FFCP PHASE1:Hg19::chr9:114490565..114490579,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:114490565..114490579,- | |||
|coexpression_cluster_id=C1938 | |coexpression_cluster_id=C1938 | ||
|description=CAGE_peak_at_chr9:114490565..114490579,- | |description=CAGE_peak_at_chr9:114490565..114490579,- | ||
|id=chr9:114490565..114490579,- | |id=chr9:114490565..114490579,- | ||
|ontology_enrichment_celltype=CL:0000066!1.17e-15!254;CL:0002150!5.35e-09!3;CL:0000861!5.35e-09!3;CL:0000076!1.46e-08!62;CL:0000082!3.96e-08!19;CL:0000319!1.15e-07!1;CL:0000083!2.18e-07!4 | |ontology_enrichment_celltype=CL:0000066!1.17e-15!254;CL:0002150!5.35e-09!3;CL:0000861!5.35e-09!3;CL:0000076!1.46e-08!62;CL:0000082!3.96e-08!19;CL:0000319!1.15e-07!1;CL:0000083!2.18e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002535;9.40e-14;2!CL:0000322;1.67e-09;3!CL:0000083;1.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,9.40e-14,2;CL:0000322,1.81e-09,3;CL:0000083,1.69e-07,4;CL:0000076,9.84e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.14e-09;3!UBERON:0003353;1.14e-09;3 | |||
|ontology_enrichment_disease=DOID:305!3.53e-35!106;DOID:0050687!8.50e-25!143;DOID:1749!1.26e-21!14;DOID:162!3.05e-17!235;DOID:14566!8.98e-17!239;DOID:4074!6.28e-14!2;DOID:4905!6.28e-14!2;DOID:3498!6.28e-14!2;DOID:3908!3.86e-12!5;DOID:1324!2.33e-10!15;DOID:170!2.89e-10!6;DOID:0050615!1.07e-09!16;DOID:4556!1.97e-09!3;DOID:3030!1.15e-07!1;DOID:1793!2.18e-07!4;DOID:3905!6.06e-07!9 | |ontology_enrichment_disease=DOID:305!3.53e-35!106;DOID:0050687!8.50e-25!143;DOID:1749!1.26e-21!14;DOID:162!3.05e-17!235;DOID:14566!8.98e-17!239;DOID:4074!6.28e-14!2;DOID:4905!6.28e-14!2;DOID:3498!6.28e-14!2;DOID:3908!3.86e-12!5;DOID:1324!2.33e-10!15;DOID:170!2.89e-10!6;DOID:0050615!1.07e-09!16;DOID:4556!1.97e-09!3;DOID:3030!1.15e-07!1;DOID:1793!2.18e-07!4;DOID:3905!6.06e-07!9 | ||
|ontology_enrichment_disease_v019=DOID:1749;9.36e-29;14!DOID:3908;9.44e-21;5!DOID:4074;1.07e-13;2!DOID:4905;1.07e-13;2!DOID:3498;1.07e-13;2!DOID:3910;1.37e-13;2!DOID:3905;5.37e-12;9!DOID:4556;1.14e-09;3!DOID:1324;1.42e-07;15!DOID:1793;1.69e-07;4!DOID:0050615;3.72e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.70e-29,14;DOID:3908,1.10e-20,5;DOID:4074,1.07e-13,2;DOID:4905,1.07e-13,2;DOID:3498,1.07e-13,2;DOID:3910,1.55e-13,2;DOID:3905,5.83e-12,9;DOID:305,1.74e-11,106;DOID:4556,1.19e-09,3;DOID:0050687,1.68e-08,143;DOID:1324,1.49e-07,15;DOID:1793,1.69e-07,4;DOID:0050615,3.90e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0000065!3.56e-12!53;UBERON:0001004!4.14e-10!72;UBERON:0000072!1.83e-09!46;UBERON:0008947!2.75e-09!38;UBERON:0003258!2.75e-09!38;UBERON:0002294!1.24e-08!7;UBERON:0001173!1.24e-08!7;UBERON:0004912!1.24e-08!7;UBERON:0004119!3.10e-08!169;UBERON:0000925!3.10e-08!169;UBERON:0006595!3.10e-08!169;UBERON:0001041!3.40e-08!98;UBERON:0004802!3.96e-08!19;UBERON:0000115!3.96e-08!19;UBERON:0000077!8.08e-08!130;UBERON:0001282!8.84e-08!1;UBERON:0009842!8.84e-08!1;UBERON:0003704!8.84e-08!1;UBERON:0001171!8.84e-08!1;UBERON:0001172!8.84e-08!1;UBERON:0002394!4.20e-07!4;UBERON:0003928!4.20e-07!4;UBERON:0003343!4.91e-07!4;UBERON:0004785!4.91e-07!4;UBERON:0001007!5.21e-07!155;UBERON:0001555!5.21e-07!155;UBERON:0007026!5.21e-07!155;UBERON:0002048!5.49e-07!22;UBERON:0000117!5.49e-07!22;UBERON:0000171!5.49e-07!22;UBERON:0000170!5.49e-07!22;UBERON:0005597!5.49e-07!22;UBERON:0000118!5.49e-07!22 | |ontology_enrichment_uberon=UBERON:0000065!3.56e-12!53;UBERON:0001004!4.14e-10!72;UBERON:0000072!1.83e-09!46;UBERON:0008947!2.75e-09!38;UBERON:0003258!2.75e-09!38;UBERON:0002294!1.24e-08!7;UBERON:0001173!1.24e-08!7;UBERON:0004912!1.24e-08!7;UBERON:0004119!3.10e-08!169;UBERON:0000925!3.10e-08!169;UBERON:0006595!3.10e-08!169;UBERON:0001041!3.40e-08!98;UBERON:0004802!3.96e-08!19;UBERON:0000115!3.96e-08!19;UBERON:0000077!8.08e-08!130;UBERON:0001282!8.84e-08!1;UBERON:0009842!8.84e-08!1;UBERON:0003704!8.84e-08!1;UBERON:0001171!8.84e-08!1;UBERON:0001172!8.84e-08!1;UBERON:0002394!4.20e-07!4;UBERON:0003928!4.20e-07!4;UBERON:0003343!4.91e-07!4;UBERON:0004785!4.91e-07!4;UBERON:0001007!5.21e-07!155;UBERON:0001555!5.21e-07!155;UBERON:0007026!5.21e-07!155;UBERON:0002048!5.49e-07!22;UBERON:0000117!5.49e-07!22;UBERON:0000171!5.49e-07!22;UBERON:0000170!5.49e-07!22;UBERON:0005597!5.49e-07!22;UBERON:0000118!5.49e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;9.40e-14;2!UBERON:0004801;9.40e-14;2!UBERON:0004903;1.37e-13;2!UBERON:0002173;1.37e-13;2!UBERON:0002186;1.37e-13;2!UBERON:0004821;1.67e-09;3!UBERON:0007499;1.67e-09;3!UBERON:0003215;1.67e-09;3!UBERON:0010368;1.67e-09;3!UBERON:0009911;1.67e-09;3!UBERON:0002299;1.67e-09;3!UBERON:0006524;1.67e-09;3!UBERON:0008874;1.67e-09;3!UBERON:0002169;1.67e-09;3!UBERON:0004894;1.67e-09;3!UBERON:0009856;1.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,9.40e-14,2;UBERON:0004801,9.40e-14,2;UBERON:0004903,1.55e-13,2;UBERON:0002173,1.55e-13,2;UBERON:0002186,1.55e-13,2;UBERON:0004821,1.81e-09,3;UBERON:0003215,1.81e-09,3;UBERON:0010368,1.81e-09,3;UBERON:0009911,1.81e-09,3;UBERON:0002299,1.81e-09,3;UBERON:0006524,1.81e-09,3;UBERON:0008874,1.81e-09,3;UBERON:0002169,1.81e-09,3;UBERON:0004894,1.81e-09,3 | |||
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|short_description=p@chr9:114490565..114490579,- | |short_description=p@chr9:114490565..114490579,- | ||
}} | }} |
Latest revision as of 21:48, 31 July 2015
Short description: | p@chr9:114490565..114490579, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:114490565..114490579, - |
Coexpression cluster: | C1938_malignant_epidermoid_prostate_oral_large_anaplastic_ductal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 9.40e-14 | 2 |
pneumocyte | 1.81e-09 | 3 |
epithelial cell of pancreas | 1.69e-07 | 4 |
squamous epithelial cell | 9.84e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 9.40e-14 | 2 |
cervix epithelium | 9.40e-14 | 2 |
bronchoalveolar duct junction | 1.55e-13 | 2 |
alveolar duct | 1.55e-13 | 2 |
bronchiole | 1.55e-13 | 2 |
pulmonary alveolus epithelium | 1.81e-09 | 3 |
alveolus | 1.81e-09 | 3 |
pulmonary lobule | 1.81e-09 | 3 |
lobule | 1.81e-09 | 3 |
alveolus of lung | 1.81e-09 | 3 |
alveolar system | 1.81e-09 | 3 |
pulmonary acinus | 1.81e-09 | 3 |
alveolar sac | 1.81e-09 | 3 |
alveolar wall | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.70e-29 | 14 |
non-small cell lung carcinoma | 1.10e-20 | 5 |
pancreas adenocarcinoma | 1.07e-13 | 2 |
pancreatic carcinoma | 1.07e-13 | 2 |
pancreatic ductal adenocarcinoma | 1.07e-13 | 2 |
lung adenocarcinoma | 1.55e-13 | 2 |
lung carcinoma | 5.83e-12 | 9 |
carcinoma | 1.74e-11 | 106 |
lung large cell carcinoma | 1.19e-09 | 3 |
cell type cancer | 1.68e-08 | 143 |
lung cancer | 1.49e-07 | 15 |
pancreatic cancer | 1.69e-07 | 4 |
respiratory system cancer | 3.90e-07 | 16 |