FFCP PHASE1:Hg19::chr9:112300690..112300705,-: Difference between revisions
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|id=chr9:112300690..112300705,-
|short_description=p@chr9:112300690..112300705,-
|description=CAGE_peak_at_chr9:112300690..112300705,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:112300690..112300705,- | |||
|coexpression_cluster_id=C4030 | |||
|description=CAGE_peak_at_chr9:112300690..112300705,- | |||
|id=chr9:112300690..112300705,- | |||
|ontology_enrichment_celltype=CL:0000312!5.38e-09!5;CL:0000349!1.18e-07!3;CL:0002577!1.18e-07!3;CL:0000240!1.45e-07!6;CL:0000311!1.45e-07!6;CL:0000079!1.45e-07!6;CL:0000237!1.45e-07!6;CL:0000036!1.45e-07!6;CL:0000357!1.45e-07!6;CL:0000114!1.45e-07!6;CL:0002076!3.42e-07!43;CL:0002231!4.26e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002577;9.22e-39;3!CL:0000083;2.03e-08;4!CL:0000349;5.58e-07;19!CL:0000312;6.58e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.01e-38,3;CL:0000083,1.96e-08,4;CL:0000349,5.66e-07,19;CL:0000312,6.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.99e-30;1 | |||
|ontology_enrichment_disease=DOID:1749!6.46e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:4074;1.66e-15;2!DOID:4905;1.66e-15;2!DOID:3498;1.66e-15;2!DOID:1793;2.03e-08;4!DOID:4362;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.54e-15,2;DOID:4905,1.54e-15,2;DOID:3498,1.54e-15,2;DOID:1793,1.96e-08,4;DOID:4362,6.04e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0005795!1.14e-12!22;UBERON:0001987!6.05e-12!4;UBERON:0004340!6.05e-12!4;UBERON:0000161!2.90e-11!35;UBERON:0006562!2.34e-10!11;UBERON:0000995!3.26e-10!21;UBERON:0003127!6.11e-10!2;UBERON:0000166!6.13e-10!21;UBERON:0003975!1.05e-09!22;UBERON:0004119!4.00e-09!169;UBERON:0000925!4.00e-09!169;UBERON:0006595!4.00e-09!169;UBERON:0004175!2.01e-08!25;UBERON:0003100!9.77e-08!41;UBERON:0003102!1.23e-07!95;UBERON:0000002!1.42e-07!6;UBERON:0001560!1.42e-07!6;UBERON:0001042!1.62e-07!10;UBERON:0009145!1.62e-07!10;UBERON:0005156!2.28e-07!59;UBERON:0000990!2.28e-07!59;UBERON:0000165!3.22e-07!28;UBERON:0000930!3.22e-07!28;UBERON:0001723!3.33e-07!3;UBERON:0001033!3.33e-07!3;UBERON:0010056!3.33e-07!3;UBERON:0003124!5.48e-07!7;UBERON:0003134!6.60e-07!37;UBERON:0000474!6.60e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.90e-64;4!UBERON:0007029;3.64e-29;1!UBERON:0000474;5.28e-12;37!UBERON:0000478;2.00e-11;24!UBERON:0003100;6.52e-11;41!UBERON:0000077;3.11e-10;27!UBERON:0001003;1.85e-08;15!UBERON:0007376;1.85e-08;15!UBERON:0000014;2.52e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.24e-64,4;UBERON:0004340,3.24e-64,4;UBERON:0003124,3.85e-37,7;UBERON:0007029,3.16e-29,1;UBERON:0000995,4.18e-22,21;UBERON:0005795,3.95e-21,22;UBERON:0003975,3.95e-21,22;UBERON:0005631,5.07e-19,14;UBERON:0000158,5.07e-19,14;UBERON:0004175,1.14e-18,25;UBERON:0003134,8.49e-13,37;UBERON:0000474,8.49e-13,37;UBERON:0003100,1.34e-11,41;UBERON:0000478,2.04e-11,24;UBERON:0003133,5.61e-10,48;UBERON:0000077,1.44e-09,29;UBERON:0001003,1.85e-08,15;UBERON:0007376,1.85e-08,15;UBERON:0007383,1.85e-08,15;UBERON:0000014,2.43e-08,4;UBERON:0005156,3.36e-08,59;UBERON:0000990,3.36e-08,59 | |||
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|short_description=p@chr9:112300690..112300705,- | |||
}} | }} |
Latest revision as of 21:35, 31 July 2015
Short description: | p@chr9:112300690..112300705, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:112300690..112300705, - |
Coexpression cluster: | C4030_Placental_placenta_chorionic_cervix_Lymphatic_Amniotic_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.01e-38 | 3 |
epithelial cell of pancreas | 1.96e-08 | 4 |
extraembryonic cell | 5.66e-07 | 19 |
keratinocyte | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
placenta | 3.24e-64 | 4 |
allantois | 3.24e-64 | 4 |
chorion | 3.85e-37 | 7 |
surface | 3.16e-29 | 1 |
uterus | 4.18e-22 | 21 |
embryonic uterus | 3.95e-21 | 22 |
internal female genitalia | 3.95e-21 | 22 |
extraembryonic membrane | 5.07e-19 | 14 |
membranous layer | 5.07e-19 | 14 |
internal genitalia | 1.14e-18 | 25 |
female reproductive organ | 8.49e-13 | 37 |
female reproductive system | 8.49e-13 | 37 |
female organism | 1.34e-11 | 41 |
extraembryonic structure | 2.04e-11 | 24 |
reproductive organ | 5.61e-10 | 48 |
mixed endoderm/mesoderm-derived structure | 1.44e-09 | 29 |
skin epidermis | 1.85e-08 | 15 |
outer epithelium | 1.85e-08 | 15 |
enveloping layer of ectoderm | 1.85e-08 | 15 |
zone of skin | 2.43e-08 | 4 |
reproductive structure | 3.36e-08 | 59 |
reproductive system | 3.36e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.54e-15 | 2 |
pancreatic carcinoma | 1.54e-15 | 2 |
pancreatic ductal adenocarcinoma | 1.54e-15 | 2 |
pancreatic cancer | 1.96e-08 | 4 |
cervical cancer | 6.04e-07 | 5 |