FFCP PHASE1:Hg19::chr8:57353804..57353821,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:57353804..57353821,- | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_at_chr8:57353804..57353821,- | |description=CAGE_peak_at_chr8:57353804..57353821,- | ||
|id=chr8:57353804..57353821,- | |id=chr8:57353804..57353821,- | ||
|ontology_enrichment_celltype=CL:0000667!9.97e-23!6;CL:0000058!9.97e-23!6;CL:0000138!9.97e-23!6;CL:0000153!4.36e-21!9;CL:0000447!4.36e-21!9;CL:0000327!2.41e-13!14;CL:0000499!1.56e-11!27;CL:0002552!4.12e-10!5;CL:0002556!1.09e-08!6;CL:0000135!4.09e-08!3;CL:0000386!4.09e-08!3;CL:0000388!4.09e-08!3 | |ontology_enrichment_celltype=CL:0000667!9.97e-23!6;CL:0000058!9.97e-23!6;CL:0000138!9.97e-23!6;CL:0000153!4.36e-21!9;CL:0000447!4.36e-21!9;CL:0000327!2.41e-13!14;CL:0000499!1.56e-11!27;CL:0002552!4.12e-10!5;CL:0002556!1.09e-08!6;CL:0000135!4.09e-08!3;CL:0000386!4.09e-08!3;CL:0000388!4.09e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000138;8.03e-43;6!CL:0000153;7.15e-29;9!CL:0000447;7.15e-29;9!CL:0000327;1.13e-17;15!CL:0000499;1.28e-16;28!CL:0000135;1.09e-10;3!CL:0000388;1.09e-10;3!CL:0002552;5.23e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,8.63e-43,6;CL:0000138,8.63e-43,6;CL:0000153,7.50e-29,9;CL:0000447,7.50e-29,9;CL:0000327,1.17e-17,15;CL:0000499,1.31e-16,28;CL:0000135,1.09e-10,3;CL:0000388,1.09e-10,3;CL:0000151,8.95e-08,36;CL:0002552,5.38e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003099;7.48e-30;1!UBERON:0003852;7.48e-30;1!UBERON:0005062;1.70e-08;4!UBERON:0007284;1.70e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;2.43e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000369!1.18e-11!4;UBERON:0002435!1.18e-11!4;UBERON:0000204!1.18e-11!4;UBERON:0010082!1.18e-11!4;UBERON:0001758!1.09e-08!6;UBERON:0003672!1.09e-08!6;UBERON:0003129!4.07e-08!11;UBERON:0000043!4.09e-08!3;UBERON:0005383!1.73e-07!3;UBERON:0005382!1.73e-07!3;UBERON:0005705!5.58e-07!1;UBERON:0008193!5.58e-07!1;UBERON:0002514!5.58e-07!1;UBERON:0003462!5.58e-07!1;UBERON:0008001!5.58e-07!1;UBERON:0007914!5.58e-07!1;UBERON:0003457!5.58e-07!1;UBERON:0009292!5.58e-07!1;UBERON:0007375!5.58e-07!1;UBERON:0003323!5.58e-07!1;UBERON:0002397!5.58e-07!1;UBERON:0001709!5.58e-07!1;UBERON:0004066!5.58e-07!1;UBERON:0002244!5.58e-07!1;UBERON:0005620!5.58e-07!1;UBERON:0004068!5.58e-07!1;UBERON:0004362!5.58e-07!1;UBERON:0000075!7.17e-07!13;UBERON:0005944!7.17e-07!13;UBERON:0004288!7.17e-07!13;UBERON:0003089!7.17e-07!13;UBERON:0009663!7.31e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;7.48e-30;1!UBERON:0008193;7.48e-30;1!UBERON:0010912;7.48e-30;1!UBERON:0002514;7.48e-30;1!UBERON:0003457;7.48e-30;1!UBERON:0008907;7.