FFCP PHASE1:Hg19::chr8:16609920..16609923,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:16609920..16609923,+ | |||
|description=CAGE_peak_at_chr8:16609920..16609923,+ | |||
|id=chr8:16609920..16609923,+ | |||
|ontology_enrichment_celltype=CL:0000569!2.64e-12!4;CL:0000011!2.64e-12!4;CL:0002504!4.38e-10!3;CL:1000279!4.38e-10!3;CL:1000280!4.38e-10!3;CL:0002097!1.99e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002573;3.10e-30;2!CL:0000222;1.67e-23;1!CL:0000319;4.10e-23;1!CL:0000054;2.90e-12;2!CL:0000159;2.90e-12;2!CL:0002097;2.90e-12;2!CL:0000137;2.90e-12;2!CL:0000092;2.90e-12;2!CL:0000174;1.30e-08;3!CL:1000306;6.50e-07;4!CL:0002547;6.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,2.67e-30,2;CL:0000319,6.40e-23,1;CL:0000054,2.59e-12,2;CL:0000137,2.59e-12,2;CL:0000092,2.59e-12,2;CL:0002097,2.90e-12,2;CL:0000159,3.62e-12,2;CL:0000174,1.30e-08,3;CL:1000306,6.50e-07,4;CL:0002547,6.50e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;4.10e-23;1!DOID:3165;4.10e-23;1!DOID:0060121;4.10e-23;1!DOID:2438;4.10e-23;1!DOID:3030;4.10e-23;1!DOID:4418;4.10e-23;1!DOID:154;2.90e-12;2!DOID:200;2.90e-12;2!DOID:4236;2.90e-12;2!DOID:4305;2.90e-12;2!DOID:0060072;9.10e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.28e-23,1;DOID:3165,3.28e-23,1;DOID:0060121,3.28e-23,1;DOID:2438,3.28e-23,1;DOID:4418,3.28e-23,1;DOID:3030,6.40e-23,1;DOID:200,2.59e-12,2;DOID:4305,2.59e-12,2;DOID:154,3.24e-12,2;DOID:4236,3.24e-12,2;DOID:0060072,8.61e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000010;8.79e-11;8!UBERON:0002369;1.30e-08;3!UBERON:0001235;1.30e-08;3!UBERON:0006858;1.30e-08;3!UBERON:0004797;6.50e-07;4!UBERON:0000415;6.50e-07;4!UBERON:0007240;6.50e-07;4!UBERON:0005742;6.50e-07;4!UBERON:0005734;6.50e-07;4!UBERON:0004664;6.50e-07;4!UBERON:0004663;6.50e-07;4!UBERON:0000014;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,8.37e-11,8;UBERON:0002369,1.30e-08,3;UBERON:0001235,1.30e-08,3;UBERON:0006858,1.30e-08,3;UBERON:0000415,6.50e-07,4;UBERON:0007240,6.50e-07,4;UBERON:0005742,6.50e-07,4;UBERON:0005734,6.50e-07,4;UBERON:0004664,6.50e-07,4;UBERON:0004663,6.50e-07,4;UBERON:0000014,8.61e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535798369704479,0.22452937262617,0,0,0,0,0,0,0,0,0,4.10468460520978,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0.245668634623536,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616194468458578,0,0,0.322260734604821,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.38126038784765,0,0,0,0,0.359744915166629,0.823611089208164,0.942499218765491,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,1.39100228192093,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.313808538937,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89659637035217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.298509605773748,0,0.554805861502613,0,0,0,0.686520205190771,0.604923695052956,0.15543720058278,0.443565449968902,0,0,0,0.414706207840855,0.53168342911599,0,0,0,0,0,0,0,0.796191777397232,0,0,0,2.52369796457302,1.34833881285112,0.643324774124777,0,0,0.231522474323834,0.244736704506468,0,0,0.438568099157414,0,0,0,0,0,0.911579868532147,0,0,0,0,1.31043939538565,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0.697448552208751,0,0,0,0,0,0,1.77498001095848,2.47118873801557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:16609920..16609923,+ | |||
}} |
Latest revision as of 16:20, 31 July 2015
Short description: | p@chr8:16609920..16609923, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:16609920..16609923, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 2.67e-30 | 2 |
mucus secreting cell | 6.40e-23 | 1 |
bone matrix secreting cell | 2.59e-12 | 2 |
osteocyte | 2.59e-12 | 2 |
osteoclast | 2.59e-12 | 2 |
cortical cell of adrenal gland | 2.90e-12 | 2 |
seromucus secreting cell | 3.62e-12 | 2 |
steroid hormone secreting cell | 1.30e-08 | 3 |
fibroblast of tunica adventitia of artery | 6.50e-07 | 4 |
fibroblast of the aortic adventitia | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 8.37e-11 | 8 |
adrenal gland | 1.30e-08 | 3 |
adrenal cortex | 1.30e-08 | 3 |
adrenal/interrenal gland | 1.30e-08 | 3 |
artery wall | 6.50e-07 | 4 |
tunica adventitia of artery | 6.50e-07 | 4 |
adventitia | 6.50e-07 | 4 |
tunica adventitia of blood vessel | 6.50e-07 | 4 |
aorta tunica adventitia | 6.50e-07 | 4 |
aorta wall | 6.50e-07 | 4 |
zone of skin | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.28e-23 | 1 |
skin benign neoplasm | 3.28e-23 | 1 |
integumentary system benign neoplasm | 3.28e-23 | 1 |
dermis tumor | 3.28e-23 | 1 |
cutaneous fibrous histiocytoma | 3.28e-23 | 1 |
mucinous adenocarcinoma | 6.40e-23 | 1 |
giant cell tumor | 2.59e-12 | 2 |
bone giant cell tumor | 2.59e-12 | 2 |
mixed cell type cancer | 3.24e-12 | 2 |
carcinosarcoma | 3.24e-12 | 2 |
benign neoplasm | 8.61e-07 | 4 |