FFCP PHASE1:Hg19::chr9:127563885..127563899,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:127563885..127563899,+ | |||
|coexpression_cluster_id=C2018 | |||
|description=CAGE_peak_at_chr9:127563885..127563899,+ | |description=CAGE_peak_at_chr9:127563885..127563899,+ | ||
|id=chr9:127563885..127563899,+ | |id=chr9:127563885..127563899,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000669;2.73e-07;4!CL:0000128;3.78e-07;7!CL:0000126;3.78e-07;7!CL:0000127;3.78e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,2.46e-07,4;CL:0000128,3.84e-07,7;CL:0000126,3.84e-07,7;CL:0000127,3.84e-07,7;CL:0002453,3.84e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.02e-13!347;UBERON:0000468!9.01e-09!659;UBERON:0000475!4.08e-08!365;UBERON:0000922!5.28e-08!612;UBERON:0000064!5.42e-08!219;UBERON:0000062!4.34e-07!511 | |ontology_enrichment_uberon=UBERON:0000481!3.02e-13!347;UBERON:0000468!9.01e-09!659;UBERON:0000475!4.08e-08!365;UBERON:0000922!5.28e-08!612;UBERON:0000064!5.42e-08!219;UBERON:0000062!4.34e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;4.93e-08;5!UBERON:0002216;4.93e-08;5!UBERON:0011134;4.93e-08;5!UBERON:0002209;4.93e-08;5!UBERON:0002213;4.93e-08;5!UBERON:0007844;4.93e-08;5!UBERON:0011138;4.93e-08;5!UBERON:0001130;4.93e-08;5!UBERON:0001066;4.93e-08;5!UBERON:0001468;4.93e-08;5!UBERON:0006876;1.23e-07;11!UBERON:0000020;3.02e-07;23!UBERON:0001032;8.22e-07;24!UBERON:0004456;8.22e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.84e-08,5;UBERON:0002216,2.84e-08,5;UBERON:0011134,2.84e-08,5;UBERON:0002209,2.84e-08,5;UBERON:0002213,2.84e-08,5;UBERON:0005856,2.84e-08,5;UBERON:0005866,2.84e-08,5;UBERON:0005863,2.84e-08,5;UBERON:0007844,2.84e-08,5;UBERON:0011138,2.84e-08,5;UBERON:0001130,2.84e-08,5;UBERON:0001066,2.84e-08,5;UBERON:0001468,2.84e-08,5;UBERON:0006876,1.30e-07,11;UBERON:0000020,6.44e-07,24;UBERON:0001032,6.44e-07,24;UBERON:0004456,6.44e-07,24;UBERON:0004905,8.19e-07,8;UBERON:0000982,8.19e-07,8;UBERON:0004770,8.19e-07,8 | |||
|phase1_expression=0,2.78330681058278,0.281908808191942,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,3.58922423584135,1.98838425436749,0.672325146451775,0,0,0,1.47745269692145,4.89601658986207,1.25381888591235,0.85870796139317,4.65373045247806,3.26410862946487,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,0.434539556882471,0,0,2.74150969775797,3.99112915432615,2.28370442802128,0.785874452986276,1.82147644146271,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0.286836620748814,0,0.560677600142307,0,0.49333509683432,0,0,0,7.56787138224657,3.45705554687999,0.70296429550139,2.80944069147288,0,3.13842229158782,1.05691048779388,0.323745888736263,0.140450806702248,0.204154171254893,0.859840221182376,1.85986406116378,0,2.47266929278557,0,1.43723628363248,0,0.500474079487857,0,0,0,0.45071417671979,0,0.538168907066586,0.640672166455702,0.211931901159562,0,0,0,0.558350568994769,0,0,0,0.460249493211497,3.07127507955743,0,0,0.508681776931463,0,0,0,1.21973706129595,0.927708378250397,1.2781333715647,1.14027160516907,1.26160425437814,0,0,1.92972281457866,0,19.5034529773431,12.9938306700525,1.18306800039844,1.18009283054671,0.964044119533928,1.7647035637183,0.871517776369625,0.949082476444386,1.34831308160164,1.56977172100277,1.15424147083917,0.738155454624648,0,1.2347220339942,8.82052268313252,0,0,0,0,0.122988438543114,0.857839051492628,0,0,0,6.29601427078001,0.977424915930974,0,0,1.62302566965108,0.117408694235822,0.577465791044295,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,1.02827492703324,2.10240140490742,1.42913216315289,0.448524337381443,0.43596006883328,0.4400297149257,0,25.0359512096318,0.845302752556,0.797814349754612,1.04007436911366,0.771622122786426,2.83698264046557,0.266422179016099,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0,0,0,0,1.19812427745791,9.18895486672911,0,0.144781306667579,2.67119219315498,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