FFCP PHASE1:Hg19::chr9:137622273..137622284,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:137622273..137622284,+ to FFCP PHASE1:Hg19::chr9:137622273..137622284,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:137622273..137622284,+ | |||
|coexpression_cluster_id=C396 | |||
|description=CAGE_peak_at_chr9:137622273..137622284,+ | |||
|id=chr9:137622273..137622284,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.26e-25!180;CL:0000057!8.16e-19!75;CL:0002334!2.68e-08!12;CL:0000192!9.25e-08!42;CL:0000514!9.25e-08!42;CL:0000680!1.58e-07!57;CL:0000056!1.58e-07!57;CL:0000355!1.58e-07!57;CL:0000499!1.81e-07!27;CL:0000183!1.89e-07!59;CL:0000187!3.08e-07!54;CL:0000222!4.73e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.11e-16;12!CL:0000499;1.39e-09;28!CL:0000349;3.26e-09;19!CL:0000327;5.87e-09;15!CL:0000153;6.86e-08;9!CL:0000447;6.86e-08;9!CL:0000057;1.12e-07;73!CL:0002580;8.38e-07;3!CL:0002579;9.29e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.21e-19,76;CL:0002334,4.92e-16,12;CL:0000499,1.01e-09,28;CL:0000349,2.39e-09,19;CL:0000327,5.93e-09,15;CL:0002320,3.39e-08,361;CL:0000134,3.47e-08,354;CL:0000153,5.40e-08,9;CL:0000447,5.40e-08,9;CL:0000048,2.97e-07,427;CL:0000723,6.83e-07,433;CL:0000058,8.23e-07,6;CL:0000138,8.23e-07,6;CL:0002580,8.57e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000478!3.67e-09!24;UBERON:0004872!4.72e-09!84;UBERON:0005631!6.62e-09!14;UBERON:0000158!6.62e-09!14;UBERON:0001637!1.71e-08!42;UBERON:0003509!1.71e-08!42;UBERON:0004572!1.71e-08!42;UBERON:0002385!4.83e-08!63;UBERON:0001015!4.83e-08!63;UBERON:0000383!4.83e-08!63;UBERON:0000914!4.92e-08!83;UBERON:0002329!4.92e-08!83;UBERON:0003077!4.92e-08!83;UBERON:0003059!4.92e-08!83;UBERON:0007282!4.92e-08!83;UBERON:0009618!4.92e-08!83;UBERON:0007285!4.92e-08!83;UBERON:0001134!8.00e-08!61;UBERON:0002036!8.00e-08!61;UBERON:0003082!8.00e-08!61;UBERON:0004290!1.47e-07!70;UBERON:0002049!3.00e-07!79;UBERON:0007798!3.00e-07!79;UBERON:0004573!6.50e-07!33;UBERON:0004571!6.50e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.13e-11;9!UBERON:0000042;1.13e-11;9!UBERON:0003688;4.81e-11;6!UBERON:0002358;4.81e-11;6!UBERON:0003684;4.81e-11;6!UBERON:0001178;4.81e-11;6!UBERON:0000478;2.93e-08;24!UBERON:0002384;5.78e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.72e-11,6;UBERON:0002358,3.72e-11,6;UBERON:0003684,3.72e-11,6;UBERON:0001178,3.72e-11,6;UBERON:0002384,6.68e-09,371;UBERON:0004457,2.14e-08,12;UBERON:0000042,2.14e-08,12;UBERON:0000478,2.21e-08,24;UBERON:0005631,4.78e-07,14;UBERON:0000158,4.78e-07,14 | |||
|phase1_expression=1.45342703416445,6.63711624062048,1.9733616573436,3.00219895059391,2.68176656656373,2.61701557230111,0,0,0,0.245733936501509,0,0.218441372130172,3.4289707169699,0.123766352960047,0,1.34465029290355,1.20538905604795,0,0.975865597581014,0.246242116153576,1.02000345622126,0.940364164434263,0,0.547497700291537,0.87879847716362,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0.767175371061182,1.44575660953827,1.50401373190767,1.73815822752988,1.5905718941022,7.29952305453954,0.283604451492204,0.443458794925128,0.43917392846563,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.825354125820202,0.208994966536811,0,0,0,0,0,0,0,4.0507097394088,0,0,0,1.53316637465883,0,0.366403487860815,0,0,0,5.4666914686485,1.13967460498122,0.529636723252875,4.58938593198102,0.354668382198357,1.68203280042692,1.06748995729705,2.22000793575444,0,0.942974704487816,0.490385709340376,0.908144565869588,4.03323147135999,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0.204154171254893,0.491337269247072,0.309977343527296,0,2.47266929278557,0,3.59309070908119,0.168336113954066,0.250237039743928,0,0.438977620880838,2.14541457059314,0.45071417671979,0.680593098960126,1.07633781413317,1.06778694409284,2.33125091275518,2.10063767259082,0.309157587715317,2.31876486041066,0.37223371266318,2.53164498361899,1.46155507741798,1.7670364197088,1.74894807420369,1.45481451136931,4.26011511019937,0.705264687593