FFCP PHASE1:Hg19::chr8:128306960..128306989,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:128306960..128306989,- | |||
|coexpression_cluster_id=C4726 | |coexpression_cluster_id=C4726 | ||
|description=CAGE_peak_at_chr8:128306960..128306989,- | |description=CAGE_peak_at_chr8:128306960..128306989,- | ||
|id=chr8:128306960..128306989,- | |id=chr8:128306960..128306989,- | ||
|ontology_enrichment_celltype=CL:0000066!8.75e-48!254;CL:0000220!1.12e-27!246;CL:0002321!5.49e-27!248;CL:0002076!2.99e-20!43;CL:0000548!3.28e-16!679;CL:0000004!3.28e-16!679;CL:0000255!3.28e-16!679;CL:0000012!1.12e-15!682;CL:0000222!2.04e-15!119;CL:0000223!3.83e-15!59;CL:0000076!5.95e-14!62;CL:0000680!4.74e-11!57;CL:0000056!4.74e-11!57;CL:0000355!4.74e-11!57;CL:0000183!1.19e-10!59;CL:0000187!2.96e-10!54;CL:0000192!6.36e-10!42;CL:0000514!6.36e-10!42;CL:0000003!1.66e-09!722;CL:0002251!5.26e-09!21;CL:0000393!8.91e-09!60;CL:0000211!8.91e-09!60;CL:0002139!1.30e-08!24;CL:0000359!2.68e-08!32;CL:0002368!1.33e-07!13;CL:1000497!2.26e-07!18;CL:0002518!2.26e-07!18;CL:1000449!3.77e-07!16;CL:0000115!4.36e-07!35;CL:0000071!7.69e-07!18;CL:0002546!7.69e-07!18;CL:1000507!8.61e-07!12;CL:1000494!8.61e-07!12 | |ontology_enrichment_celltype=CL:0000066!8.75e-48!254;CL:0000220!1.12e-27!246;CL:0002321!5.49e-27!248;CL:0002076!2.99e-20!43;CL:0000548!3.28e-16!679;CL:0000004!3.28e-16!679;CL:0000255!3.28e-16!679;CL:0000012!1.12e-15!682;CL:0000222!2.04e-15!119;CL:0000223!3.83e-15!59;CL:0000076!5.95e-14!62;CL:0000680!4.74e-11!57;CL:0000056!4.74e-11!57;CL:0000355!4.74e-11!57;CL:0000183!1.19e-10!59;CL:0000187!2.96e-10!54;CL:0000192!6.36e-10!42;CL:0000514!6.36e-10!42;CL:0000003!1.66e-09!722;CL:0002251!5.26e-09!21;CL:0000393!8.91e-09!60;CL:0000211!8.91e-09!60;CL:0002139!1.30e-08!24;CL:0000359!2.68e-08!32;CL:0002368!1.33e-07!13;CL:1000497!2.26e-07!18;CL:0002518!2.26e-07!18;CL:1000449!3.77e-07!16;CL:0000115!4.36e-07!35;CL:0000071!7.69e-07!18;CL:0002546!7.69e-07!18;CL:1000507!8.61e-07!12;CL:1000494!8.61e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.88e-14;42!CL:0002202;6.29e-09;9!CL:0002632;6.29e-09;9!CL:0000076;3.71e-08;63!CL:0002368;4.41e-08;13!CL:0002251;6.13e-08;20!CL:0002149;1.42e-07;6!CL:0002255;1.42e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.17e-52,253;CL:0002321,1.51e-25,250;CL:0002076,1.20e-20,42;CL:0000223,1.18e-16,58;CL:0000076,1.90e-15,63;CL:0000222,5.20e-12,121;CL:0002202,8.99e-09,9;CL:0002632,8.99e-09,9;CL:0002251,3.65e-08,20;CL:0002368,6.69e-08,13;CL:0002149,1.05e-07,6;CL:0002255,1.05e-07,6;CL:0000680,1.23e-07,58;CL:0000056,1.23e-07,58;CL:0000355,1.23e-07,58;CL:0000187,3.85e-07,55;CL:0002139,6.46e-07,24;CL:0000192,6.77e-07,43;CL:0000514,6.77e-07,43;CL:0000115,9.48e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000223;9.30e-09;58 | |||
