FFCP PHASE1:Hg19::chr9:35754350..35754382,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=692094 | |EntrezGene=entrezgene:692094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=29663 | |HGNC=HGNC:29663 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q1L6U9 | |UniProt=uniprot:Q1L6U9 | ||
|association_with_transcript=-76bp_to_NM_001044264_5end | |association_with_transcript=-76bp_to_NM_001044264_5end | ||
|cluster_id=chr9:35754350..35754382,- | |||
|coexpression_cluster_id=C254 | |coexpression_cluster_id=C254 | ||
|description=CAGE_peak_4_at_MSMP_5end | |description=CAGE_peak_4_at_MSMP_5end |
Revision as of 01:52, 1 August 2015
Short description: | p4@MSMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MSMP_5end |
Coexpression cluster: | C254_prostate_rhabdomyosarcoma_seminal_Fibroblast_transitionalcell_Smooth_Iris |
Association with transcript: | -76bp_to_NM_001044264_5end |
EntrezGene: | 692094 |
HGNC: | 29663 |
UniProt: | Q1L6U9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@MSMP |
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5
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 1.17e-33 | 6 |
thoracic aorta endothelial cell | 5.56e-26 | 2 |
blood vessel endothelial cell | 1.81e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.81e-25 | 18 |
endothelial cell of vascular tree | 2.27e-19 | 24 |
endothelial cell | 3.02e-13 | 36 |
meso-epithelial cell | 8.78e-11 | 45 |
aortic endothelial cell | 1.32e-09 | 6 |
lining cell | 1.46e-08 | 58 |
barrier cell | 1.46e-08 | 58 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
segment of aorta | 5.56e-26 | 2 |
thoracic aorta | 5.56e-26 | 2 |
blood vessel endothelium | 1.81e-25 | 18 |
endothelium | 1.81e-25 | 18 |
cardiovascular system endothelium | 1.81e-25 | 18 |
vein | 7.17e-23 | 9 |
venous blood vessel | 7.17e-23 | 9 |
venous system | 7.17e-23 | 9 |
simple squamous epithelium | 4.90e-21 | 22 |
squamous epithelium | 1.23e-18 | 25 |
Showing 1 to 10 of 18 entries