FFCP PHASE1:Hg19::chr8:22034506..22034518,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:22034506..22034518,+ | |||
|description=CAGE_peak_at_chr8:22034506..22034518,+ | |||
|id=chr8:22034506..22034518,+ | |||
|ontology_enrichment_celltype=CL:0000349!5.51e-13!3;CL:0002577!5.51e-13!3;CL:1000306!1.08e-08!4;CL:0002547!1.08e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.22e-44;3!CL:0000322;2.07e-12;3!CL:0000349;5.94e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.22e-44,3;CL:0000322,2.07e-12,3;CL:0000349,5.94e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.84e-34;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;6.48e-18;2!DOID:3908;5.73e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,6.48e-18,2;DOID:3908,5.73e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001987!8.44e-17!4;UBERON:0004340!8.44e-17!4;UBERON:0005631!9.38e-17!14;UBERON:0000158!9.38e-17!14;UBERON:0003124!4.61e-14!7;UBERON:0000478!1.18e-11!24;UBERON:0000415!1.08e-08!4;UBERON:0007240!1.08e-08!4;UBERON:0005742!1.08e-08!4;UBERON:0005734!1.08e-08!4;UBERON:0004664!1.08e-08!4;UBERON:0004663!1.08e-08!4;UBERON:0000473!1.26e-07!8;UBERON:0004923!4.65e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.01e-74;4!UBERON:0004903;6.48e-18;2!UBERON:0002173;6.48e-18;2!UBERON:0002186;6.48e-18;2!UBERON:0000478;3.48e-13;24!UBERON:0004821;2.07e-12;3!UBERON:0007499;2.07e-12;3!UBERON:0003215;2.07e-12;3!UBERON:0010368;2.07e-12;3!UBERON:0009911;2.07e-12;3!UBERON:0002299;2.07e-12;3!UBERON:0006524;2.07e-12;3!UBERON:0008874;2.07e-12;3!UBERON:0002169;2.07e-12;3!UBERON:0004894;2.07e-12;3!UBERON:0000077;8.31e-12;27!UBERON:0009856;1.22e-09;4!UBERON:0000474;4.87e-08;37!UBERON:0003100;2.11e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,2.01e-74,4;UBERON:0004340,2.01e-74,4;UBERON:0003124,5.22e-43,7;UBERON:0005631,5.39e-22,14;UBERON:0000158,5.39e-22,14;UBERON:0004903,6.48e-18,2;UBERON:0002173,6.48e-18,2;UBERON:0002186,6.48e-18,2;UBERON:0000995,5.94e-15,21;UBERON:0005795,2.61e-14,22;UBERON:0003975,2.61e-14,22;UBERON:0000478,3.48e-13,24;UBERON:0004175,1.09e-12,25;UBERON:0004821,2.07e-12,3;UBERON:0003215,2.07e-12,3;UBERON:0010368,2.07e-12,3;UBERON:0009911,2.07e-12,3;UBERON:0002299,2.07e-12,3;UBERON:0006524,2.07e-12,3;UBERON:0008874,2.07e-12,3;UBERON:0002169,2.07e-12,3;UBERON:0004894,2.07e-12,3;UBERON:0000077,4.80e-11,29;UBERON:0003134,8.17e-09,37;UBERON:0000474,8.17e-09,37;UBERON:0003100,5.06e-08,41;UBERON:0006554,4.40e-07,47;UBERON:0003133,6.00e-07,48;UBERON:0001008,6.00e-07,48 | |||
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| ||
|short_description=p@chr8:22034506..22034518,+ | |||
}} | }} |
Latest revision as of 16:51, 31 July 2015
Short description: | p@chr8:22034506..22034518, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:22034506..22034518, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.22e-44 | 3 |
pneumocyte | 2.07e-12 | 3 |
extraembryonic cell | 5.94e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
placenta | 2.01e-74 | 4 |
allantois | 2.01e-74 | 4 |
chorion | 5.22e-43 | 7 |
extraembryonic membrane | 5.39e-22 | 14 |
membranous layer | 5.39e-22 | 14 |
bronchoalveolar duct junction | 6.48e-18 | 2 |
alveolar duct | 6.48e-18 | 2 |
bronchiole | 6.48e-18 | 2 |
uterus | 5.94e-15 | 21 |
embryonic uterus | 2.61e-14 | 22 |
internal female genitalia | 2.61e-14 | 22 |
extraembryonic structure | 3.48e-13 | 24 |
internal genitalia | 1.09e-12 | 25 |
pulmonary alveolus epithelium | 2.07e-12 | 3 |
alveolus | 2.07e-12 | 3 |
pulmonary lobule | 2.07e-12 | 3 |
lobule | 2.07e-12 | 3 |
alveolus of lung | 2.07e-12 | 3 |
alveolar system | 2.07e-12 | 3 |
pulmonary acinus | 2.07e-12 | 3 |
alveolar sac | 2.07e-12 | 3 |
alveolar wall | 2.07e-12 | 3 |
mixed endoderm/mesoderm-derived structure | 4.80e-11 | 29 |
female reproductive organ | 8.17e-09 | 37 |
female reproductive system | 8.17e-09 | 37 |
female organism | 5.06e-08 | 41 |
urinary system structure | 4.40e-07 | 47 |
reproductive organ | 6.00e-07 | 48 |
renal system | 6.00e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 6.48e-18 | 2 |
non-small cell lung carcinoma | 5.73e-08 | 5 |