FFCP PHASE1:Hg19::chr9:137622234..137622248,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:137622234..137622248,+ | |||
|coexpression_cluster_id=C396 | |||
|description=CAGE_peak_at_chr9:137622234..137622248,+ | |description=CAGE_peak_at_chr9:137622234..137622248,+ | ||
|id=chr9:137622234..137622248,+ | |id=chr9:137622234..137622248,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.72e-28!180;CL:0000057!4.11e-22!75;CL:0000183!1.18e-09!59;CL:0000680!4.46e-09!57;CL:0000056!4.46e-09!57;CL:0000355!4.46e-09!57;CL:0000187!7.06e-09!54;CL:0000144!1.35e-08!625;CL:0002334!1.84e-08!12;CL:0000222!3.82e-08!119;CL:0002371!1.11e-07!591;CL:0000048!2.81e-07!430;CL:0000393!3.67e-07!60;CL:0000211!3.67e-07!60;CL:0002620!6.33e-07!23;CL:0000723!9.12e-07!436 | |ontology_enrichment_celltype=CL:0000055!4.72e-28!180;CL:0000057!4.11e-22!75;CL:0000183!1.18e-09!59;CL:0000680!4.46e-09!57;CL:0000056!4.46e-09!57;CL:0000355!4.46e-09!57;CL:0000187!7.06e-09!54;CL:0000144!1.35e-08!625;CL:0002334!1.84e-08!12;CL:0000222!3.82e-08!119;CL:0002371!1.11e-07!591;CL:0000048!2.81e-07!430;CL:0000393!3.67e-07!60;CL:0000211!3.67e-07!60;CL:0002620!6.33e-07!23;CL:0000723!9.12e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.39e-15;19!CL:0002334;2.69e-12;12!CL:0000134;1.27e-09;55!CL:0000048;2.84e-08;58!CL:0002569;4.96e-08;6!CL:0000723;2.24e-07;61!CL:0000057;4.31e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.91e-20,76;CL:0000349,2.50e-15,19;CL:0002334,2.24e-12,12;CL:0000048,2.62e-10,427;CL:0000723,8.61e-10,433;CL:0000034,3.94e-09,441;CL:0002320,3.16e-08,361;CL:0002569,3.74e-08,6;CL:0000134,5.89e-08,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.47e-10!83;UBERON:0002329!8.47e-10!83;UBERON:0003077!8.47e-10!83;UBERON:0003059!8.47e-10!83;UBERON:0007282!8.47e-10!83;UBERON:0009618!8.47e-10!83;UBERON:0007285!8.47e-10!83;UBERON:0002385!1.85e-09!63;UBERON:0001015!1.85e-09!63;UBERON:0000383!1.85e-09!63;UBERON:0004290!2.01e-09!70;UBERON:0004872!2.83e-09!84;UBERON:0001134!2.86e-09!61;UBERON:0002036!2.86e-09!61;UBERON:0003082!2.86e-09!61;UBERON:0000478!3.90e-09!24;UBERON:0000486!1.78e-07!82;UBERON:0005631!2.41e-07!14;UBERON:0000158!2.41e-07!14;UBERON:0001637!3.82e-07!42;UBERON:0003509!3.82e-07!42;UBERON:0004572!3.82e-07!42;UBERON:0000490!6.18e-07!138;UBERON:0002049!7.36e-07!79;UBERON:0007798!7.36e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;8.71e-13;24!UBERON:0003104;2.32e-09;7!UBERON:0009142;2.32e-09;7!UBERON:0003422;4.96e-08;6!UBERON:0005631;1.02e-07;10!UBERON:0000158;1.02e-07;10!UBERON:0001013;1.93e-07;14!UBERON:0002384;4.93e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,9.80e-13,24;UBERON:0002384,2.61e-08,371;UBERON:0005631,2.84e-08,14;UBERON:0000158,2.84e-08,14;UBERON:0003422,3.74e-08,6;UBERON:0004871,1.51e-07,8;UBERON:0001013,1.61e-07,14 | |||
|phase1_expression=0.908391896352783,5.99481466894753,0.986680828671798,1.0007329835313,6.25745532198203,5.23403114460221,15.1979926900986,0,0,0,0.697801167972428,1.96597234917155,5.01157258634062,0,0.331397375727916,1.34465029290355,0,0.730310090387373,0.975865597581014,0.123121058076788,2.65200898617529,2.5076377718247,0,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.383587685530591,1.44575660953827,0,3.47631645505977,0.795285947051099,12.6525066278685,0.283604451492204,2.21729397462564,1.22968699970376,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0.838998872419812,0.275118041940067,0.417989933073621,0,0,0,0,0,0.24406205754817,0,1.62028389576352,0,0,0,1.53316637465883,0,0.366403487860815,0,0,0,4.96971951695318,1.39293562831038,1.45650098894541,10.3261183469573,2.83734705758686,2.80338800071154,0,5.67335361359468,0,1.88594940897563,0.817309515567294,2.4217188423189,3.45705554687999,0.468642863667593,0,0.570471821544449,0.149448680551801,0.23486899728753,0,0.140450806702248,0.204154171254893,0.122834317311768,0.619954687054593,1.18800285728205,1.7308685049499,0,3.59309070908119,0.168336113954066,0.625592599359821,0,0.877955241761676,3.37136575378922,0.300476117813194,0.680593098960126,5.202299434977,1.49490172172997,1.27159140695737,3.90118424909723,0.721367704669072,3.86460810068444