FFCP PHASE1:Hg19::chr8:89856204..89856207,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:89856204..89856207,- | |||
|description=CAGE_peak_at_chr8:89856204..89856207,- | |description=CAGE_peak_at_chr8:89856204..89856207,- | ||
|id=chr8:89856204..89856207,- | |id=chr8:89856204..89856207,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.87e-11;2!CL:1000415;2.87e-11;2!CL:0000322;6.13e-08;3 | |ontology_enrichment_celltype_v019=CL:0000047;2.87e-11;2!CL:1000415;2.87e-11;2!CL:0000322;6.13e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:1000415,3.35e-11,2;CL:0000322,5.93e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;6.13e-08;3!UBERON:0003057;6.13e-08;3 | |ontology_enrichment_development_v019=UBERON:0006241;6.13e-08;3!UBERON:0003057;6.13e-08;3 | ||
|ontology_enrichment_disease=DOID:305!4.03e-08!106 | |ontology_enrichment_disease=DOID:305!4.03e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:1799;3.81e-21;1!DOID:0050619;3.81e-21;1!DOID:10165;3.81e-21;1!DOID:1357;3.81e-21;1!DOID:1798;3.81e-21;1!DOID:3910;2.87e-11;2 | |ontology_enrichment_disease_v019=DOID:1799;3.81e-21;1!DOID:0050619;3.81e-21;1!DOID:10165;3.81e-21;1!DOID:1357;3.81e-21;1!DOID:1798;3.81e-21;1!DOID:3910;2.87e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,7.72e-21,1;DOID:1357,7.72e-21,1;DOID:1799,9.43e-21,1;DOID:10165,9.43e-21,1;DOID:1798,9.43e-21,1;DOID:3910,2.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001017!9.67e-12!82;UBERON:0005743!1.60e-11!86;UBERON:0001049!3.29e-10!57;UBERON:0005068!3.29e-10!57;UBERON:0006241!3.29e-10!57;UBERON:0007135!3.29e-10!57;UBERON:0000073!1.44e-09!94;UBERON:0001016!1.44e-09!94;UBERON:0002346!1.73e-08!90;UBERON:0003075!2.25e-08!86;UBERON:0007284!2.25e-08!86;UBERON:0001893!3.47e-08!34;UBERON:0002780!3.84e-08!41;UBERON:0001890!3.84e-08!41;UBERON:0006240!3.84e-08!41;UBERON:0003080!7.73e-08!42;UBERON:0002791!2.33e-07!33;UBERON:0007023!3.93e-07!115;UBERON:0002020!4.93e-07!34;UBERON:0003528!4.93e-07!34;UBERON:0000955!6.22e-07!69;UBERON:0006238!6.22e-07!69;UBERON:0002616!7.08e-07!59;UBERON:0000200!9.03e-07!6;UBERON:0001869!9.30e-07!32 | |ontology_enrichment_uberon=UBERON:0001017!9.67e-12!82;UBERON:0005743!1.60e-11!86;UBERON:0001049!3.29e-10!57;UBERON:0005068!3.29e-10!57;UBERON:0006241!3.29e-10!57;UBERON:0007135!3.29e-10!57;UBERON:0000073!1.44e-09!94;UBERON:0001016!1.44e-09!94;UBERON:0002346!1.73e-08!90;UBERON:0003075!2.25e-08!86;UBERON:0007284!2.25e-08!86;UBERON:0001893!3.47e-08!34;UBERON:0002780!3.84e-08!41;UBERON:0001890!3.84e-08!41;UBERON:0006240!3.84e-08!41;UBERON:0003080!7.73e-08!42;UBERON:0002791!2.33e-07!33;UBERON:0007023!3.93e-07!115;UBERON:0002020!4.93e-07!34;UBERON:0003528!4.93e-07!34;UBERON:0000955!6.22e-07!69;UBERON:0006238!6.22e-07!69;UBERON:0002616!7.08e-07!59;UBERON:0000200!9.03e-07!6;UBERON:0001869!9.30e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;3.81e-21;1!UBERON:0001825;3.81e-21;1!UBERON:0004903;2.87e-11;2!UBERON:0002173;2.87e-11;2!UBERON:0002186;2.87e-11;2!UBERON:0002240;6.13e-08;3!UBERON:0002110;6.13e-08;3!UBERON:0004821;6.13e-08;3!UBERON:0007499;6.13e-08;3!UBERON:0005174;6.13e-08;3!UBERON:0003215;6.13e-08;3!UBERON:0010368;6.13e-08;3!UBERON:0009911;6.13e-08;3!UBERON:0002299;6.13e-08;3!UBERON:0006524;6.13e-08;3!UBERON:0008874;6.13e-08;3!UBERON:0001137;6.13e-08;3!UBERON:0002169;6.13e-08;3!UBERON:0004894;6.13e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0001764;3.81e-21;1!UBERON:0001825;3.81e-21;1!UBERON:0004903;2.87e-11;2!UBERON:0002173;2.87e-11;2!UBERON:0002186;2.87e-11;2!UBERON:0002240;6.13e-08;3!UBERON:0002110;6.13e-08;3!UBERON:0004821;6.13e-08;3!UBERON:0007499;6.13e-08;3!UBERON:0005174;6.13e-08;3!UBERON:0003215;6.13e-08;3!UBERON:0010368;6.13e-08;3!UBERON:0009911;6.13e-08;3!UBERON:0002299;6.13e-08;3!UBERON:0006524;6.13e-08;3!UBERON:0008874;6.13e-08;3!UBERON:0001137;6.13e-08;3!UBERON:0002169;6.13e-08;3!UBERON:0004894;6.13e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,7.72e-21,1;UBERON:0001825,7.72e-21,1;UBERON:0004903,2.73e-11,2;UBERON:0002173,2.73e-11,2;UBERON:0002186,2.73e-11,2;UBERON:0004821,5.93e-08,3;UBERON:0003215,5.93e-08,3;UBERON:0010368,5.93e-08,3;UBERON:0009911,5.93e-08,3;UBERON:0002299,5.93e-08,3;UBERON:0006524,5.93e-08,3;UBERON:0008874,5.93e-08,3;UBERON:0002169,5.93e-08,3;UBERON:0004894,5.93e-08,3;UBERON:0002240,6.34e-08,3;UBERON:0005174,6.34e-08,3;UBERON:0001137,6.34e-08,3;UBERON:0002110,6.78e-08,3;UBERON:0006242,6.78e-08,3 | |||
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|short_description=p@chr8:89856204..89856207,- | |short_description=p@chr8:89856204..89856207,- | ||
}} | }} |
Latest revision as of 20:23, 31 July 2015
Short description: | p@chr8:89856204..89856207, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:89856204..89856207, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 3.35e-11 | 2 |
pneumocyte | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 7.72e-21 | 1 |
paranasal sinus | 7.72e-21 | 1 |
bronchoalveolar duct junction | 2.73e-11 | 2 |
alveolar duct | 2.73e-11 | 2 |
bronchiole | 2.73e-11 | 2 |
pulmonary alveolus epithelium | 5.93e-08 | 3 |
alveolus | 5.93e-08 | 3 |
pulmonary lobule | 5.93e-08 | 3 |
lobule | 5.93e-08 | 3 |
alveolus of lung | 5.93e-08 | 3 |
alveolar system | 5.93e-08 | 3 |
pulmonary acinus | 5.93e-08 | 3 |
alveolar sac | 5.93e-08 | 3 |
alveolar wall | 5.93e-08 | 3 |
spinal cord | 6.34e-08 | 3 |
dorsal region element | 6.34e-08 | 3 |
dorsum | 6.34e-08 | 3 |
gallbladder | 6.78e-08 | 3 |
gall bladder primordium | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 7.72e-21 | 1 |
maxillary sinus cancer | 7.72e-21 | 1 |
islet cell tumor | 9.43e-21 | 1 |
endocrine pancreas cancer | 9.43e-21 | 1 |
pancreatic endocrine carcinoma | 9.43e-21 | 1 |
lung adenocarcinoma | 2.73e-11 | 2 |