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FFCP PHASE1:Hg19::chr9:118701819..118701835,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr9:118701819..118701835,+
|coexpression_cluster_id=C679
|description=CAGE_peak_at_chr9:118701819..118701835,+
|description=CAGE_peak_at_chr9:118701819..118701835,+
|id=chr9:118701819..118701835,+
|id=chr9:118701819..118701835,+
|ontology_enrichment_celltype=CL:0000187!2.78e-27!54;CL:0000680!2.62e-25!57;CL:0000056!2.62e-25!57;CL:0000355!2.62e-25!57;CL:0000183!4.16e-24!59;CL:0000393!1.55e-23!60;CL:0000211!1.55e-23!60;CL:0000192!1.13e-21!42;CL:0000514!1.13e-21!42;CL:0000222!2.68e-15!119;CL:0000055!6.17e-14!180;CL:0000359!1.72e-12!32;CL:0002494!1.15e-09!16;CL:0000220!1.25e-07!246;CL:0002321!1.82e-07!248;CL:0002504!3.15e-07!3;CL:1000279!3.15e-07!3;CL:1000280!3.15e-07!3;CL:0000077!8.82e-07!19
|ontology_enrichment_celltype=CL:0000187!2.78e-27!54;CL:0000680!2.62e-25!57;CL:0000056!2.62e-25!57;CL:0000355!2.62e-25!57;CL:0000183!4.16e-24!59;CL:0000393!1.55e-23!60;CL:0000211!1.55e-23!60;CL:0000192!1.13e-21!42;CL:0000514!1.13e-21!42;CL:0000222!2.68e-15!119;CL:0000055!6.17e-14!180;CL:0000359!1.72e-12!32;CL:0002494!1.15e-09!16;CL:0000220!1.25e-07!246;CL:0002321!1.82e-07!248;CL:0002504!3.15e-07!3;CL:1000279!3.15e-07!3;CL:1000280!3.15e-07!3;CL:0000077!8.82e-07!19
|ontology_enrichment_celltype_v019=CL:0002504;9.07e-19;3!CL:1000279;9.07e-19;3!CL:1000280;9.07e-19;3!CL:0002195;9.49e-14;2!CL:0002571;9.49e-14;2!CL:0000187;2.84e-13;55!CL:0000746;2.95e-09;3!CL:0000594;7.27e-09;3!CL:0000393;1.32e-08;61!CL:0000211;1.32e-08;61!CL:0000192;1.35e-07;43!CL:0000077;1.43e-07;19!CL:0002379;1.85e-07;1!CL:0000737;3.85e-07;4!CL:0000342;4.46e-07;1!CL:0002557;4.46e-07;1!CL:0002565;4.46e-07;1!CL:0002599;4.46e-07;1!CL:0002594;4.89e-07;4
|ontology_enrichment_celltype_v019_2=CL:0002504,6.34e-19,3;CL:1000279,6.34e-19,3;CL:1000280,6.34e-19,3;CL:0000187,2.16e-18,55;CL:0000680,2.72e-17,58;CL:0000056,2.72e-17,58;CL:0000355,2.72e-17,58;CL:0000393,2.66e-16,61;CL:0000211,2.66e-16,61;CL:0002195,9.52e-14,2;CL:0002571,9.52e-14,2;CL:0000222,1.02e-13,121;CL:0000192,3.94e-12,43;CL:0000514,3.94e-12,43;CL:0000746,3.47e-09,3;CL:0000513,3.47e-09,3;CL:0000594,1.06e-08,3;CL:0000077,1.33e-07,19;CL:0002379,1.85e-07,1;CL:0002599,2.67e-07,1;CL:0000342,2.84e-07,1;CL:0002565,2.84e-07,1;CL:0002557,3.21e-07,1;CL:0000737,4.35e-07,4;CL:0002594,5.69e-07,4
|ontology_enrichment_development_v019=CL:0000355;3.90e-11;58!CL:0000513;2.95e-09;3!CL:0000514;1.35e-07;43!UBERON:0003124;4.46e-07;1
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:3620;1.85e-07;1!DOID:3565;1.85e-07;1