482,0.169560592310488,0,0,0,0,0,0,0.310983165046111,0,0,0,1.92972281457866,0,0,0.721879481669586,0.473227200159376,0,0,0.55146986366197,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,1.2347220339942,5.88034845542168,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,1.30788020649984,0,1.80980402060889,3.57656445851882,0.845302752556,0.797814349754612,2.08014873822732,0.257207374262142,0,0.266422179016099,2.43062589218851,9.76718889704597,2.46972101034231,0,3.19852753868291,0.791951872933429,0.602878754119172,0,0.99972991182057,0,0,0,0.479249710983165,0,0,0.868687840005475,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0.542530047399471,2.9115920614313,3.92543775353756,2.05013139544115,1.99140405487612,0,0,1.03473071292505,0.664225598535437,0.737476674166813,0.695068915744663,0.195801157462741,3.43143423810856,0,0,0,0.909382714338778,8.32177197552485,6.04780586659361,3.47350930946288,3.22270143904931,9.82310330515758,3.07533958213682,3.07024349440022,6.4341568457443,1.48418066444991,1.23367755042124,1.9531789784444,0,2.07701771673448,1.16210378459959,0,0.601519410909855,0,0.918515585316854,0.728364672026868,1.31124414959424,0,0,0,0,0.105551628892876,0,0,0.215915916102139,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.27470839445503,0.577566499444116,0,0,0,0,0,0.307007349452259,0,0,0.725083469571143,0.426133137080504,0.623224249527161,0,0,0,0.10115778085555,0.929691098594572,4.09256050879832,0.6970372701606,0,0,0.869932992075073,0.37064843820784,0.286249773483982,0,0.949138274156178,0.762520775695299,0.511795582622668,0,0.318203247925937,0.78494864019923,0.539617372749944,1.92175920815238,0.824686816419805,0.202182481573316,0,0,0.48763373908959,0.731140468893853,1.05650146756755,0.272999822815972,3.25232493493539,0,0,1.99031692572366,0.438450885253763,0.578775534266688,0,0.202910376962704,0.30982349809975,0.281695602532241,0.430234056612155,1.08073945114433,1.426684205925,0,1.26664581178598,1.64647446479951,0.379473173765715,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,1.90995587790152,0.593929361665277,1.22864280839693,0,0,0.111308705022906,0,0,0.996239941255349,0,0,0.20453736500431,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.538651809526579,0.455768223388005,0,0,0,1.5950057986596,0.732780747214898,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,1.22206028986725,0,0,0,0,3.21031058919516,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.343972064943233,0.19351266257817,0.219267951258557,0.246346371159628,0.193978032976839,0,2.93774963014692,0,0,0,0,0.0801588202515337,0.426905989478705,3.9961921916426,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,1.08599920350743,1.72844298240254,0,0,0,1.87426823963964,0.339936274560377,0,0,0,0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| ||
|short_description=p@chr9:137622273..137622284,+ | |||
}} | }} |
Latest revision as of 00:06, 1 August 2015
Short description: | p@chr9:137622273..137622284, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:137622273..137622284, + |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.21e-19 | 76 |
preadipocyte | 4.92e-16 | 12 |
stromal cell | 1.01e-09 | 28 |
extraembryonic cell | 2.39e-09 | 19 |
extracellular matrix secreting cell | 5.93e-09 | 15 |
connective tissue cell | 3.39e-08 | 361 |
mesenchymal cell | 3.47e-08 | 354 |
GAG secreting cell | 5.40e-08 | 9 |
carbohydrate secreting cell | 5.40e-08 | 9 |
multi fate stem cell | 2.97e-07 | 427 |
somatic stem cell | 6.83e-07 | 433 |
chondroblast | 8.23e-07 | 6 |
chondrocyte | 8.23e-07 | 6 |
preadipocyte of the breast | 8.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.72e-11 | 6 |
peritoneum | 3.72e-11 | 6 |
abdominal cavity | 3.72e-11 | 6 |
visceral peritoneum | 3.72e-11 | 6 |
connective tissue | 6.68e-09 | 371 |
cavity lining | 2.14e-08 | 12 |
serous membrane | 2.14e-08 | 12 |
extraembryonic structure | 2.21e-08 | 24 |
extraembryonic membrane | 4.78e-07 | 14 |
membranous layer | 4.78e-07 | 14 |