,0.558350568994769,1.5189869901714,1.46155507741798,3.28163906517349,0.920498986422993,2.42469085228218,6.03516307278244,1.20902517873168,0.67824236924195,0,0,0,0.121973706129595,0,0.464775771478074,0.10366105501537,0,0,1.56449532329816,1.92972281457866,0,0.928735856063958,0.721879481669586,0.354920400119532,1.18009283054671,0,1.10293972732394,0.653638332277218,0.474541238222193,0.404493924480493,0.784885860501384,0,0,4.20725321410337,2.057870056657,2.94017422771084,0,0,0,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0,0,0.325808305310325,1.03993478527958,0,0.231860809950154,1.05667824812239,0.144366447761074,0,0,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.4400297149257,1.68053230485111,3.57656445851882,0,1.06375246633948,1.04007436911366,0,0,0.532844358032199,3.57444984145369,11.3950537132203,4.11620168390384,0.325736184293735,3.909311436168,1.58390374586686,0,0.871533458600294,0.799783929456456,0,0,0,1.4377491329495,4.59447743336456,0,1.01346914667305,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.271265023699736,4.78332981520856,6.78030157429215,2.83864347061082,2.45996971484698,0,2.27407504055985,0,3.98535359121262,2.02806085395873,0.868836144680828,1.17480694477644,5.49029478097369,0,0,0,0,3.32870879020994,9.97887967987945,2.23297027036899,3.52962538562544,10.6650835884568,2.94720043288112,1.53512174720011,5.79074116116987,8.90508398669946,2.46735510084249,2.48586415438378,0.164254312027618,1.03850885836724,1.97557643381931,0,0.200506470303285,0,1.26295892981067,1.45672934405374,2.36023946926963,0,0,0,0,0,0,0.170093705276516,0.863663664408557,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.206082023295445,1.00726411300178,0.330037999682352,0,0,4.82051789532479,0.096670718292122,0.462145851343933,0.460511024178389,0.137836572484531,0.966782203814463,0.435050081742686,0.511359764496605,1.60257664164127,0.330569830721956,0.384380134730212,0.127612712494584,0.2023155617111,1.85938219718914,9.4443704049192,0,1.23213432070436,0,0,0.18532421910392,0,0,0.316379424718726,1.71567174531442,0.255897791311334,0,0.636406495851874,1.56989728039846,1.07923474549989,4.66712950551293,1.17812402345686,0,1.58510321173008,0.421258456238981,0,0.974853958525138,1.05650146756755,0.272999822815972,4.24216295861138,2.26016233240486,0,0,0.876901770507525,0,1.9676842561399,0.202910376962704,0.92947049429925,0.845086807596724,0.717056761020258,1.57198465620994,1.78335525740625,0.354761064070598,0.844430541190656,2.63435914367922,0,1.04980416073495,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,1.13654458722565,2.3874448473769,0.890894042497916,3.99308912729002,0,0,0.222617410045812,0,0,0.996239941255349,0,0,0.715880777515084,0,1.24415835064723,0,0,0,0.197286811273867,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0.569710279235006,0,0.0897576444097721,0,2.55200927785536,0.915975934018623,6.92945208824225,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.290268993867255,0.219267951258557,0.0821154570532092,0.0969890164884194,0,1.35588444468319,0.137041924646751,0,0,0,0,0.64035898421805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| ||
|short_description=p@chr9:137622234..137622248,+ | |short_description=p@chr9:137622234..137622248,+ | ||
}} | }} |
Latest revision as of 00:06, 1 August 2015
Short description: | p@chr9:137622234..137622248, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:137622234..137622248, + |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.91e-20 | 76 |
extraembryonic cell | 2.50e-15 | 19 |
preadipocyte | 2.24e-12 | 12 |
multi fate stem cell | 2.62e-10 | 427 |
somatic stem cell | 8.61e-10 | 433 |
stem cell | 3.94e-09 | 441 |
connective tissue cell | 3.16e-08 | 361 |
mesenchymal stem cell of umbilical cord | 3.74e-08 | 6 |
mesenchymal cell | 5.89e-08 | 354 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 9.80e-13 | 24 |
connective tissue | 2.61e-08 | 371 |
extraembryonic membrane | 2.84e-08 | 14 |
membranous layer | 2.84e-08 | 14 |
mesenchyme of umbilical cord | 3.74e-08 | 6 |
somatic layer of lateral plate mesoderm | 1.51e-07 | 8 |
adipose tissue | 1.61e-07 | 14 |