FFCP PHASE1:Hg19::chr8:27457336..27457372,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:27457336..27457372,- | |||
|coexpression_cluster_id=C355 | |||
|description=CAGE_peak_at_chr8:27457336..27457372,- | |||
|id=chr8:27457336..27457372,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.77e-08;9!CL:0000447;1.77e-08;9!CL:0000138;4.64e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.39e-08,9;CL:0000447,1.39e-08,9;CL:0000058,5.24e-07,6;CL:0000138,5.24e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.09e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.46e-40!115;UBERON:0001017!2.12e-28!82;UBERON:0001049!4.91e-28!57;UBERON:0005068!4.91e-28!57;UBERON:0006241!4.91e-28!57;UBERON:0007135!4.91e-28!57;UBERON:0005743!6.79e-28!86;UBERON:0002616!1.92e-25!59;UBERON:0000955!4.47e-24!69;UBERON:0006238!4.47e-24!69;UBERON:0003075!7.80e-23!86;UBERON:0007284!7.80e-23!86;UBERON:0000073!8.13e-23!94;UBERON:0001016!8.13e-23!94;UBERON:0002780!3.72e-21!41;UBERON:0001890!3.72e-21!41;UBERON:0006240!3.72e-21!41;UBERON:0002346!1.60e-20!90;UBERON:0003080!3.26e-20!42;UBERON:0002020!2.53e-19!34;UBERON:0003528!2.53e-19!34;UBERON:0001893!6.63e-19!34;UBERON:0002791!1.92e-18!33;UBERON:0001869!1.05e-17!32;UBERON:0000033!1.29e-15!123;UBERON:0000153!1.54e-15!129;UBERON:0007811!1.54e-15!129;UBERON:0003056!1.94e-15!61;UBERON:0000956!2.17e-15!25;UBERON:0000203!2.17e-15!25;UBERON:0002619!7.38e-14!22;UBERON:0004121!2.14e-13!169;UBERON:0000477!6.25e-13!286;UBERON:0001950!1.55e-12!20;UBERON:0000924!2.45e-12!173;UBERON:0006601!2.45e-12!173;UBERON:0004111!1.06e-09!241;UBERON:0000468!1.76e-09!659;UBERON:0003076!5.65e-09!15;UBERON:0003057!5.65e-09!15;UBERON:0000062!8.63e-09!511;UBERON:0000025!3.04e-08!194;UBERON:0000064!3.36e-08!219;UBERON:0000475!3.85e-08!365;UBERON:0000467!1.37e-07!625;UBERON:0000480!1.83e-07!626;UBERON:0001871!7.07e-07!7;UBERON:0004733!7.66e-07!12;UBERON:0002028!7.66e-07!12;UBERON:0007277!7.66e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.20e-29;34!UBERON:0002791;7.77e-28;32!UBERON:0003528;9.47e-28;34!UBERON:0002020;9.47e-28;34!UBERON:0001869;1.29e-27;32!UBERON:0002780;5.03e-26;41!UBERON:0001890;5.03e-26;41!UBERON:0000073;1.80e-25;53!UBERON:0002616;1.80e-25;53!UBERON:0000956;8.27e-25;25!UBERON:0000203;8.27e-25;25!UBERON:0002619;1.37e-23;22!UBERON:0001950;7.17e-21;20!UBERON:0001017;3.33e-17;75!UBERON:0000955;1.34e-15;68!UBERON:0007023;5.64e-13;114!UBERON:0001016;1.09e-12;83!UBERON:0001871;5.82e-11;6!UBERON:0000125;2.25e-10;9!UBERON:0002308;2.25e-10;9!UBERON:0002420;2.27e-10;9!UBERON:0007245;2.27e-10;9!UBERON:0010009;2.27e-10;9!UBERON:0010011;2.27e-10;9!UBERON:0000454;2.27e-10;9!UBERON:0002298;4.98e-10;6!UBERON:0004733;1.27e-09;12!UBERON:0002028;1.27e-09;12!UBERON:0004732;1.00e-08;13!UBERON:0000349;2.30e-08;5!UBERON:0009663;1.44e-07;7!UBERON:0006947;9.22e-07;3!UBERON:0004054;9.22e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.19e-50,114;UBERON:0001049,2.24e-50,56;UBERON:0005068,2.24e-50,56;UBERON:0006241,2.24e-50,56;UBERON:0007135,2.24e-50,56;UBERON:0000073,7.81e-46,53;UBERON:0002616,7.81e-46,53;UBERON:0001017,1.50e-40,81;UBERON:0002780,4.45e-37,41;UBERON:0001890,4.45e-37,41;UBERON:0003080,4.45e-37,41;UBERON:0006240,4.45e-37,41;UBERON:0003075,2.95e-36,82;UBERON:0007284,2.95e-36,82;UBERON:0000955,4.00e-36,68;UBERON:0006238,4.00e-36,68;UBERON:0001016,6.44e-35,89;UBERON:0003528,3.36e-34,34;UBERON:0002020,3.36e-34,34;UBERON:0002346,7.66e-34,86;UBERON:0001893,2.23e-33,34;UBERON:0002791,2.39e-31,32;UBERON:0001869,6.47e-31,32;UBERON:0010371,2.55e-25,104;UBERON:0000956,2.98e-25,25;UBERON:0000203,2.98e-25,25;UBERON:0003056,1.73e-24,61;UBERON:0002619,3.39e-24,22;UBERON:0001950,1.74e-21,20;UBERON:0010314,6.38e-20,132;UBERON:0011216,7.19e-17,223;UBERON:0004121,1.59e-16,171;UBERON:0000924,1.59e-16,171;UBERON:0006601,1.59e-16,171;UBERON:0003076,5.37e-14,15;UBERON:0003057,5.37e-14,15;UBERON:0000025,7.05e-13,192;UBERON:0004111,8.72e-12,240;UBERON:0001871,2.40e-11,6;UBERON:0002420,2.26e-10,9;UBERON:0007245,2.26e-10,9;UBERON:0010009,2.26e-10,9;UBERON:0010011,2.26e-10,9;UBERON:0000454,2.26e-10,9;UBERON:0000125,2.59e-10,9;UBERON:0002308,2.59e-10,9;UBERON:0002298,3.98e-10,6;UBERON:0004733,8.54e-10,12;UBERON:0002028,8.54e-10,12;UBERON:0007277,8.54e-10,12;UBERON:0004732,6.98e-09,13;UBERON:0000349,2.35e-08,5;UBERON:0009663,1.54e-07,7;UBERON:0000483,2.91e-07,306;UBERON:0000119,4.85e-07,309;UBERON:0006947,9.49e-07,3;UBERON:0004054,9.49e-07,3 