FFCP PHASE1:Hg19::chr8:25337491..25337504,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:25337491..25337504,+ | |||
|description=CAGE_peak_at_chr8:25337491..25337504,+ | |description=CAGE_peak_at_chr8:25337491..25337504,+ | ||
|id=chr8:25337491..25337504,+ | |id=chr8:25337491..25337504,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.36e-08!180;CL:0000057!1.03e-07!75;CL:0000499!2.03e-07!27 | |ontology_enrichment_celltype=CL:0000055!5.36e-08!180;CL:0000057!1.03e-07!75;CL:0000499!2.03e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002602;1.95e-27;2!CL:0000342;8.74e-15;1!CL:0002565;8.74e-15;1!CL:0000153;7.20e-07;9!CL:0000447;7.20e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,2.09e-27,2;CL:0000342,8.17e-15,1;CL:0002565,8.17e-15,1;CL:0000153,8.10e-07,9;CL:0000447,8.10e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0010226;6.65e-15;1!UBERON:0004140;1.84e-14;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004905!9.07e-07!5;UBERON:0000982!9.07e-07!5;UBERON:0004770!9.07e-07!5 | |ontology_enrichment_uberon=UBERON:0004905!9.07e-07!5;UBERON:0000982!9.07e-07!5;UBERON:0004770!9.07e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0006444;1.95e-27;2!UBERON:0001995;1.95e-27;2!UBERON:0004715;1.95e-27;2!UBERON:0004905;7.51e-27;8!UBERON:0000982;7.51e-27;8!UBERON:0004770;7.51e-27;8!UBERON:0011135;2.37e-24;5!UBERON:0002216;2.37e-24;5!UBERON:0011134;2.37e-24;5!UBERON:0002209;2.37e-24;5!UBERON:0002213;2.37e-24;5!UBERON:0007844;2.37e-24;5!UBERON:0011138;2.37e-24;5!UBERON:0001130;2.37e-24;5!UBERON:0001066;2.37e-24;5!UBERON:0001468;2.37e-24;5!UBERON:0002418;1.19e-18;3!UBERON:0004755;1.19e-18;3!UBERON:0002084;6.65e-15;1!UBERON:0002082;6.65e-15;1!UBERON:0002506;8.74e-15;1!UBERON:0001769;8.74e-15;1!UBERON:0007195;1.84e-14;1!UBERON:0004765;9.27e-13;26!UBERON:0001434;1.35e-08;36!UBERON:0000075;5.00e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,2.09e-27,2;UBERON:0001995,2.09e-27,2;UBERON:0004715,2.09e-27,2;UBERON:0004905,9.50e-27,8;UBERON:0000982,9.50e-27,8;UBERON:0004770,9.50e-27,8;UBERON:0011135,3.13e-24,5;UBERON:0002216,3.13e-24,5;UBERON:0011134,3.13e-24,5;UBERON:0002209,3.13e-24,5;UBERON:0002213,3.13e-24,5;UBERON:0005856,3.13e-24,5;UBERON:0005866,3.13e-24,5;UBERON:0005863,3.13e-24,5;UBERON:0007844,3.13e-24,5;UBERON:0011138,3.13e-24,5;UBERON:0001130,3.13e-24,5;UBERON:0001066,3.13e-24,5;UBERON:0001468,3.13e-24,5;UBERON:0002418,1.24e-18,3;UBERON:0004755,1.24e-18,3;UBERON:0002084,7.13e-15,1;UBERON:0002082,7.13e-15,1;UBERON:0010226,7.13e-15,1;UBERON:0002506,8.17e-15,1;UBERON:0001769,8.17e-15,1;UBERON:0007195,2.41e-14,1;UBERON:0000075,5.44e-08,16 | |||
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| ||
|short_description=p@chr8:25337491..25337504,+ | |short_description=p@chr8:25337491..25337504,+ | ||
}} | }} |
Latest revision as of 17:22, 31 July 2015
Short description: | p@chr8:25337491..25337504, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:25337491..25337504, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 2.09e-27 | 2 |
pigment cell (sensu Vertebrata) | 8.17e-15 | 1 |
iris pigment epithelial cell | 8.17e-15 | 1 |
GAG secreting cell | 8.10e-07 | 9 |
carbohydrate secreting cell | 8.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 2.09e-27 | 2 |
fibrocartilage | 2.09e-27 | 2 |
annulus fibrosus disci intervertebralis | 2.09e-27 | 2 |
articulation | 9.50e-27 | 8 |
skeletal joint | 9.50e-27 | 8 |
articular system | 9.50e-27 | 8 |
intervertebral cartilage | 3.13e-24 | 5 |
symphysis | 3.13e-24 | 5 |
nonsynovial joint | 3.13e-24 | 5 |
fibrous joint | 3.13e-24 | 5 |
cartilaginous joint | 3.13e-24 | 5 |
developing mesenchymal condensation | 3.13e-24 | 5 |
pre-cartilage condensation | 3.13e-24 | 5 |
cartilaginous condensation | 3.13e-24 | 5 |
cartilage element | 3.13e-24 | 5 |
post-cranial axial skeletal system | 3.13e-24 | 5 |
vertebral column | 3.13e-24 | 5 |
intervertebral disk | 3.13e-24 | 5 |
intervertebral joint | 3.13e-24 | 5 |
cartilage tissue | 1.24e-18 | 3 |
skeletal tissue | 1.24e-18 | 3 |
heart left ventricle | 7.13e-15 | 1 |
cardiac ventricle | 7.13e-15 | 1 |
future cardiac ventricle | 7.13e-15 | 1 |
iris epithelium | 8.17e-15 | 1 |
iris | 8.17e-15 | 1 |
stroma of bone marrow | 2.41e-14 | 1 |
subdivision of skeletal system | 5.44e-08 | 16 |