FFCP PHASE1:Hg19::chr8:57354119..57354137,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:57354119..57354137,+ | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_at_chr8:57354119..57354137,+ | |description=CAGE_peak_at_chr8:57354119..57354137,+ | ||
|id=chr8:57354119..57354137,+ | |id=chr8:57354119..57354137,+ | ||
|ontology_enrichment_celltype=CL:0000667!8.02e-17!6;CL:0000058!8.02e-17!6;CL:0000138!8.02e-17!6;CL:0000153!1.00e-15!9;CL:0000447!1.00e-15!9;CL:0000135!7.17e-13!3;CL:0000386!7.17e-13!3;CL:0000388!7.17e-13!3;CL:0000499!1.68e-10!27;CL:0000327!7.57e-10!14;CL:0002552!1.50e-07!5 | |ontology_enrichment_celltype=CL:0000667!8.02e-17!6;CL:0000058!8.02e-17!6;CL:0000138!8.02e-17!6;CL:0000153!1.00e-15!9;CL:0000447!1.00e-15!9;CL:0000135!7.17e-13!3;CL:0000386!7.17e-13!3;CL:0000388!7.17e-13!3;CL:0000499!1.68e-10!27;CL:0000327!7.57e-10!14;CL:0002552!1.50e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.19e-39;3!CL:0000388;1.19e-39;3!CL:0000153;3.92e-24;9!CL:0000447;3.92e-24;9!CL:0000499;1.16e-22;28!CL:0000138;6.15e-21;6!CL:0000327;1.28e-14;15!CL:0002556;8.86e-10;6!CL:0000062;6.79e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,9.77e-40,3;CL:0000388,9.77e-40,3;CL:0000153,4.17e-24,9;CL:0000447,4.17e-24,9;CL:0000499,1.14e-22,28;CL:0000058,6.37e-21,6;CL:0000138,6.37e-21,6;CL:0000327,1.33e-14,15;CL:0002556,7.42e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0003099;4.72e-15;1!UBERON:0003852;4.72e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000043!7.17e-13!3;UBERON:0000369!3.21e-09!4;UBERON:0002435!3.21e-09!4;UBERON:0000204!3.21e-09!4;UBERON:0010082!3.21e-09!4;UBERON:0002308!8.38e-07!9;UBERON:0000125!8.38e-07!9 | |ontology_enrichment_uberon=UBERON:0000043!7.17e-13!3;UBERON:0000369!3.21e-09!4;UBERON:0002435!3.21e-09!4;UBERON:0000204!3.21e-09!4;UBERON:0010082!3.21e-09!4;UBERON:0002308!8.38e-07!9;UBERON:0000125!8.38e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.19e-39;3!UBERON:0000043;1.19e-39;3!UBERON:0007845;1.19e-39;3!UBERON:0005705;4.72e-15;1!UBERON:0008193;4.72e-15;1!UBERON:0010912;4.72e-15;1!UBERON:0002514;4.72e-15;1!UBERON:0003457;4.72e-15;1!UBERON:0008907;4.72e-15;1!UBERON:0008001;4.72e-15;1!UBERON:0007213;4.72e-15;1!UBERON:0009891;4.72e-15;1!UBERON:0007914;4.72e-15;1!UBERON:0007375;4.72e-15;1!UBERON:0003323;4.72e-15;1!UBERON:0010258;4.72e-15;1!UBERON:0005253;4.72e-15;1!UBERON:0007842;4.72e-15;1!UBERON:0002397;4.72e-15;1!UBERON:0003113;4.72e-15;1!UBERON:0003277;4.72e-15;1!UBERON:0001709;4.72e-15;1!UBERON:0002244;4.72e-15;1!UBERON:0005620;4.72e-15;1!UBERON:0010364;4.72e-15;1!UBERON:0004288;4.72e-15;1!UBERON:0001874;1.97e-14;1!UBERON:0011137;1.47e-11;11!UBERON:0010323;1.47e-11;11!UBERON:0001758;8.86e-10;6!UBERON:0003672;8.86e-10;6!UBERON:0003129;1.65e-08;7!UBERON:0004089;3.56e-08;2!UBERON:0000075;4.07e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,9.77e-40,3;UBERON:0000043,9.77e-40,3;UBERON:0007845,9.77e-40,3;UBERON:0005705,4.73e-15,1;UBERON:0008193,4.73e-15,1;UBERON:0010912,4.73e-15,1;UBERON:0002514,4.73e-15,1;UBERON:0003457,4.73e-15,1;UBERON:0008907,4.73e-15,1;UBERON:0008001,4.73e-15,1;UBERON:0007213,4.73e-15,1;UBERON:0009891,4.73e-15,1;UBERON:0007914,4.73e-15,1;UBERON:0009292,4.73e-15,1;UBERON:0003099,4.73e-15,1;UBERON:0007375,4.73e-15,1;UBERON:0003323,4.73e-15,1;UBERON:0010258,4.73e-15,1;UBERON:0007842,4.73e-15,1;UBERON:0009494,4.73e-15,1;UBERON:0010042,4.73e-15,1;UBERON:0010045,4.73e-15,1;UBERON:0010259,4.73e-15,1;UBERON:0010359,4.73e-15,1;UBERON:0009526,4.73e-15,1;UBERON:0002397,4.73e-15,1;UBERON:0003113,4.73e-15,1;UBERON:0003277,4.73e-15,1;UBERON:0001709,4.73e-15,1;UBERON:0004066,4.73e-15,1;UBERON:0002244,4.73e-15,1;UBERON:0005620,4.73e-15,1;UBERON:0004362,4.73e-15,1;UBERON:0010364,4.73e-15,1;UBERON:0010046,4.73e-15,1;UBERON:0005868,4.73e-15,1;UBERON:0007238,4.73e-15,1;UBERON:0004288,4.73e-15,1;UBERON:0004068,4.73e-15,1;UBERON:0010334,4.73e-15,1;UBERON:0003852,4.73e-15,1;UBERON:0010253,4.73e-15,1;UBERON:0001874,2.75e-14,1;UBERON:0010323,1.27e-11,11;UBERON:0001758,7.42e-10,6;UBERON:0003672,7.42e-10,6;UBERON:0011137,2.99e-09,14;UBERON:0003129,1.42e-08,7;UBERON:0005253,3.56e-08,2;UBERON:0004089,3.56e-08,2;UBERON:0000075,3.69e-08,16;UBERON:0000165,1.32e-07,29;UBERON:0000930,1.32e-07,29 | |||
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| ||
|short_description=p@chr8:57354119..57354137,+ | |short_description=p@chr8:57354119..57354137,+ | ||
}} | }} |
Latest revision as of 19:02, 31 July 2015
Short description: | p@chr8:57354119..57354137, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:57354119..57354137, + |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 9.77e-40 | 3 |
tendon cell | 9.77e-40 | 3 |
GAG secreting cell | 4.17e-24 | 9 |
carbohydrate secreting cell | 4.17e-24 | 9 |
stromal cell | 1.14e-22 | 28 |
chondroblast | 6.37e-21 | 6 |
chondrocyte | 6.37e-21 | 6 |
extracellular matrix secreting cell | 1.33e-14 | 15 |
fibroblast of periodontium | 7.42e-10 | 6 |