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0.893922188854576,0.872338524100369,0,0,0.783556884599516,0,0,0.436882744260345,0.263766978228454,0.74259811776028,1.65698687863958,0,0,0,0,0.369363174230364,0,0.940364164434263,3.14859585844162,1.23186982565596,0.87879847716362,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.00267582127178,4.34539556882471,6.36228757640879,12.1658717575659,0.378139268656271,0.221729397462564,0.43917392846563,1.5062593682237,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0.775250277507987,0.35576626268671,0.66944122552934,0.402829317109147,0,0.24406205754817,0,0,0,0.898117490504679,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,1.72101972449288,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0.600182192168805,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0.504867548488229,0,1.13152239773168,1.06502877754984,0,0,0,0,0,0.487894824518382,0.397589304964456,0.348581828608555,0.310983165046111,0,0.72995471815166,0,0,0,0,0,0.946454400318751,0.337169380156203,0,0.661763836394364,0.217879444092406,0,0.539325232640658,0,0.38474715694639,0,0,0,0,26.6185573125845,6.87979051674338,3.54473944008842,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0.927443239800615,0.234817388471643,0,0.462985512576611,1.33177906564219,3.1608175918371,1.71697232418975,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,1.40877494421162,0.207328115540772,0.288239906833923,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0.502257091432126,0,0,3.44585807502342,0,0.144781306667579,0,0,0.224170287987055,0,0,0,1.27047312111232,0,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,0.736148950314839,1.50051156317903,0.813795071099207,0,0.178428988797162,0.157702415033935,0.35142424497814,0.300946099727719,0,0,0,0,0.173767228936166,0,1.37257369524342,0,0,0.106727557803444,0,1.66435439510497,0,0.248107807818777,0.153461973288062,0.561320188866147,0.128139149255701,0,0.804269605718038,1.48418066444991,0.462629081407967,1.24293207719189,0.410635780069046,0,0.813472649219715,0.120859449591622,0,0,0.114814448164607,0.546273504020151,1.57349297951309,0,0,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.512900250232778,0,0,2.26690225624989,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0.290033387828457,0,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0.767693373934002,0.855877976067841,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0.409499734223957,0,0,0,0,0.876901770507525,0.578775534266688,1.31178950409327,0,0,0,0,0,0,0,8.2331977766089,1.97576935775941,0.379473173765715,1.04980416073495,0,0,0,1.88287601553558,0,0,0,0,0,1.52927441428475,1.13929437434833,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,2.62618933211459,8.31501106331388,1.53580351049616,3.97659059106519,3.37606599385231,0.222617410045812,1.81284261649436,0,4.18420775327246,1.65770349318689,1.0077309914171,0.306806047506464,0,0,0,0.179021174675609,0,1.97286811273867,0,0,3.87733098438087,8.07082454008106,0,0.260427761085233,0.174919999992391,0,0,0,0.472775363535873,0,0,0.173624994933292,0,3.61789315876224,1.52581736317083,1.87984741883082,3.25102380848902,4.38770794307945,0,0,1.00035336054936,0.569710279235006,0,0.0897576444097721,0,0.638002319463839,0.274792780205587,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0.530745387020035,0,0,0,0,1.48282492557489,0.802577647298789,3.74823113160543,0,0.19566461893209,0,6.31335044559025,2.41981432097328,1.83643656978294,1.95878396848313,0,0.311064574191741,0,0