48e-30;1!UBERON:0008001;7.48e-30;1!UBERON:0007213;7.48e-30;1!UBERON:0009891;7.48e-30;1!UBERON:0007914;7.48e-30;1!UBERON:0007375;7.48e-30;1!UBERON:0003323;7.48e-30;1!UBERON:0010258;7.48e-30;1!UBERON:0005253;7.48e-30;1!UBERON:0007842;7.48e-30;1!UBERON:0002397;7.48e-30;1!UBERON:0003113;7.48e-30;1!UBERON:0003277;7.48e-30;1!UBERON:0001709;7.48e-30;1!UBERON:0002244;7.48e-30;1!UBERON:0005620;7.48e-30;1!UBERON:0010364;7.48e-30;1!UBERON:0004288;7.48e-30;1!UBERON:0004089;1.15e-15;2!UBERON:0007846;1.09e-10;3!UBERON:0000043;1.09e-10;3!UBERON:0007845;1.09e-10;3!UBERON:0001708;1.70e-08;4!UBERON:0008895;1.70e-08;4!UBERON:0011159;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,7.48e-30,1;UBERON:0008193,7.48e-30,1;UBERON:0010912,7.48e-30,1;UBERON:0002514,7.48e-30,1;UBERON:0003457,7.48e-30,1;UBERON:0008907,7.48e-30,1;UBERON:0008001,7.48e-30,1;UBERON:0007213,7.48e-30,1;UBERON:0009891,7.48e-30,1;UBERON:0007914,7.48e-30,1;UBERON:0009292,7.48e-30,1;UBERON:0003099,7.48e-30,1;UBERON:0007375,7.48e-30,1;UBERON:0003323,7.48e-30,1;UBERON:0010258,7.48e-30,1;UBERON:0007842,7.48e-30,1;UBERON:0009494,7.48e-30,1;UBERON:0010042,7.48e-30,1;UBERON:0010045,7.48e-30,1;UBERON:0010259,7.48e-30,1;UBERON:0010359,7.48e-30,1;UBERON:0009526,7.48e-30,1;UBERON:0002397,7.48e-30,1;UBERON:0003113,7.48e-30,1;UBERON:0003277,7.48e-30,1;UBERON:0001709,7.48e-30,1;UBERON:0004066,7.48e-30,1;UBERON:0002244,7.48e-30,1;UBERON:0005620,7.48e-30,1;UBERON:0004362,7.48e-30,1;UBERON:0010364,7.48e-30,1;UBERON:0010046,7.48e-30,1;UBERON:0005868,7.48e-30,1;UBERON:0007238,7.48e-30,1;UBERON:0004288,7.48e-30,1;UBERON:0004068,7.48e-30,1;UBERON:0010334,7.48e-30,1;UBERON:0003852,7.48e-30,1;UBERON:0010253,7.48e-30,1;UBERON:0005253,1.15e-15,2;UBERON:0004089,1.15e-15,2;UBERON:0007846,1.09e-10,3;UBERON:0000043,1.09e-10,3;UBERON:0007845,1.09e-10,3;UBERON:0001708,1.70e-08,4;UBERON:0008895,1.70e-08,4;UBERON:0011159,4.79e-07,5 | |||
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|short_description=p@chr8:57353804..57353821,- | |short_description=p@chr8:57353804..57353821,- | ||
}} | }} |
Latest revision as of 19:01, 31 July 2015
Short description: | p@chr8:57353804..57353821, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:57353804..57353821, - |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 8.63e-43 | 6 |
chondrocyte | 8.63e-43 | 6 |
GAG secreting cell | 7.50e-29 | 9 |
carbohydrate secreting cell | 7.50e-29 | 9 |
extracellular matrix secreting cell | 1.17e-17 | 15 |
stromal cell | 1.31e-16 | 28 |
fibrocyte | 1.09e-10 | 3 |
tendon cell | 1.09e-10 | 3 |
secretory cell | 8.95e-08 | 36 |
fibroblast of gingiva | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.26e-08 | 4 |