FFCP PHASE1:Hg19::chr8:70963473..70963506,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:70963473..70963506,- | |||
|coexpression_cluster_id=C595 | |||
|description=CAGE_peak_at_chr8:70963473..70963506,- | |description=CAGE_peak_at_chr8:70963473..70963506,- | ||
|id=chr8:70963473..70963506,- | |id=chr8:70963473..70963506,- | ||
|ontology_enrichment_celltype=CL:0002322!4.33e-58!5;CL:0000039!2.90e-27!7;CL:0000586!2.90e-27!7;CL:0000540!6.31e-18!6;CL:0000031!6.31e-18!6;CL:0000404!6.31e-18!6;CL:0000047!1.32e-13!8;CL:0000148!3.88e-11!10;CL:0000541!3.88e-11!10;CL:0000147!4.16e-08!14 | |ontology_enrichment_celltype=CL:0002322!4.33e-58!5;CL:0000039!2.90e-27!7;CL:0000586!2.90e-27!7;CL:0000540!6.31e-18!6;CL:0000031!6.31e-18!6;CL:0000404!6.31e-18!6;CL:0000047!1.32e-13!8;CL:0000148!3.88e-11!10;CL:0000541!3.88e-11!10;CL:0000147!4.16e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.02e-32;7!CL:0000586;3.02e-32;7!CL:0002322;1.10e-20;5!CL:0002321;1.49e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.19e-32,7;CL:0000586,3.19e-32,7;CL:0002322,1.34e-20,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.46e-40;10!UBERON:0005564;7.46e-40;10 | |||
|ontology_enrichment_disease=DOID:3095!3.81e-19!22;DOID:2994!3.81e-19!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.77e-28;22!DOID:2994;2.77e-28;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.47e-28,22;DOID:2994,2.47e-28,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.64e-24!8;UBERON:0003135!1.77e-17!11;UBERON:0000991!4.12e-14!21;UBERON:0009196!4.12e-14!21;UBERON:0009117!4.12e-14!21;UBERON:0005564!4.12e-14!21;UBERON:0004176!1.81e-13!22;UBERON:0003101!7.34e-09!22;UBERON:0000079!7.34e-09!22 | |ontology_enrichment_uberon=UBERON:0000473!6.64e-24!8;UBERON:0003135!1.77e-17!11;UBERON:0000991!4.12e-14!21;UBERON:0009196!4.12e-14!21;UBERON:0009117!4.12e-14!21;UBERON:0005564!4.12e-14!21;UBERON:0004176!1.81e-13!22;UBERON:0003101!7.34e-09!22;UBERON:0000079!7.34e-09!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.49e-28;8!UBERON:0003135;7.74e-21;11!UBERON:0000991;2.62e-19;21!UBERON:0003101;8.62e-11;22!UBERON:0000079;8.62e-11;22!UBERON:0002323;7.01e-08;45!UBERON:0000922;7.66e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.62e-28,8;UBERON:0003135,8.01e-21,11;UBERON:0000991,2.68e-19,21;UBERON:0009196,2.68e-19,21;UBERON:0009117,2.68e-19,21;UBERON:0005564,2.68e-19,21;UBERON:0004176,1.91e-18,22;UBERON:0003101,8.77e-11,22;UBERON:0000079,8.77e-11,22;UBERON:0002323,4.61e-09,46;UBERON:0003133,1.06e-08,48;UBERON:0004458,1.57e-08,49;UBERON:0003886,8.93e-08,54;UBERON:0005156,3.80e-07,59;UBERON:0000990,3.80e-07,59;UBERON:0002553,6.36e-07,61 | |||
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|short_description=p@chr8:70963473..70963506,- | |short_description=p@chr8:70963473..70963506,- | ||
}} | }} |
Latest revision as of 19:42, 31 July 2015
Short description: | p@chr8:70963473..70963506, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:70963473..70963506, - |
Coexpression cluster: | C595_teratocarcinoma_HES3GFP_H9_testicular_Wilms_hepatoblastoma_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.19e-32 | 7 |
germ cell | 3.19e-32 | 7 |
embryonic stem cell | 1.34e-20 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 2.62e-28 | 8 |
male reproductive organ | 8.01e-21 | 11 |
gonad | 2.68e-19 | 21 |
indifferent external genitalia | 2.68e-19 | 21 |
indifferent gonad | 2.68e-19 | 21 |
gonad primordium | 2.68e-19 | 21 |
external genitalia | 1.91e-18 | 22 |
male organism | 8.77e-11 | 22 |
male reproductive system | 8.77e-11 | 22 |
body cavity | 4.61e-09 | 46 |
reproductive organ | 1.06e-08 | 48 |
body cavity or lining | 1.57e-08 | 49 |
body cavity precursor | 8.93e-08 | 54 |
reproductive structure | 3.80e-07 | 59 |
reproductive system | 3.80e-07 | 59 |
anatomical cavity | 6.36e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.47e-28 | 22 |
germ cell cancer | 2.47e-28 | 22 |