FFCP PHASE1:Hg19::chr8:134696346..134696360,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:134696346..134696360,- | |||
|coexpression_cluster_id=C4730 | |coexpression_cluster_id=C4730 | ||
|description=CAGE_peak_at_chr8:134696346..134696360,- | |description=CAGE_peak_at_chr8:134696346..134696360,- | ||
|id=chr8:134696346..134696360,- | |id=chr8:134696346..134696360,- | ||
|ontology_enrichment_celltype=CL:0000349!1.24e-14!3;CL:0002577!1.24e-14!3;CL:0002536!2.53e-10!2;CL:0000080!1.55e-07!6 | |ontology_enrichment_celltype=CL:0000349!1.24e-14!3;CL:0002577!1.24e-14!3;CL:0002536!2.53e-10!2;CL:0000080!1.55e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002577;3.94e-43;3!CL:0002536;2.96e-29;2!CL:0000349;1.06e-18;19!CL:0000084;2.03e-09;25!CL:0002097;2.87e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,4.55e-43,3;CL:0002536,2.56e-29,2;CL:0000349,1.06e-18,19;CL:0000084,2.03e-09,25;CL:0000827,2.03e-09,25;CL:0002097,2.87e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1287!3.10e-10!4;DOID:114!1.69e-09!2;DOID:0060058!1.71e-07!10 | |ontology_enrichment_disease=DOID:1287!3.10e-10!4;DOID:114!1.69e-09!2;DOID:0060058!1.71e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.16e-15;1!DOID:0060061;1.16e-15;1!DOID:8691;1.16e-15;1!DOID:0060058;1.71e-13;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.16e-15,1;DOID:0060061,1.16e-15,1;DOID:8691,1.16e-15,1;DOID:0060058,1.67e-13,10 | |||
|ontology_enrichment_uberon=UBERON:0000478!3.61e-17!24;UBERON:0005631!3.06e-11!14;UBERON:0000158!3.06e-11!14;UBERON:0001987!4.37e-11!4;UBERON:0004340!4.37e-11!4;UBERON:0002331!1.71e-07!10;UBERON:0000358!1.71e-07!10;UBERON:0000307!1.71e-07!10;UBERON:0000091!1.71e-07!10;UBERON:0000087!1.71e-07!10;UBERON:0007806!1.71e-07!10;UBERON:0008780!1.71e-07!10;UBERON:0005728!1.71e-07!10 | |ontology_enrichment_uberon=UBERON:0000478!3.61e-17!24;UBERON:0005631!3.06e-11!14;UBERON:0000158!3.06e-11!14;UBERON:0001987!4.37e-11!4;UBERON:0004340!4.37e-11!4;UBERON:0002331!1.71e-07!10;UBERON:0000358!1.71e-07!10;UBERON:0000307!1.71e-07!10;UBERON:0000091!1.71e-07!10;UBERON:0000087!1.71e-07!10;UBERON:0007806!1.71e-07!10;UBERON:0008780!1.71e-07!10;UBERON:0005728!1.71e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.20e-37;24!UBERON:0001987;1.47e-32;4!UBERON:0002331;1.79e-13;10!UBERON:0000178;3.54e-09;15!UBERON:0000179;3.54e-09;15!UBERON:0000463;3.54e-09;15!UBERON:0000305;4.57e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,4.30e-37,24;UBERON:0001987,1.64e-32,4;UBERON:0004340,1.64e-32,4;UBERON:0005631,2.43e-25,14;UBERON:0000158,2.43e-25,14;UBERON:0003124,6.70e-19,7;UBERON:0002331,1.82e-13,10;UBERON:0000358,1.82e-13,10;UBERON:0000307,1.82e-13,10;UBERON:0000091,1.82e-13,10;UBERON:0000087,1.82e-13,10;UBERON:0007010,1.82e-13,10;UBERON:0007806,1.82e-13,10;UBERON:0008780,1.82e-13,10;UBERON:0005728,1.82e-13,10;UBERON:0000178,3.59e-09,15;UBERON:0000179,3.59e-09,15;UBERON:0000463,3.59e-09,15;UBERON:0000305,4.39e-09,7;UBERON:0004871,4.66e-08,8 | |||
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| ||
|short_description=p@chr8:134696346..134696360,- | |short_description=p@chr8:134696346..134696360,- | ||
}} | }} |
Latest revision as of 15:28, 31 July 2015
Short description: | p@chr8:134696346..134696360, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:134696346..134696360, - |
Coexpression cluster: | C4730_Placental_adult_Amniotic_cord_mycosis_hepatoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 4.55e-43 | 3 |
amniotic epithelial cell | 2.56e-29 | 2 |
extraembryonic cell | 1.06e-18 | 19 |
T cell | 2.03e-09 | 25 |
pro-T cell | 2.03e-09 | 25 |
cortical cell of adrenal gland | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 4.30e-37 | 24 |
placenta | 1.64e-32 | 4 |
allantois | 1.64e-32 | 4 |
extraembryonic membrane | 2.43e-25 | 14 |
membranous layer | 2.43e-25 | 14 |
chorion | 6.70e-19 | 7 |
umbilical cord | 1.82e-13 | 10 |
blastocyst | 1.82e-13 | 10 |
blastula | 1.82e-13 | 10 |
bilaminar disc | 1.82e-13 | 10 |
inner cell mass | 1.82e-13 | 10 |
cleaving embryo | 1.82e-13 | 10 |
connecting stalk | 1.82e-13 | 10 |
inner cell mass derived epiblast | 1.82e-13 | 10 |
extraembryonic mesoderm | 1.82e-13 | 10 |
blood | 3.59e-09 | 15 |
haemolymphatic fluid | 3.59e-09 | 15 |
organism substance | 3.59e-09 | 15 |
amnion | 4.39e-09 | 7 |
somatic layer of lateral plate mesoderm | 4.66e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.16e-15 | 1 |
cutaneous T cell lymphoma | 1.16e-15 | 1 |
mycosis fungoides | 1.16e-15 | 1 |
lymphoma | 1.67e-13 | 10 |