FFCP PHASE1:Hg19::chr9:117783514..117783525,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:117783514..117783525,- | |||
|coexpression_cluster_id=C864 | |||
|description=CAGE_peak_at_chr9:117783514..117783525,- | |description=CAGE_peak_at_chr9:117783514..117783525,- | ||
|id=chr9:117783514..117783525,- | |id=chr9:117783514..117783525,- | ||
|ontology_enrichment_celltype=CL:0000055!1.57e-09!180;CL:0002620!2.05e-09!23;CL:0000057!3.56e-09!75;CL:0000499!4.92e-07!27;CL:0000153!5.70e-07!9;CL:0000447!5.70e-07!9 | |ontology_enrichment_celltype=CL:0000055!1.57e-09!180;CL:0002620!2.05e-09!23;CL:0000057!3.56e-09!75;CL:0000499!4.92e-07!27;CL:0000153!5.70e-07!9;CL:0000447!5.70e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000135;2.55e-17;3!CL:0000388;2.55e-17;3!CL:0000138;3.96e-15;6!CL:0002583;1.19e-11;2!CL:0000153;4.00e-10;9!CL:0000447;4.00e-10;9!CL:0000048;1.33e-09;58!CL:0000723;1.41e-09;61!CL:0000499;7.25e-09;28!CL:0002540;8.67e-09;6!CL:0000134;1.54e-08;55!CL:0000034;3.72e-08;69!CL:0002620;3.85e-08;23!CL:0000064;4.71e-08;3!CL:0000067;4.71e-08;3!CL:0005012;4.71e-08;3!CL:0002304;4.71e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.50e-17,3;CL:0000388,2.50e-17,3;CL:0000058,4.85e-15,6;CL:0000138,4.85e-15,6;CL:0002583,2.67e-11,2;CL:0000153,4.57e-10,9;CL:0000447,4.57e-10,9;CL:0002540,5.58e-09,6;CL:0000499,7.75e-09,28;CL:0002620,3.76e-08,23;CL:0000064,6.50e-08,3;CL:0000067,6.50e-08,3;CL:0005012,6.50e-08,3;CL:0002304,6.50e-08,3;CL:0000134,8.12e-08,354;CL:0002320,1.51e-07,361;CL:0000219,2.51e-07,386;CL:0002570,9.65e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.80e-07!5;DOID:450!3.80e-07!5;DOID:66!3.80e-07!5;DOID:423!3.80e-07!5;DOID:0080000!3.80e-07!5;DOID:11722!3.80e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;3.56e-10;5!DOID:450;3.56e-10;5!DOID:66;3.56e-10;5!DOID:423;3.56e-10;5!DOID:0080000;3.56e-10;5!DOID:11722;3.56e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.99e-10,5;DOID:450,2.99e-10,5;DOID:66,2.99e-10,5;DOID:423,2.99e-10,5;DOID:0080000,2.99e-10,5;DOID:11722,2.99e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!8.12e-09!95;UBERON:0002199!7.24e-08!45;UBERON:0002416!7.24e-08!45;UBERON:0002097!1.86e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.55e-17;3!UBERON:0000043;2.55e-17;3!UBERON:0007845;2.55e-17;3!UBERON:0002118;2.20e-10;5!UBERON:0001778;4.71e-08;3!UBERON:0001775;4.71e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.50e-17,3;UBERON:0000043,2.50e-17,3;UBERON:0007845,2.50e-17,3;UBERON:0002118,2.47e-10,5;UBERON:0002199,4.63e-08,46;UBERON:0002416,4.63e-08,46;UBERON:0001778,6.50e-08,3;UBERON:0001775,6.50e-08,3;UBERON:0002384,3.53e-07,371 | |||
|phase1_expression=0.54503513781167,3.42560838225573,0,4.00293193412522,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.861847406537515,0,0.313454721478088,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,1.15877215168659,3.9764297352555,5.35298357332899,1.22895262313288,1.33037638477538,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.494533858557114,0,0,0.336672227908132,0,0,0,0,0.150238058906597,0,1.79389635688862,1.2813443329114,0.847727604638247,1.50045548042201,0.412210116953756,0,0.37223371266318,3.03797398034279,0.974370051611986,2.01947019395292,0.828449087780694,0,4.9701342952326,0.705264687593482,0.169560592310488,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.699810938274399,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,2.28685161800217,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.892144943985809,0,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0.561320188866147,0,0.511707249066704,0.321707842287215,0,1.23367755042124,1.06537035187876,0.574890092096664,0,0.697262270759755,0,1.80455823272956,0.276242966807689,0.459257792658427,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0.165018999841176,0,0.650060246036521,0,0.290012154876366,0.154048617114644,0,0,0,0,0,0.445160178233687,0,0.576570202095319,0.255225424989168,0.30347334256665,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0,0,0,0,0.844430541190656,0.658589785919804,0,0,0.288666338176536,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0.890894042497916,0,0,0,0.445234820091624,0.659215496907038,0,0,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0.39961921916426,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0.864221491201268,0.979762080328227,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,1.64180283175561,2.10341978862502,0,1.7046270474758,3.52195062453605,1.77962244319307,0,0,0,1.62640664988597,0.63718706865481,0,0.776314784381297,0,0,1.5652351854352,0.450772826991655,0.380805212168795,1.62748293281865,2.18218391043071,0.429642228169954,0,1.19428766609585,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.736423801007363,0.139879507719444,0,0,0,1.41539347670307,0,0,1.91317428091515,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0.183428598521679,0.577628330751691,0.381382095467167,0,0.198916222116275,0,0,0,0,0.49131575253029,0,0,0,0,0,0.546974809018219,0,0,1.05522746615772,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0.222462803784138,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0.423387050190929,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0.8453114551668,0,0.0939839179798536,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,2.60396512716726,2.77305377178851,1.29787968637137,0,0,0.253397002022874,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 