FFCP PHASE1:Hg19::chr9:139091385..139091433,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:139091385..139091433,-
|short_description=p@chr9:139091385..139091433,-
|description=CAGE_peak_at_chr9:139091385..139091433,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:139091385..139091433,- | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_at_chr9:139091385..139091433,- | |||
|id=chr9:139091385..139091433,- | |||
|ontology_enrichment_celltype=CL:0000242!8.82e-51!2;CL:0000167!1.26e-25!1;CL:0000164!1.26e-25!1;CL:0000502!1.26e-25!1;CL:0000172!1.26e-25!1;CL:0000173!1.26e-25!1;CL:0002351!1.26e-25!1;CL:0000312!4.92e-21!5;CL:0000240!1.03e-17!6;CL:0000311!1.03e-17!6;CL:0000079!1.03e-17!6;CL:0000237!1.03e-17!6;CL:0000036!1.03e-17!6;CL:0000357!1.03e-17!6;CL:0000114!1.03e-17!6;CL:0002319!3.06e-15!25;CL:0000362!1.51e-13!8;CL:0000095!1.57e-12!17;CL:0000123!1.57e-12!17;CL:0002159!1.04e-08!13;CL:0000133!5.69e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000123;5.68e-99;2!CL:0000242;5.68e-99;2!CL:0000312;1.81e-40;5!CL:0000240;5.98e-34;6!CL:0000311;5.98e-34;6!CL:0000079;5.98e-34;6!CL:0000237;5.98e-34;6!CL:0000047;8.10e-26;2!CL:0000362;4.59e-23;9!CL:0002319;2.15e-17;25!CL:0002159;2.95e-15;14!CL:0000095;1.55e-11;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.68e-99,2;CL:0000312,1.81e-40,5;CL:0000240,5.98e-34,6;CL:0000311,5.98e-34,6;CL:0000079,5.98e-34,6;CL:0000237,5.98e-34,6;CL:0000036,5.98e-34,6;CL:0000357,5.98e-34,6;CL:0000114,5.98e-34,6;CL:0000362,4.59e-23,9;CL:0002319,2.09e-17,25;CL:0002159,2.95e-15,14;CL:0000095,1.55e-11,17;CL:0000123,1.55e-11,17;CL:0000133,3.25e-08,59;CL:0000047,1.69e-07,8;CL:0000221,6.51e-07,72;CL:0002077,6.75e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;5.98e-34;6!CL:0000114;5.98e-34;6 | |||
|ontology_enrichment_disease=DOID:4430!1.26e-25!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!1.17e-55!4;UBERON:0010133!1.17e-55!4;UBERON:0001905!5.15e-50!2;UBERON:0002757!5.15e-50!2;UBERON:0010134!5.15e-50!2;UBERON:0002784!5.15e-50!2;UBERON:0005408!5.15e-50!2;UBERON:0001899!5.15e-50!2;UBERON:0001894!3.19e-32!7;UBERON:0006222!3.19e-32!7;UBERON:0000007!1.37e-13!2;UBERON:0001003!3.76e-08!14;UBERON:0007376!3.76e-08!14;UBERON:0007383!3.76e-08!14;UBERON:0001017!1.36e-07!82;UBERON:0005743!2.97e-07!86;UBERON:0004121!4.67e-07!169;UBERON:0002368!5.19e-07!35;UBERON:0000924!6.81e-07!173;UBERON:0006601!6.81e-07!173;UBERON:0003056!8.65e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.10e-26;2!UBERON:0002757;8.10e-26;2!UBERON:0010134;8.10e-26;2!UBERON:0005408;8.10e-26;2!UBERON:0001899;8.10e-26;2!UBERON:0001003;2.57e-14;15!UBERON:0007376;2.57e-14;15!UBERON:0003296;1.21e-13;4!UBERON:0010133;1.21e-13;4!UBERON:0002784;1.21e-13;4!UBERON:0001894;2.26e-08;7!UBERON:0010371;3.37e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.18e-26,2;UBERON:0002757,9.18e-26,2;UBERON:0010134,9.18e-26,2;UBERON:0005408,9.18e-26,2;UBERON:0001899,9.18e-26,2;UBERON:0001003,2.58e-14,15;UBERON:0007376,2.58e-14,15;UBERON:0007383,2.58e-14,15;UBERON:0003296,1.29e-13,4;UBERON:0010133,1.29e-13,4;UBERON:0002784,1.29e-13,4;UBERON:0001894,2.35e-08,7;UBERON:0006222,2.35e-08,7 | |||
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|short_description=p@chr9:139091385..139091433,- | |||
}} | }} |
Latest revision as of 00:16, 1 August 2015
Short description: | p@chr9:139091385..139091433, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:139091385..139091433, - |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr9:139091385..139091433- |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.68e-99 | 2 |
keratinocyte | 1.81e-40 | 5 |
stratified squamous epithelial cell | 5.98e-34 | 6 |
keratin accumulating cell | 5.98e-34 | 6 |
stratified epithelial cell | 5.98e-34 | 6 |
keratinizing barrier epithelial cell | 5.98e-34 | 6 |
epithelial fate stem cell | 5.98e-34 | 6 |
stratified epithelial stem cell | 5.98e-34 | 6 |
surface ectodermal cell | 5.98e-34 | 6 |
epidermal cell | 4.59e-23 | 9 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
---|---|---|
pineal body | 9.18e-26 | 2 |
regional part of epithalamus | 9.18e-26 | 2 |
secretory circumventricular organ | 9.18e-26 | 2 |
circumventricular organ | 9.18e-26 | 2 |
epithalamus | 9.18e-26 | 2 |
skin epidermis | 2.58e-14 | 15 |
outer epithelium | 2.58e-14 | 15 |
enveloping layer of ectoderm | 2.58e-14 | 15 |
gland of diencephalon | 1.29e-13 | 4 |
neuroendocrine gland | 1.29e-13 | 4 |
Showing 1 to 10 of 13 entries