FFCP PHASE1:Hg19::chr8:42033578..42033605,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:42033578..42033605,- | |||
|coexpression_cluster_id=C471 | |||
|description=CAGE_peak_at_chr8:42033578..42033605,- | |description=CAGE_peak_at_chr8:42033578..42033605,- | ||
|id=chr8:42033578..42033605,- | |id=chr8:42033578..42033605,- | ||
|ontology_enrichment_celltype=CL:0000192!2.89e-24!42;CL:0000514!2.89e-24!42;CL:0000680!1.36e-21!57;CL:0000056!1.36e-21!57;CL:0000355!1.36e-21!57;CL:0000183!6.23e-21!59;CL:0000055!2.23e-20!180;CL:0000359!2.32e-20!32;CL:0000187!2.49e-20!54;CL:0000393!1.27e-17!60;CL:0000211!1.27e-17!60;CL:0000222!9.18e-16!119;CL:0000220!1.64e-10!246;CL:0002321!3.35e-10!248;CL:0000057!1.38e-08!75;CL:0002334!7.37e-08!12;CL:0002539!3.09e-07!10 | |ontology_enrichment_celltype=CL:0000192!2.89e-24!42;CL:0000514!2.89e-24!42;CL:0000680!1.36e-21!57;CL:0000056!1.36e-21!57;CL:0000355!1.36e-21!57;CL:0000183!6.23e-21!59;CL:0000055!2.23e-20!180;CL:0000359!2.32e-20!32;CL:0000187!2.49e-20!54;CL:0000393!1.27e-17!60;CL:0000211!1.27e-17!60;CL:0000222!9.18e-16!119;CL:0000220!1.64e-10!246;CL:0002321!3.35e-10!248;CL:0000057!1.38e-08!75;CL:0002334!7.37e-08!12;CL:0002539!3.09e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.94e-18;32!CL:0000192;2.19e-15;43!CL:1000306;1.54e-12;4!CL:0002547;1.54e-12;4!CL:0002595;6.82e-11;5!CL:0002539;6.22e-10;10!CL:0002622;4.62e-09;3!CL:0002593;1.30e-07;2!CL:0000187;2.66e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.16e-18,43;CL:0000514,3.16e-18,43;CL:0000359,8.12e-18,32;CL:0000187,7.03e-15,55;CL:0000680,7.36e-14,58;CL:0000056,7.36e-14,58;CL:0000355,7.36e-14,58;CL:0000393,6.08e-13,61;CL:0000211,6.08e-13,61;CL:1000306,2.36e-12,4;CL:0002547,2.36e-12,4;CL:0002595,6.87e-11,5;CL:0000222,5.06e-10,121;CL:0002539,8.38e-10,10;CL:0002622,1.81e-09,3;CL:0002593,1.31e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;2.19e-15;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.75e-11;3!DOID:127;6.75e-11;3!DOID:2394;6.60e-10;14!DOID:0060072;2.99e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.80e-11,3;DOID:127,6.80e-11,3;DOID:2394,5.34e-10,14;DOID:0060072,3.01e-08,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;1.27e-21;33!UBERON:0004571;1.27e-21;33!UBERON:0001637;4.25e-16;42!UBERON:0003509;4.25e-16;42!UBERON:0004572;4.25e-16;42!UBERON:0004797;1.54e-12;4!UBERON:0000415;1.54e-12;4!UBERON:0007240;1.54e-12;4!UBERON:0005742;1.54e-12;4!UBERON:0005734;1.54e-12;4!UBERON:0004664;1.54e-12;4!UBERON:0004663;1.54e-12;4!UBERON:0000947;3.84e-12;21!UBERON:0010191;3.84e-12;21!UBERON:0001135;4.82e-11;15!UBERON:0003834;6.82e-11;5!UBERON:0001533;6.82e-11;5!UBERON:0004237;6.22e-10;10!UBERON:0004695;6.22e-10;10!UBERON:0002111;6.22e-10;10!UBERON:0004178;6.22e-10;10!UBERON:0007500;2.15e-08;56!UBERON:0001981;2.15e-08;56!UBERON:0004537;2.15e-08;56!UBERON:0003937;2.64e-08;12!UBERON:0005399;2.64e-08;12!UBERON:0003513;9.34e-08;7!UBERON:0002456;1.30e-07;2!UBERON:0003914;8.82e-07;74 | |||
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| ||
|short_description=p@chr8:42033578..42033605,- | |short_description=p@chr8:42033578..42033605,- | ||
}} | }} |
Latest revision as of 18:29, 31 July 2015
Short description: | p@chr8:42033578..42033605, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:42033578..42033605, - |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.16e-18 | 43 |
smooth muscle myoblast | 3.16e-18 | 43 |
vascular associated smooth muscle cell | 8.12e-18 | 32 |
muscle cell | 7.03e-15 | 55 |
muscle precursor cell | 7.36e-14 | 58 |
myoblast | 7.36e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.36e-14 | 58 |
electrically responsive cell | 6.08e-13 | 61 |
electrically active cell | 6.08e-13 | 61 |
fibroblast of tunica adventitia of artery | 2.36e-12 | 4 |
fibroblast of the aortic adventitia | 2.36e-12 | 4 |
smooth muscle cell of the subclavian artery | 6.87e-11 | 5 |
mesodermal cell | 5.06e-10 | 121 |
aortic smooth muscle cell | 8.38e-10 | 10 |
prostate stromal cell | 1.81e-09 | 3 |
smooth muscle cell of the internal thoracic artery | 1.31e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.80e-11 | 3 |
leiomyoma | 6.80e-11 | 3 |
ovarian cancer | 5.34e-10 | 14 |
benign neoplasm | 3.01e-08 | 4 |