348,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,1.09776335516636,1.06023814657188,0.232387885739037,0.621966330092223,0.504641701751257,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0.277765335475589,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.170453254832202,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0.111443384277478,1.98895302764489,0,0,0,0,0,0,1.6480387422676,0.211125408127993,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0.260427761085233,0,0,2.38966241399549,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0.421996129056054,0.163232808159148,0.282706142867882,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0,0,0.261177619741208,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0.39961921916426,0.576361668616424,0,0,0.14405479798815,0,0.471388069233591,0.271808412147228,0.313808538937,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0.260994291965212,0.453411851024545,0,0,0.179088841081487,0,0,0,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0.183428598521679,0.924205329202706,0,0,0,0,0.20170506870352,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,1.41832609060762,0.333694205676207,0,0,0,0,0.215927591218621,0,0,0.158013611732727,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,1.41157948686277,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.327796715891087,0.126698501011437,0.305966489225945,0.26721740526556,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0,1.45771421354797,0,0,0,0,0,0,0,1.05824249194267,0,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p@chr9:36925085..36925090,+ | |short_description=p@chr9:36925085..36925090,+ | ||
}} | }} |
Latest revision as of 01:57, 1 August 2015
Short description: | p@chr9:36925085..36925090, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:36925085..36925090, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 5.62e-19 | 1 |
lower urinary tract cell | 5.62e-19 | 1 |
embryonic stem cell | 3.35e-15 | 5 |
pneumocyte | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 5.62e-19 | 1 |
wall of urinary bladder | 5.62e-19 | 1 |
mucosa of urinary bladder | 5.62e-19 | 1 |
bronchoalveolar duct junction | 1.57e-10 | 2 |
alveolar duct | 1.57e-10 | 2 |
bronchiole | 1.57e-10 | 2 |
urinary bladder | 3.58e-10 | 2 |
lower urinary tract | 3.58e-10 | 2 |
pulmonary alveolus epithelium | 1.93e-07 | 3 |
alveolus | 1.93e-07 | 3 |
pulmonary lobule | 1.93e-07 | 3 |
lobule | 1.93e-07 | 3 |
alveolus of lung | 1.93e-07 | 3 |
alveolar system | 1.93e-07 | 3 |
pulmonary acinus | 1.93e-07 | 3 |
alveolar sac | 1.93e-07 | 3 |
alveolar wall | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.74e-12 | 14 |
lung adenocarcinoma | 1.57e-10 | 2 |
carcinoma | 4.92e-08 | 106 |