,6.37995756939527,5.50187573165645,5.15403545029498,0.415941723061614,0.713715955188647,0.157702415033935,1.52283839490527,0.601892199455438,0,8.27784570340039,1.32845119707087,0.368738337083406,2.34585759063824,12.3354729201527,12.3531632571908,0,0,0,0,0,1.5119514666484,0,0,0,0,0,0,0,0.925258162815933,1.24293207719189,0.328508624055237,0.519254429183621,0.464841513839837,0,1.00253235151642,0.368323955743585,0.34444334449382,1.0925470080403,2.88473712910733,0.902399225814824,0.0770153371044148,0.784349769176855,1.46139224653261,0.633309773357254,1.13733384070897,0,0.215915916102139,1.54227252690289,2.70946437543853,9.03041592938736,0,0.831076008928724,0.671624264166535,0.219259876645935,0,0,0.328014645699706,0,0.206082023295445,2.47237555009527,0.660075999364704,0,0.650060246036521,0,7.0569624353249,0,0.307007349452259,1.24052915236078,0.644521469209642,2.17525040871343,0.767039646744908,3.82837753280971,0,0.384380134730212,0,0.4046311234222,0,0,0,0,0,0,0,0,2.97726695487734,0.316379424718726,0,0.511795582622668,0.855877976067841,0,0,1.43897966066652,3.56898138656871,0.942499218765491,0,0,0,2.43816869544795,0,0,0.136499911407986,1.27264888758341,0,0,0,0,1.15755106853338,5.24715801637306,0,0,0,0.717056761020258,0.491245205065606,0,1.77380532035299,0.844430541190656,2.63435914367922,1.13841952129715,2.44954304171488,0,0,0,0.0941438007767792,0.86101074534246,0,3.99087138183008,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.586164286206121,0,0,0,0,0,0,1.46508179271894,0.121360521749513,0.334330152832435,0,0,0,0,0.994147647766298,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0,2.45444838005172,0.615424027305347,0,0.0898683511473268,0,0,2.95930216910801,0,0,0,0.556608588971108,0,0,0,2.17499872630438,0.910347586283997,0,0,0,0,0.868124974666461,0,0,0,0.884634079449797,0.591095237907095,1.53569778007781,0,5.15867853830832,4.38616473471643,0.341826167541004,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0.432777279484182,2.98578579323551,0.442287822516696,1.22206028986725,0,0,0,0.067401132980677,3.21031058919516,0.468528891450678,2.18945747058799,0,0.242780379534093,0.789168805698781,0,0.30607276163049,2.59064976476801,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0.173559738335131,0.489961987071888,0.261177619741208,0.873633341210151,0,0.387025325156341,0.438535902517113,0.164230914106418,1.84279131327997,0,2.48578814858586,0,0,0.316553979779393,0.391102765469606,0.0801588202515337,0.640358984218058,0.39961921916426,0,0.1145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| ||
|short_description=p@chr9:127563885..127563899,+ | |short_description=p@chr9:127563885..127563899,+ | ||
}} | }} |
Latest revision as of 22:39, 31 July 2015
Short description: | p@chr9:127563885..127563899, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:127563885..127563899, + |
Coexpression cluster: | C2018_Pericytes_Mesenchymal_large_cervical_skeletal_Hair_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 2.46e-07 | 4 |
oligodendrocyte | 3.84e-07 | 7 |
macroglial cell | 3.84e-07 | 7 |
astrocyte | 3.84e-07 | 7 |
oligodendrocyte precursor cell | 3.84e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 2.84e-08 | 5 |
symphysis | 2.84e-08 | 5 |
nonsynovial joint | 2.84e-08 | 5 |
fibrous joint | 2.84e-08 | 5 |
cartilaginous joint | 2.84e-08 | 5 |
developing mesenchymal condensation | 2.84e-08 | 5 |
pre-cartilage condensation | 2.84e-08 | 5 |
cartilaginous condensation | 2.84e-08 | 5 |
cartilage element | 2.84e-08 | 5 |
post-cranial axial skeletal system | 2.84e-08 | 5 |
vertebral column | 2.84e-08 | 5 |
intervertebral disk | 2.84e-08 | 5 |
intervertebral joint | 2.84e-08 | 5 |
vasculature of organ | 1.30e-07 | 11 |
sense organ | 6.44e-07 | 24 |
sensory system | 6.44e-07 | 24 |
entire sense organ system | 6.44e-07 | 24 |
articulation | 8.19e-07 | 8 |
skeletal joint | 8.19e-07 | 8 |
articular system | 8.19e-07 | 8 |