,0,0,0.569219092059585,0,0.173559738335131,0.0979923974143777,0.0870592065804026,11.1825067674899,0.171986032471617,1.64485763191445,0.65780385377567,0.821154570532092,0.678923115418936,0.353024506766001,4.97157629717171,0.137041924646751,0.19871461170299,1.96263467463224,0.195551382734803,0,4.26905989478705,0,0,0,0,0.14405479798815,0,0.235694034616795,0.543616824294456,0.836822770498666,0,0.577901179803038,1.80126086612937,1.36905378891993,0,0.429765441419957,0,6.14421282798959,0.687481272035051,0.717873024576814,0.199679000498991,1.28767814440971,0.446342914883745,0.0671834724867263,0,0,0.315132729228895,0.494495150286999,0.13480708770837,0.78741985211799,0,2.38568906942791,3.54128855890097,0,0.275078873194468,3.73896304226267,0,0,2.00473536971481,0.335434687599266,2.20655980437755,0.0524545881349981,0,2.51002275065983,0,0.714695326373367,0,0,6.51599522104455,2.5926644736038,2.28611152076586,0,0,0,0.113312091520126,4.9827759450548,1.32506888912221,2.32709321450791,5.15707146796491,0.171086837884329,0.704815022316672,0.747511887973863,0,0.828478110694391,0.992332043623902,0,0,0,0,0.2506898940227,0.306345576763462,0,0.471162288750703,0.886068179966986,17.0836770862748,2.253436752717,4.58727356552057,4.21530395840039,2.73224172942087,0,0,0,0,0.705797459094515,0,0,0.447764408660622,0,0.554805861502613,0,0.50313580350515,0,0.228840068396924,0.907385542579434,0.15543720058278,0,0.159296767163702,0,0.155262956876259,1.65882483136342,0.265841714557995,0,0.751288044986092,0.380805212168795,0,0,0,0,0,0,1.37358282073117,1.34699795506368,0,0.192619830407303,0,0.260994291965212,0,0.231522474323834,0,0.179088841081487,1.54400723580486,0,0,0.38582807654183,0,0.256241518587947,0,0,1.7973596699725,0,0.132864840313363,0,0.655219697692825,1.72041036127604,0,0.19998739585493,0.106691729694141,0,0,0.368211900503681,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,1.05802783107205,1.2249819094128,1.41304295212211,2.8339315265117,2.71377560397157,2.46139637088906,0.252071696221718,2.62797559364028,6.13607453401034,0,0.196295437002051,0.235939446695481,0.366857197043358,0,0,0,0,0.82731361184183,0,0.781514011233092,0,0,0,1.2156765231311,3.90539049306924,4.96048311602842,1.96589011601111,0,0.548257766857182,6.94695649745012,0,0,1.60710550763486,1.3451348888753,0.606965604236632,0,0,0,0.857440047187092,1.69924332442079,2.10472875401117,0.236387681767936,0,1.56986185701028,2.04250266890802,0,0,0.215927591218621,0.47775168788705,2.71610867871294,0,0.464965701472501,0,0.801711364730253,0,0.3414369541879,0.691259661814092,0,0,0,34.7177381156562,0.68732060563215,0,0,0.111855431797792,0.098150233615243,0.243835849964539,0,0.205325613712494,1.1598144313382,0.485710993059139,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.655678681511872,0,2.94177986104687,0,7.85233868459781,2.97046400327086,4.226557275834,0,0.375935671919414,0.0644578879735772,0,0.178553938605658,0,0,0,0.458729283404541,3.15347082933193,0.157771562193185,2.99162556840025,1.30905207102113,3.7031878836078,8.55588541783528,7.85698568673411,3.02838593486652,0.126166424835079,0.218531143927391,0,0,0,0.0918948995348449,0,4.69827928953084,4.28742608249886,1.65833887891756,2.48239190068549,0.639701945702943,0.23806443146374,0.193766729508018,0,0.224263725161227,2.48223917284843,0.606351566874658,0.653150243690884,0.684466602170562,0.5388164241167,0.645499848534087,0.665320713092027,0,0,0,0.0898252021065869,0,0.733448665097199,0,3.32878387092756,1.20764276154616,0 | |||
|short_description=p@chr8:27457336..27457372,- | |||
}} |
Latest revision as of 17:34, 31 July 2015
Short description: | p@chr8:27457336..27457372, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:27457336..27457372, - |
Coexpression cluster: | C355_Chondrocyte_Hepatocyte_spinal_medulla_cerebral_seminal_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.39e-08 | 9 |
carbohydrate secreting cell | 1.39e-08 | 9 |
chondroblast | 5.24e-07 | 6 |
chondrocyte | 5.24e-07 | 6 |