FFCP PHASE1:Hg19::chr9:127270402..127270409,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:127270402..127270409,- | |||
|coexpression_cluster_id=C788 | |||
|description=CAGE_peak_at_chr9:127270402..127270409,- | |||
|id=chr9:127270402..127270409,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;9.37e-99;1!UBERON:0004872;1.91e-15;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!2.19e-53!3;UBERON:0004854!2.19e-53!3;UBERON:0009034!2.19e-53!3;UBERON:0002095!2.19e-53!3;UBERON:0004782!2.19e-53!3;UBERON:0003281!2.19e-53!3;UBERON:0009664!2.19e-53!3;UBERON:0002296!2.19e-53!3;UBERON:0005602!2.19e-53!3;UBERON:0001179!2.19e-53!3;UBERON:0006293!2.19e-53!3;UBERON:0004177!3.85e-51!7;UBERON:0005057!6.80e-25!26;UBERON:0000945!8.12e-21!8;UBERON:0010039!8.12e-21!8;UBERON:0004457!2.94e-14!12;UBERON:0000042!2.94e-14!12;UBERON:0002370!3.79e-11!4;UBERON:0005058!3.79e-11!4;UBERON:0009113!3.79e-11!4;UBERON:0003295!3.79e-11!4;UBERON:0005562!3.79e-11!4;UBERON:0002075!7.42e-10!18;UBERON:0003887!1.37e-08!21;UBERON:0003351!7.25e-08!6;UBERON:0005172!2.81e-07!55;UBERON:0005173!2.81e-07!55;UBERON:0001041!4.16e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;5.96e-34;3!UBERON:0004177;5.15e-21;5!UBERON:0005057;5.15e-21;5!UBERON:0002331;2.73e-11;10!UBERON:0002075;7.60e-07;18!UBERON:0000922;7.98e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,5.96e-34,3;UBERON:0004854,5.96e-34,3;UBERON:0009034,5.96e-34,3;UBERON:0002095,5.96e-34,3;UBERON:0004782,5.96e-34,3;UBERON:0003281,5.96e-34,3;UBERON:0009664,5.96e-34,3;UBERON:0002296,5.96e-34,3;UBERON:0005602,5.96e-34,3;UBERON:0001179,5.96e-34,3;UBERON:0006293,5.96e-34,3;UBERON:0004177,1.91e-15,7;UBERON:0005057,1.91e-15,7;UBERON:0000945,1.07e-13,8;UBERON:0010039,1.07e-13,8;UBERON:0002331,2.73e-11,10;UBERON:0000358,2.73e-11,10;UBERON:0000307,2.73e-11,10;UBERON:0000091,2.73e-11,10;UBERON:0000087,2.73e-11,10;UBERON:0007010,2.73e-11,10;UBERON:0007806,2.73e-11,10;UBERON:0008780,2.73e-11,10;UBERON:0005728,2.73e-11,10;UBERON:0004457,1.33e-09,12;UBERON:0000042,1.33e-09,12;UBERON:0003887,1.33e-09,12;UBERON:0002075,7.60e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845855261818682,1.35361564744512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr9:127270402..127270409,- | |||
}} |
Latest revision as of 22:39, 31 July 2015
Short description: | p@chr9:127270402..127270409, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:127270402..127270409, - |
Coexpression cluster: | C788_umbilical_aorta_smooth_bladder_penis_colon_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 5.96e-34 | 3 |
gastrointestinal system mesentery | 5.96e-34 | 3 |
stomach region | 5.96e-34 | 3 |
mesentery | 5.96e-34 | 3 |
gastrointestinal system serosa | 5.96e-34 | 3 |
mesentery of stomach | 5.96e-34 | 3 |
gut mesentery | 5.96e-34 | 3 |
dorsal mesentery | 5.96e-34 | 3 |
dorsal mesogastrium | 5.96e-34 | 3 |
peritoneal cavity | 5.96e-34 | 3 |
spleen primordium | 5.96e-34 | 3 |
hemopoietic organ | 1.91e-15 | 7 |
immune organ | 1.91e-15 | 7 |
stomach | 1.07e-13 | 8 |
food storage organ | 1.07e-13 | 8 |
umbilical cord | 2.73e-11 | 10 |
blastocyst | 2.73e-11 | 10 |
blastula | 2.73e-11 | 10 |
bilaminar disc | 2.73e-11 | 10 |
inner cell mass | 2.73e-11 | 10 |
cleaving embryo | 2.73e-11 | 10 |
connecting stalk | 2.73e-11 | 10 |
inner cell mass derived epiblast | 2.73e-11 | 10 |
extraembryonic mesoderm | 2.73e-11 | 10 |
cavity lining | 1.33e-09 | 12 |
serous membrane | 1.33e-09 | 12 |
intraembryonic coelom | 1.33e-09 | 12 |
viscus | 7.60e-07 | 18 |