|ontology_enrichment_disease_v019_2=DOID:3620,1.85e-07,1;DOID:3565,1.85e-07,1
|ontology_enrichment_uberon=UBERON:0001134!5.49e-23!61;UBERON:0002036!5.49e-23!61;UBERON:0003082!5.49e-23!61;UBERON:0002385!6.13e-22!63;UBERON:0001015!6.13e-22!63;UBERON:0000383!6.13e-22!63;UBERON:0004290!3.82e-20!70;UBERON:0000486!6.65e-17!82;UBERON:0000914!1.32e-16!83;UBERON:0002329!1.32e-16!83;UBERON:0003077!1.32e-16!83;UBERON:0003059!1.32e-16!83;UBERON:0007282!1.32e-16!83;UBERON:0009618!1.32e-16!83;UBERON:0007285!1.32e-16!83;UBERON:0000490!1.34e-13!138;UBERON:0005256!1.22e-12!143;UBERON:0001637!9.14e-10!42;UBERON:0003509!9.14e-10!42;UBERON:0004572!9.14e-10!42;UBERON:0004872!1.52e-09!84;UBERON:0002100!2.30e-09!216;UBERON:0003914!2.66e-09!118;UBERON:0004573!8.24e-09!33;UBERON:0004571!8.24e-09!33;UBERON:0003104!2.23e-08!238;UBERON:0009142!2.23e-08!238;UBERON:0004535!2.72e-08!110;UBERON:0000481!3.48e-08!347;UBERON:0001009!7.32e-08!113;UBERON:0000948!4.28e-07!24;UBERON:0005498!4.28e-07!24;UBERON:0004140!4.28e-07!24;UBERON:0009881!4.28e-07!24;UBERON:0004141!4.28e-07!24;UBERON:0003084!4.28e-07!24;UBERON:0007005!4.28e-07!24;UBERON:0004139!4.28e-07!24;UBERON:0004291!4.28e-07!24;UBERON:0002049!4.95e-07!79;UBERON:0007798!4.95e-07!79;UBERON:0001135!5.21e-07!15;UBERON:0000483!7.64e-07!309
|ontology_enrichment_uberon_v019=UBERON:0002506;4.46e-07;1!UBERON:0001769;4.46e-07;1!UBERON:0001310;4.89e-07;4
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.43e-16,62;UBERON:0002036,5.43e-16,62;UBERON:0003082,5.43e-16,62;UBERON:0002385,2.11e-15,64;UBERON:0001015,2.11e-15,64;UBERON:0000383,2.11e-15,64;UBERON:0002329,1.33e-13,71;UBERON:0003059,1.33e-13,71;UBERON:0007282,1.33e-13,71;UBERON:0004290,1.33e-13,71;UBERON:0009618,1.33e-13,71;UBERON:0003077,2.25e-13,72;UBERON:0007285,2.25e-13,72;UBERON:0007524,3.75e-13,73;UBERON:0007503,3.97e-12,78;UBERON:0000486,3.16e-11,83;UBERON:0005256,1.31e-10,122;UBERON:0000490,2.62e-09,148;UBERON:0003104,2.60e-08,160;UBERON:0009142,2.60e-08,160;UBERON:0002100,8.92e-08,199;UBERON:0002506,2.84e-07,1;UBERON:0001769,2.84e-07,1;UBERON:0001310,5.69e-07,4
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|short_description=p@chr9:118701819..118701835,+
|short_description=p@chr9:118701819..118701835,+
}}
}}

Latest revision as of 22:10, 31 July 2015

Short description:p@chr9:118701819..118701835, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr9:118701819..118701835, +
Coexpression cluster:C679_Mesenchymal_Smooth_Cardiac_Hair_Fibroblast_Mesothelial_Skeletal
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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