FFCP PHASE1:Hg19::chr8:57354262..57354270,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:57354262..57354270,+ | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_at_chr8:57354262..57354270,+ | |description=CAGE_peak_at_chr8:57354262..57354270,+ | ||
|id=chr8:57354262..57354270,+ | |id=chr8:57354262..57354270,+ | ||
|ontology_enrichment_celltype=CL:0000153!4.23e-27!9;CL:0000447!4.23e-27!9;CL:0000499!2.21e-23!27;CL:0000667!6.57e-19!6;CL:0000058!6.57e-19!6;CL:0000138!6.57e-19!6;CL:0000327!2.98e-17!14;CL:0002552!1.35e-12!5;CL:0002556!6.46e-11!6;CL:0000135!4.58e-10!3;CL:0000386!4.58e-10!3;CL:0000388!4.58e-10!3;CL:0000214!6.57e-10!3;CL:0002622!1.40e-09!3 | |ontology_enrichment_celltype=CL:0000153!4.23e-27!9;CL:0000447!4.23e-27!9;CL:0000499!2.21e-23!27;CL:0000667!6.57e-19!6;CL:0000058!6.57e-19!6;CL:0000138!6.57e-19!6;CL:0000327!2.98e-17!14;CL:0002552!1.35e-12!5;CL:0002556!6.46e-11!6;CL:0000135!4.58e-10!3;CL:0000386!4.58e-10!3;CL:0000388!4.58e-10!3;CL:0000214!6.57e-10!3;CL:0002622!1.40e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000138;1.17e-58;6!CL:0000153;2.41e-39;9!CL:0000447;2.41e-39;9!CL:0000327;7.51e-24;15!CL:0000499;5.28e-13;28!CL:0000151;6.99e-09;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.82e-58,6;CL:0000138,1.82e-58,6;CL:0000153,3.25e-39,9;CL:0000447,3.25e-39,9;CL:0000327,8.97e-24,15;CL:0000499,5.80e-13,28;CL:0000151,3.59e-10,36 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.06e-23;1!UBERON:0003852;1.06e-23;1!UBERON:0005062;6.50e-07;4!UBERON:0007284;6.50e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;2.59e-12;2!DOID:962;2.59e-12;2!DOID:3307;2.59e-12;2!DOID:1192;1.21e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.85e-12,2;DOID:3193,2.90e-12,2;DOID:962,2.90e-12,2;DOID:1192,1.30e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001758!6.46e-11!6;UBERON:0003672!6.46e-11!6;UBERON:0003129!2.63e-10!11;UBERON:0000043!4.58e-10!3;UBERON:0006915!6.57e-10!3;UBERON:0002018!6.57e-10!3;UBERON:0002217!6.57e-10!3;UBERON:0007616!6.57e-10!3;UBERON:0005383!1.12e-09!3;UBERON:0005382!1.12e-09!3;UBERON:0000075!9.79e-09!13;UBERON:0005944!9.79e-09!13;UBERON:0004288!9.79e-09!13;UBERON:0003089!9.79e-09!13;UBERON:0005705!1.65e-08!1;UBERON:0008193!1.65e-08!1;UBERON:0002514!1.65e-08!1;UBERON:0003462!1.65e-08!1;UBERON:0008001!1.65e-08!1;UBERON:0007914!1.65e-08!1;UBERON:0003457!1.65e-08!1;UBERON:0009292!1.65e-08!1;UBERON:0007375!1.65e-08!1;UBERON:0003323!1.65e-08!1;UBERON:0002397!1.65e-08!1;UBERON:0001709!1.65e-08!1;UBERON:0004066!1.65e-08!1;UBERON:0002244!1.65e-08!1;UBERON:0005620!1.65e-08!1;UBERON:0004068!1.65e-08!1;UBERON:0004362!1.65e-08!1;UBERON:0000165!3.35e-08!28;UBERON:0000930!3.35e-08!28;UBERON:0001828!4.68e-08!8;UBERON:0001874!8.12e-08!1;UBERON:0002363!1.14e-07!1;UBERON:0007647!1.14e-07!1;UBERON:0010115!1.14e-07!1;UBERON:0000369!1.81e-07!4;UBERON:0002435!1.81e-07!4;UBERON:0000204!1.81e-07!4;UBERON:0010082!1.81e-07!4 | |ontology_enrichment_uberon=UBERON:0001758!6.46e-11!6;UBERON:0003672!6.46e-11!6;UBERON:0003129!2.63e-10!11;UBERON:0000043!4.58e-10!3;UBERON:0006915!6.57e-10!3;UBERON:0002018!6.57e-10!3;UBERON:0002217!6.57e-10!3;UBERON:0007616!6.57e-10!3;UBERON:0005383!1.12e-09!3;UBERON:0005382!1.12e-09!3;UBERON:0000075!9.79e-09!13;UBERON:0005944!9.79e-09!13;UBERON:0004288!9.79e-09!13;UBERON:0003089!9.79e-09!13;UBERON:0005705!1.65e-08!1;UBERON:0008193!1.65e-08!1;UBERON:0002514!1.65e-08!1;UBERON:0003462!1.65e-08!1;UBERON:0008001!1.65e-08!1;UBERON:0007914!1.65e-08!1;UBERON:0003