FFCP PHASE1:Hg19::chr9:117783514..117783525,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:117783514..117783525,- | |||
|coexpression_cluster_id=C864 | |coexpression_cluster_id=C864 | ||
|description=CAGE_peak_at_chr9:117783514..117783525,- | |description=CAGE_peak_at_chr9:117783514..117783525,- | ||
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|ontology_enrichment_celltype=CL:0000055!1.57e-09!180;CL:0002620!2.05e-09!23;CL:0000057!3.56e-09!75;CL:0000499!4.92e-07!27;CL:0000153!5.70e-07!9;CL:0000447!5.70e-07!9 | |ontology_enrichment_celltype=CL:0000055!1.57e-09!180;CL:0002620!2.05e-09!23;CL:0000057!3.56e-09!75;CL:0000499!4.92e-07!27;CL:0000153!5.70e-07!9;CL:0000447!5.70e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000135;2.55e-17;3!CL:0000388;2.55e-17;3!CL:0000138;3.96e-15;6!CL:0002583;1.19e-11;2!CL:0000153;4.00e-10;9!CL:0000447;4.00e-10;9!CL:0000048;1.33e-09;58!CL:0000723;1.41e-09;61!CL:0000499;7.25e-09;28!CL:0002540;8.67e-09;6!CL:0000134;1.54e-08;55!CL:0000034;3.72e-08;69!CL:0002620;3.85e-08;23!CL:0000064;4.71e-08;3!CL:0000067;4.71e-08;3!CL:0005012;4.71e-08;3!CL:0002304;4.71e-08;3 | |ontology_enrichment_celltype_v019=CL:0000135;2.55e-17;3!CL:0000388;2.55e-17;3!CL:0000138;3.96e-15;6!CL:0002583;1.19e-11;2!CL:0000153;4.00e-10;9!CL:0000447;4.00e-10;9!CL:0000048;1.33e-09;58!CL:0000723;1.41e-09;61!CL:0000499;7.25e-09;28!CL:0002540;8.67e-09;6!CL:0000134;1.54e-08;55!CL:0000034;3.72e-08;69!CL:0002620;3.85e-08;23!CL:0000064;4.71e-08;3!CL:0000067;4.71e-08;3!CL:0005012;4.71e-08;3!CL:0002304;4.71e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.50e-17,3;CL:0000388,2.50e-17,3;CL:0000058,4.85e-15,6;CL:0000138,4.85e-15,6;CL:0002583,2.67e-11,2;CL:0000153,4.57e-10,9;CL:0000447,4.57e-10,9;CL:0002540,5.58e-09,6;CL:0000499,7.75e-09,28;CL:0002620,3.76e-08,23;CL:0000064,6.50e-08,3;CL:0000067,6.50e-08,3;CL:0005012,6.50e-08,3;CL:0002304,6.50e-08,3;CL:0000134,8.12e-08,354;CL:0002320,1.51e-07,361;CL:0000219,2.51e-07,386;CL:0002570,9.65e-07,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!3.80e-07!5;DOID:450!3.80e-07!5;DOID:66!3.80e-07!5;DOID:423!3.80e-07!5;DOID:0080000!3.80e-07!5;DOID:11722!3.80e-07!5 | |ontology_enrichment_disease=DOID:17!3.80e-07!5;DOID:450!3.80e-07!5;DOID:66!3.80e-07!5;DOID:423!3.80e-07!5;DOID:0080000!3.80e-07!5;DOID:11722!3.80e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;3.56e-10;5!DOID:450;3.56e-10;5!DOID:66;3.56e-10;5!DOID:423;3.56e-10;5!DOID:0080000;3.56e-10;5!DOID:11722;3.56e-10;5 | |ontology_enrichment_disease_v019=DOID:17;3.56e-10;5!DOID:450;3.56e-10;5!DOID:66;3.56e-10;5!DOID:423;3.56e-10;5!DOID:0080000;3.56e-10;5!DOID:11722;3.56e-10;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,2.99e-10,5;DOID:450,2.99e-10,5;DOID:66,2.99e-10,5;DOID:423,2.99e-10,5;DOID:0080000,2.99e-10,5;DOID:11722,2.99e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!8.12e-09!95;UBERON:0002199!7.24e-08!45;UBERON:0002416!7.24e-08!45;UBERON:0002097!1.86e-07!40 | |ontology_enrichment_uberon=UBERON:0003102!8.12e-09!95;UBERON:0002199!7.24e-08!45;UBERON:0002416!7.24e-08!45;UBERON:0002097!1.86e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.55e-17;3!UBERON:0000043;2.55e-17;3!UBERON:0007845;2.55e-17;3!UBERON:0002118;2.20e-10;5!UBERON:0001778;4.71e-08;3!UBERON:0001775;4.71e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0007846;2.55e-17;3!UBERON:0000043;2.55e-17;3!UBERON:0007845;2.55e-17;3!UBERON:0002118;2.20e-10;5!UBERON:0001778;4.71e-08;3!UBERON:0001775;4.71e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.50e-17,3;UBERON:0000043,2.50e-17,3;UBERON:0007845,2.50e-17,3;UBERON:0002118,2.47e-10,5;UBERON:0002199,4.63e-08,46;UBERON:0002416,4.63e-08,46;UBERON:0001778,6.50e-08,3;UBERON:0001775,6.50e-08,3;UBERON:0002384,3.53e-07,371 | |||
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| ||
|short_description=p@chr9:117783514..117783525,- | |short_description=p@chr9:117783514..117783525,- | ||
}} | }} |
Latest revision as of 22:08, 31 July 2015
Short description: | p@chr9:117783514..117783525, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:117783514..117783525, - |
Coexpression cluster: | C864_Chondrocyte_peripheral_Fibroblast_Adipocyte_mesenchymal_Neural_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.50e-17 | 3 |
tendon cell | 2.50e-17 | 3 |
chondroblast | 4.85e-15 | 6 |
chondrocyte | 4.85e-15 | 6 |
subcutaneous preadipocyte | 2.67e-11 | 2 |
GAG secreting cell | 4.57e-10 | 9 |
carbohydrate secreting cell | 4.57e-10 | 9 |
mesenchymal stem cell of the bone marrow | 5.58e-09 | 6 |
stromal cell | 7.75e-09 | 28 |
skin fibroblast | 3.76e-08 | 23 |
ciliated cell | 6.50e-08 | 3 |
ciliated epithelial cell | 6.50e-08 | 3 |
multi-ciliated epithelial cell | 6.50e-08 | 3 |
non-pigmented ciliary epithelial cell | 6.50e-08 | 3 |
mesenchymal cell | 8.12e-08 | 354 |
connective tissue cell | 1.51e-07 | 361 |
motile cell | 2.51e-07 | 386 |
mesenchymal stem cell of adipose | 9.65e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.50e-17 | 3 |
tendon | 2.50e-17 | 3 |
regular connective tissue | 2.50e-17 | 3 |
right ovary | 2.47e-10 | 5 |
integument | 4.63e-08 | 46 |
integumental system | 4.63e-08 | 46 |
ciliary epithelium | 6.50e-08 | 3 |
ciliary body | 6.50e-08 | 3 |
connective tissue | 3.53e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.99e-10 | 5 |
myotonic disease | 2.99e-10 | 5 |
muscle tissue disease | 2.99e-10 | 5 |
myopathy | 2.99e-10 | 5 |
muscular disease | 2.99e-10 | 5 |
myotonic dystrophy | 2.99e-10 | 5 |