FFCP PHASE1:Hg19::chr9:117840275..117840294,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:117840275..117840294,- | |||
|coexpression_cluster_id=C864 | |coexpression_cluster_id=C864 | ||
|description=CAGE_peak_at_chr9:117840275..117840294,- | |description=CAGE_peak_at_chr9:117840275..117840294,- | ||
|id=chr9:117840275..117840294,- | |id=chr9:117840275..117840294,- | ||
|ontology_enrichment_celltype=CL:0000138;7.38e-14;6!CL:0000153;1.40e-12;9!CL:0000447;1.40e-12;9!CL:0002620;1.46e-11;23!CL:0000135;1.17e-10;3!CL:0000388;1.17e-10;3!CL:0002582;2.12e-09;3!CL:0002334;1.45e-08;12!CL:0000048;1.85e-08;58!CL:0000499;8.29e-08;28!CL:0002583;1.45e-07;2!CL:0000134;2.35e-07;55!CL:0000327;3.09e-07;15!CL:0000723;5.04e-07;61 | |ontology_enrichment_celltype=CL:0002620!8.10e-13!23;CL:0000055!2.24e-10!180;CL:0000057!4.97e-08!75;CL:0000499!5.51e-08!27;CL:0000153!2.46e-07!9;CL:0000447!2.46e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000138;7.38e-14;6!CL:0000153;1.40e-12;9!CL:0000447;1.40e-12;9!CL:0002620;1.46e-11;23!CL:0000135;1.17e-10;3!CL:0000388;1.17e-10;3!CL:0002582;2.12e-09;3!CL:0002334;1.45e-08;12!CL:0000048;1.85e-08;58!CL:0000499;8.29e-08;28!CL:0002583;1.45e-07;2!CL:0000134;2.35e-07;55!CL:0000327;3.09e-07;15!CL:0000723;5.04e-07;61 | ||
|ontology_enrichment_disease=DOID:17;1.84e-10;5!DOID:450;1.84e-10;5!DOID:66;1.84e-10;5!DOID:423;1.84e-10;5!DOID:0080000;1.84e-10;5!DOID:11722;1.84e-10;5!DOID:2394;1.38e-07;14 | |ontology_enrichment_celltype_v019_2=CL:0000058,5.83e-14,6;CL:0000138,5.83e-14,6;CL:0000153,1.27e-12,9;CL:0000447,1.27e-12,9;CL:0002620,1.64e-11,23;CL:0000057,3.81e-11,76;CL:0000135,1.11e-10,3;CL:0000388,1.11e-10,3;CL:0002582,3.74e-09,3;CL:0002334,1.34e-08,12;CL:0000499,7.82e-08,28;CL:0002583,1.02e-07,2;CL:0000327,2.92e-07,15;CL:0000048,6.51e-07,427;CL:0000134,7.32e-07,354 | ||
|ontology_enrichment_uberon=UBERON:0007846;1.17e-10;3!UBERON:0000043;1.17e-10;3!UBERON:0007845;1.17e-10;3!UBERON:0002199;1.48e-07;46!UBERON:0002416;1.48e-07;46 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!6.03e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:17;1.84e-10;5!DOID:450;1.84e-10;5!DOID:66;1.84e-10;5!DOID:423;1.84e-10;5!DOID:0080000;1.84e-10;5!DOID:11722;1.84e-10;5!DOID:2394;1.38e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.56e-10,5;DOID:450,1.56e-10,5;DOID:66,1.56e-10,5;DOID:423,1.56e-10,5;DOID:0080000,1.56e-10,5;DOID:11722,1.56e-10,5;DOID:2394,1.05e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!5.15e-11!95;UBERON:0002199!1.60e-10!45;UBERON:0002416!1.60e-10!45;UBERON:0002097!2.05e-10!40;UBERON:0005156!4.18e-07!59;UBERON:0000990!4.18e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.17e-10;3!UBERON:0000043;1.17e-10;3!UBERON:0007845;1.17e-10;3!UBERON:0002199;1.48e-07;46!UBERON:0002416;1.48e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.11e-10,3;UBERON:0000043,1.11e-10,3;UBERON:0007845,1.11e-10,3;UBERON:0002199,5.95e-10,46;UBERON:0002416,5.95e-10,46;UBERON:0002097,3.62e-08,41 | |||
|phase1_expression=0.726713517082227,7.70761886007539,0.140954404095971,4.00293193412522,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0.61560529038394,0.204000691244253,0.626909442956176,1.43117993565528,0.684372125364421,0.753255837568817,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3372698286148,3.50936537445123,3.18662341713812,1.5905718941022,10.705967146658,1.41802225746102,1.10864698731282,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74000264525148,0,0,0,0,0,0.234321431833797,1.5608003841516,0,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0.204154171254893,0.122834317311768,0,1.18800285728205,0,0,0,0,0,0.277064115484183,0,0,0,0,1.61450672119976,2.34913127700424,2.54318281391474,2.10063767259082,0.206105058476878,1.28820270022815,0.558350568994769,1.0126579934476,1.26668106709558,2.52433774244115,0.920498986422993,0,5.32514388774922,0.705264687593482,0.67824236924195,0.193260853163297,0.818238361772504,0.286804595389004,0,0,0.348581828608555,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,1.06375246633948,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,1.20575750823834,0.871533458600294,1.19967589418468,0,0,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0,0,0,0,0,0,2.54094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0,0,0,1.24900292158013,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0.664225598535437,1.10621501125022,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0,0.306923946576125,1.68396056659844,0,0,0.160853921143607,0,2.7757744884478,2.84098760501003,1.06765302817952,1.03850885836724,1.62694529843943,0,3.20810352485256,0.276242966807689,0.34444334449382,0,0.393373244878272,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.640986253728404,0.082509499920588,0,1.30012049207304,0,1.35339005608971,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.255679882248303,1.69160867728801,1.32227932288782,0.576570202095319,0.382838137483752,0.4046311234222,0,0.31481234683064,0,0,0,1.73986598415015,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0.421258456238981,0,0.974853958525138,0,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0.876901770507525,0,0,0.405820753925408,1.239293992399,0.563391205064483,0,0,0,0,1.26664581178598,0.658589785919804,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0.988823245360557,0,0,0.552567831062295,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.947798694427319,0,0,0,0,0,0,0,0.554698692052555,0,0,0.0870592065804026,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0.19871461170299,0,0,0.160317640503067,0,1.19885765749278,0,0,0,0.864328787928898,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0.542999601753713,0.864221491201268,1.95952416065645,0,0,0.340776043570843,0.113312091520126,0,0,0.517131825446202,0,0,0,0,0.157204305099666,0,0.992332043623902,0,0,0.638341257770182,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,1.64180283175561,2.10341978862502,0.554805861502613,2.08343305802598,6.54076544556695,0,0.228840068396924,0,0.310874401165561,1.03498604992744,0.63718706865481,1.34940933649081,1.70789252563885,0,0.265841714557995,2.60872530905867,0.901545653983311,0.380805212168795,2.84809513243263,2.00033525122815,0.751873899297419,0.464033759878494,3.58286299828754,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0,0.552317850755522,0,0,0.255788742607303,0,1.41539347670307,0,0,1.91317428091515,0.123935764259002,0,0.318004350653419,0,0,1.76337971845342,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0.655087670040387,0,0,0,0,0,0,0,0.992422356778588,2.11045493231545,0,0,0,0,0,0,0,0.514464028312255,0,0,0.354581522651905,0,0.078493092850514,0,0,0.913158720509496,0.215927591218621,0,0,0,0,0,0,0,0.17071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| ||
|short_description=p@chr9:117840275..117840294,- | |short_description=p@chr9:117840275..117840294,- | ||
}} | }} |
Latest revision as of 22:08, 31 July 2015
Short description: | p@chr9:117840275..117840294, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:117840275..117840294, - |
Coexpression cluster: | C864_Chondrocyte_peripheral_Fibroblast_Adipocyte_mesenchymal_Neural_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 5.83e-14 | 6 |
chondrocyte | 5.83e-14 | 6 |
GAG secreting cell | 1.27e-12 | 9 |
carbohydrate secreting cell | 1.27e-12 | 9 |
skin fibroblast | 1.64e-11 | 23 |
fibroblast | 3.81e-11 | 76 |
fibrocyte | 1.11e-10 | 3 |
tendon cell | 1.11e-10 | 3 |
visceral preadipocyte | 3.74e-09 | 3 |
preadipocyte | 1.34e-08 | 12 |
stromal cell | 7.82e-08 | 28 |
subcutaneous preadipocyte | 1.02e-07 | 2 |
extracellular matrix secreting cell | 2.92e-07 | 15 |
multi fate stem cell | 6.51e-07 | 427 |
mesenchymal cell | 7.32e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.11e-10 | 3 |
tendon | 1.11e-10 | 3 |
regular connective tissue | 1.11e-10 | 3 |
integument | 5.95e-10 | 46 |
integumental system | 5.95e-10 | 46 |
skin of body | 3.62e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.56e-10 | 5 |
myotonic disease | 1.56e-10 | 5 |
muscle tissue disease | 1.56e-10 | 5 |
myopathy | 1.56e-10 | 5 |
muscular disease | 1.56e-10 | 5 |
myotonic dystrophy | 1.56e-10 | 5 |
ovarian cancer | 1.05e-07 | 14 |