457!1.65e-08!1;UBERON:0009292!1.65e-08!1;UBERON:0007375!1.65e-08!1;UBERON:0003323!1.65e-08!1;UBERON:0002397!1.65e-08!1;UBERON:0001709!1.65e-08!1;UBERON:0004066!1.65e-08!1;UBERON:0002244!1.65e-08!1;UBERON:0005620!1.65e-08!1;UBERON:0004068!1.65e-08!1;UBERON:0004362!1.65e-08!1;UBERON:0000165!3.35e-08!28;UBERON:0000930!3.35e-08!28;UBERON:0001828!4.68e-08!8;UBERON:0001874!8.12e-08!1;UBERON:0002363!1.14e-07!1;UBERON:0007647!1.14e-07!1;UBERON:0010115!1.14e-07!1;UBERON:0000369!1.81e-07!4;UBERON:0002435!1.81e-07!4;UBERON:0000204!1.81e-07!4;UBERON:0010082!1.81e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0005705;1.06e-23;1!UBERON:0008193;1.06e-23;1!UBERON:0010912;1.06e-23;1!UBERON:0002514;1.06e-23;1!UBERON:0003457;1.06e-23;1!UBERON:0008907;1.06e-23;1!UBERON:0008001;1.06e-23;1!UBERON:0007213;1.06e-23;1!UBERON:0009891;1.06e-23;1!UBERON:0007914;1.06e-23;1!UBERON:0007375;1.06e-23;1!UBERON:0003323;1.06e-23;1!UBERON:0010258;1.06e-23;1!UBERON:0005253;1.06e-23;1!UBERON:0007842;1.06e-23;1!UBERON:0002397;1.06e-23;1!UBERON:0003113;1.06e-23;1!UBERON:0003277;1.06e-23;1!UBERON:0001709;1.06e-23;1!UBERON:0002244;1.06e-23;1!UBERON:0005620;1.06e-23;1!UBERON:0010364;1.06e-23;1!UBERON:0004288;1.06e-23;1!UBERON:0004089;1.48e-12;2!UBERON:0003714;2.59e-12;2!UBERON:0011137;4.80e-09;11!UBERON:0010323;4.80e-09;11!UBERON:0001708;6.50e-07;4!UBERON:0008895;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,1.07e-23,1;UBERON:0008193,1.07e-23,1;UBERON:0010912,1.07e-23,1;UBERON:0002514,1.07e-23,1;UBERON:0003457,1.07e-23,1;UBERON:0008907,1.07e-23,1;UBERON:0008001,1.07e-23,1;UBERON:0007213,1.07e-23,1;UBERON:0009891,1.07e-23,1;UBERON:0007914,1.07e-23,1;UBERON:0009292,1.07e-23,1;UBERON:0003099,1.07e-23,1;UBERON:0007375,1.07e-23,1;UBERON:0003323,1.07e-23,1;UBERON:0010258,1.07e-23,1;UBERON:0007842,1.07e-23,1;UBERON:0009494,1.07e-23,1;UBERON:0010042,1.07e-23,1;UBERON:0010045,1.07e-23,1;UBERON:0010259,1.07e-23,1;UBERON:0010359,1.07e-23,1;UBERON:0009526,1.07e-23,1;UBERON:0002397,1.07e-23,1;UBERON:0003113,1.07e-23,1;UBERON:0003277,1.07e-23,1;UBERON:0001709,1.07e-23,1;UBERON:0004066,1.07e-23,1;UBERON:0002244,1.07e-23,1;UBERON:0005620,1.07e-23,1;UBERON:0004362,1.07e-23,1;UBERON:0010364,1.07e-23,1;UBERON:0010046,1.07e-23,1;UBERON:0005868,1.07e-23,1;UBERON:0007238,1.07e-23,1;UBERON:0004288,1.07e-23,1;UBERON:0004068,1.07e-23,1;UBERON:0010334,1.07e-23,1;UBERON:0003852,1.07e-23,1;UBERON:0010253,1.07e-23,1;UBERON:0005253,1.48e-12,2;UBERON:0004089,1.48e-12,2;UBERON:0003714,2.90e-12,2;UBERON:0010323,4.61e-09,11;UBERON:0000165,1.59e-07,29;UBERON:0000930,1.59e-07,29;UBERON:0011137,2.60e-07,14;UBERON:0001708,6.50e-07,4;UBERON:0008895,6.50e-07,4 | |||
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|short_description=p@chr8:57354262..57354270,+ | |short_description=p@chr8:57354262..57354270,+ | ||
}} | }} |
Latest revision as of 19:02, 31 July 2015
Short description: | p@chr8:57354262..57354270, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:57354262..57354270, + |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.82e-58 | 6 |
chondrocyte | 1.82e-58 | 6 |
GAG secreting cell | 3.25e-39 | 9 |
carbohydrate secreting cell | 3.25e-39 | 9 |
extracellular matrix secreting cell | 8.97e-24 | 15 |
stromal cell | 5.80e-13 | 28 |
secretory cell | 3.59e-10 | 36 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.85e-12 | 2 |
peripheral nerve sheath neoplasm | 2.90e-12 | 2 |
neurofibroma | 2.90e-12 | 2 |
peripheral nervous system neoplasm | 1.30e-08 | 3 |