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|phase1_expression=0.54503513781167,3.42560838225573,0,4.00293193412522,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.861847406537515,0,0.313454721478088,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,1.15877215168659,3.9764297352555,5.35298357332899,1.22895262313288,1.33037638477538,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.494533858557114,0,0,0.336672227908132,0,0,0,0,0.150238058906597,0,1.79389635688862,1.2813443329114,0.847727604638247,1.50045548042201,0.412210116953756,0,0.37223371266318,3.03797398034279,0.974370051611986,2.01947019395292,0.828449087780694,0,4.9701342952326,0.705264687593482,0.169560592310488,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.699810938274399,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,2.28685161800217,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.892144943985809,0,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0.561320188866147,0,0.511707249066704,0.321707842287215,0,1.23367755042124,1.06537035187876,0.574890092096664,0,0.697262270759755,0,1.80455823272956,0.276242966807689,0.459257792658427,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0.165018999841176,0,0.650060246036521,0,0.290012154876366,0.154048617114644,0,0,0,0,0,0.445160178233687,0,0.576570202095319,0.255225424989168,0.30347334256665,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0,0,0,0,0.844430541190656,0.658589785919804,0,0,0.288666338176536,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0.890894042497916,0,0,0,0.445234820091624,0.659215496907038,0,0,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0.39961921916426,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0.864221491201268,0.979762080328227,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,1.64180283175561,2.10341978862502,0,1.7046270474758,3.52195062453605,1.77962244319307,0,0,0,1.62640664988597,0.63718706865481,0,0.776314784381297,0,0,1.5652351854352,0.450772826991655,0.380805212168795,1.62748293281865,2.18218391043071,0.429642228169954,0,1.19428766609585,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.736423801007363,0.139879507719444,0,0,0,1.41539347670307,0,0,1.91317428091515,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0.183428598521679,0.577628330751691,0.381382095467167,0,0.198916222116275,0,0,0,0,0.49131575253029,0,0,0,0,0,0.546974809018219,0,0,1.05522746615772,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0.222462803784138,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0.423387050190929,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0.8453114551668,0,0.0939839179798536,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,2.60396512716726,2.77305377178851,1.29787968637137,0,0,0.253397002022874,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr9:117783514..117783525,- | |short_description=p@chr9:117783514..117783525,- | ||
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Latest revision as of 22:08, 31 July 2015
Short description: | p@chr9:117783514..117783525, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:117783514..117783525, - |
Coexpression cluster: | C864_Chondrocyte_peripheral_Fibroblast_Adipocyte_mesenchymal_Neural_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.50e-17 | 3 |
tendon cell | 2.50e-17 | 3 |
chondroblast | 4.85e-15 | 6 |
chondrocyte | 4.85e-15 | 6 |
subcutaneous preadipocyte | 2.67e-11 | 2 |
GAG secreting cell | 4.57e-10 | 9 |
carbohydrate secreting cell | 4.57e-10 | 9 |
mesenchymal stem cell of the bone marrow | 5.58e-09 | 6 |
stromal cell | 7.75e-09 | 28 |
skin fibroblast | 3.76e-08 | 23 |
ciliated cell | 6.50e-08 | 3 |
ciliated epithelial cell | 6.50e-08 | 3 |
multi-ciliated epithelial cell | 6.50e-08 | 3 |
non-pigmented ciliary epithelial cell | 6.50e-08 | 3 |
mesenchymal cell | 8.12e-08 | 354 |
connective tissue cell | 1.51e-07 | 361 |
motile cell | 2.51e-07 | 386 |
mesenchymal stem cell of adipose | 9.65e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.50e-17 | 3 |
tendon | 2.50e-17 | 3 |
regular connective tissue | 2.50e-17 | 3 |
right ovary | 2.47e-10 | 5 |
integument | 4.63e-08 | 46 |
integumental system | 4.63e-08 | 46 |
ciliary epithelium | 6.50e-08 | 3 |
ciliary body | 6.50e-08 | 3 |
connective tissue | 3.53e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.99e-10 | 5 |
myotonic disease | 2.99e-10 | 5 |
muscle tissue disease | 2.99e-10 | 5 |
myopathy | 2.99e-10 | 5 |
muscular disease | 2.99e-10 | 5 |
myotonic dystrophy | 2.99e-10 | 5 |