|ontology_enrichment_disease=DOID:305!3.62e-18!106;DOID:0050687!2.82e-11!143;DOID:1749!3.68e-10!14;DOID:299!5.72e-10!25 | |ontology_enrichment_disease=DOID:305!3.62e-18!106;DOID:0050687!2.82e-11!143;DOID:1749!3.68e-10!14;DOID:299!5.72e-10!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.28e-13;14!DOID:299;7.12e-12;25!DOID:3001;1.42e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.79e-22,106;DOID:0050687,3.07e-14,143;DOID:1749,8.16e-14,14;DOID:299,5.87e-12,25;DOID:3001,1.05e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.47e-18!238;UBERON:0009142!1.47e-18!238;UBERON:0000481!1.04e-14!347;UBERON:0000490!1.04e-14!138;UBERON:0000119!9.28e-14!312;UBERON:0002049!1.96e-13!79;UBERON:0007798!1.96e-13!79;UBERON:0000483!5.22e-13!309;UBERON:0004119!5.35e-13!169;UBERON:0000925!5.35e-13!169;UBERON:0006595!5.35e-13!169;UBERON:0002100!6.81e-13!216;UBERON:0003914!6.98e-13!118;UBERON:0000055!1.22e-12!69;UBERON:0000464!2.88e-12!104;UBERON:0001981!1.27e-11!60;UBERON:0007500!1.27e-11!60;UBERON:0004537!1.27e-11!60;UBERON:0006965!1.27e-11!60;UBERON:0001004!1.65e-11!72;UBERON:0001637!1.65e-11!42;UBERON:0003509!1.65e-11!42;UBERON:0004572!1.65e-11!42;UBERON:0000486!6.81e-11!82;UBERON:0000065!2.23e-10!53;UBERON:0000467!2.34e-10!625;UBERON:0000480!3.27e-10!626;UBERON:0000072!3.72e-10!46;UBERON:0008947!3.91e-10!38;UBERON:0003258!3.91e-10!38;UBERON:0005256!3.97e-10!143;UBERON:0000477!4.76e-10!286;UBERON:0000466!9.20e-10!126;UBERON:0004111!1.09e-09!241;UBERON:0001007!1.10e-09!155;UBERON:0001555!1.10e-09!155;UBERON:0007026!1.10e-09!155;UBERON:0000077!1.51e-09!130;UBERON:0004573!2.27e-09!33;UBERON:0004571!2.27e-09!33;UBERON:0001134!2.50e-09!61;UBERON:0002036!2.50e-09!61;UBERON:0003082!2.50e-09!61;UBERON:0000468!3.11e-09!659;UBERON:0000923!3.86e-09!604;UBERON:0005291!3.86e-09!604;UBERON:0006598!3.86e-09!604;UBERON:0002532!3.86e-09!604;UBERON:0000475!4.06e-09!365;UBERON:0004921!4.42e-09!129;UBERON:0004185!4.42e-09!129;UBERON:0000926!5.11e-09!448;UBERON:0004120!5.11e-09!448;UBERON:0006603!5.11e-09!448;UBERON:0002385!5.18e-09!63;UBERON:0001015!5.18e-09!63;UBERON:0000383!5.18e-09!63;UBERON:0002050!5.26e-09!605;UBERON:0005423!5.26e-09!605;UBERON:0001041!5.56e-09!98;UBERON:0004290!7.38e-09!70;UBERON:0004872!9.76e-09!84;UBERON:0007196!1.04e-08!14;UBERON:0001558!1.04e-08!14;UBERON:0005178!1.05e-08!34;UBERON:0002224!1.05e-08!34;UBERON:0000922!2.33e-08!612;UBERON:0005181!3.58e-08!35;UBERON:0000063!6.29e-08!97;UBERON:0000487!1.04e-07!22;UBERON:0000914!1.10e-07!83;UBERON:0002329!1.10e-07!83;UBERON:0003077!1.10e-07!83;UBERON:0003059!1.10e-07!83;UBERON:0007282!1.10e-07!83;UBERON:0009618!1.10e-07!83;UBERON:0007285!1.10e-07!83;UBERON:0000915!1.47e-07!52;UBERON:0001048!1.52e-07!168;UBERON:0004535!2.12e-07!110;UBERON:0004211!3.77e-07!16;UBERON:0001285!3.77e-07!16;UBERON:0007684!3.77e-07!16;UBERON:0003220!3.77e-07!16;UBERON:0004208!3.77e-07!16;UBERON:0000064!4.12e-07!219;UBERON:0001009!5.07e-07!113;UBERON:0001986!7.69e-07!18;UBERON:0004638!7.69e-07!18;UBERON:0004852!7.69e-07!18;UBERON:0009773!8.61e-07!12;UBERON:0001231!8.61e-07!12;UBERON:0004810!8.61e-07!12 | |ontology_enrichment_uberon=UBERON:0003104!1.47e-18!238;UBERON:0009142!1.47e-18!238;UBERON:0000481!1.04e-14!347;UBERON:0000490!1.04e-14!138;UBERON:0000119!9.28e-14!312;UBERON:0002049!1.96e-13!79;UBERON:0007798!1.96e-13!79;UBERON:0000483!5.22e-13!309;UBERON:0004119!5.35e-13!169;UBERON:0000925!5.35e-13!169;UBERON:0006595!5.35e-13!169;UBERON:0002100!6.81e-13!216;UBERON:0003914!6.98e-13!118;UBERON:0000055!1.22e-12!69;UBERON:0000464!2.88e-12!104;UBERON:0001981!1.27e-11!60;UBERON:0007500!1.27e-11!60;UBERON:0004537!1.27e-11!60;UBERON:0006965!1.27e-11!60;UBERON:0001004!1.65e-11!72;UBERON:0001637!1.65e-11!42;UBERON:0003509!1.65e-11!42;UBERON:0004572!1.65e-11!42;UBERON:0000486!6.81e-11!82;UBERON:0000065!2.23e-10!53;UBERON:0000467!2.34e-10!625;UBERON:0000480!3.27e-10!626;UBERON:0000072!3.72e-10!46;UBERON:0008947!3.91e-10!38;UBERON:0003258!3.91e-10!38;UBERON:0005256!3.97e-10!143;UBERON:0000477!4.76e-10!286;UBERON:0000466!9.20e-10!126;UBERON:0004111!1.09e-09!241;UBERON:0001007!1.10e-09!155;UBERON:0001555!1.10e-09!155;UBERON:0007026!1.10e-09!155;UBERON:0000077!1.51e-09!130;UBERON:0004573!2.27e-09!33;UBERON:0004571!2.27e-09!33;UBERON:0001134!2.50e-09!61;UBERON:0002036!2.50e-09!61;UBERON:0003082!2.50e-09!61;UBERON:0000468!3.11e-09!659;UBERON:0000923!3.86e-09!604;UBERON:0005291!3.86e-09!604;UBERON:0006598!3.86e-09!604;UBERON:0002532!3.86e-09!604;UBERON:0000475!4.06e-09!365;UBERON:0004921!4.42e-09!129;UBERON:0004185!4.42e-09!129;UBERON:0000926!5.11e-09!448;UBERON:0004120!5.11e-09!448;UBERON:0006603!5.11e-09!448;UBERON:0002385!5.18e-09!63;UBERON:0001015!5.18e-09!63;UBERON:0000383!5.18e-09!63;UBERON:0002050!5.26e-09!605;UBERON:0005423!5.26e-09!605;UBERON:0001041!5.56e-09!98;UBERON:0004290!7.38e-09!70;UBERON:0004872!9.76e-09!84;UBERON:0007196!1.04e-08!14;UBERON:0001558!1.04e-08!14;UBERON:0005178!1.05e-08!34;UBERON:0002224!1.05e-08!34;UBERON:0000922!2.33e-08!612;UBERON:0005181!3.58e-08!35;UBERON:0000063!6.29e-08!97;UBERON:0000487!1.04e-07!22;UBERON:0000914!1.10e-07!83;UBERON:0002329!1.10e-07!83;UBERON:0003077!1.10e-07!83;UBERON:0003059!1.10e-07!83;UBERON:0007282!1.10e-07!83;UBERON:0009618!1.10e-07!83;UBERON:0007285!1.10e-07!83;UBERON:0000915!1.47e-07!52;UBERON:0001048!1.52e-07!168;UBERON:0004535!2.12e-07!110;UBERON:0004211!3.77e-07!16;UBERON:0001285!3.77e-07!16;UBERON:0007684!3.77e-07!16;UBERON:0003220!3.77e-07!16;UBERON:0004208!3.77e-07!16;UBERON:0000064!4.12e-07!219;UBERON:0001009!5.07e-07!113;UBERON:0001986!7.69e-07!18;UBERON:0004638!7.69e-07!18;UBERON:0004852!7.69e-07!18;UBERON:0009773!8.61e-07!12;UBERON:0001231!8.61e-07!12;UBERON:0004810!8.61e-07!12 | ||
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| ||
|short_description=p@chr8:128306960..128306989,- | |short_description=p@chr8:128306960..128306989,- | ||
}} | }} |
Latest revision as of 14:53, 31 July 2015
Short description: | p@chr8:128306960..128306989, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:128306960..128306989, - |
Coexpression cluster: | C4726_clear_oral_giant_anaplastic_ductal_squamous_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.17e-52 | 253 |
embryonic cell | 1.51e-25 | 250 |
endo-epithelial cell | 1.20e-20 | 42 |
endodermal cell | 1.18e-16 | 58 |
squamous epithelial cell | 1.90e-15 | 63 |
mesodermal cell | 5.20e-12 | 121 |
epithelial cell of tracheobronchial tree | 8.99e-09 | 9 |
epithelial cell of lower respiratory tract | 8.99e-09 | 9 |
epithelial cell of alimentary canal | 3.65e-08 | 20 |
respiratory epithelial cell | 6.69e-08 | 13 |
epithelial cell of uterus | 1.05e-07 | 6 |
stromal cell of endometrium | 1.05e-07 | 6 |
muscle precursor cell | 1.23e-07 | 58 |
myoblast | 1.23e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-07 | 58 |
muscle cell | 3.85e-07 | 55 |
endothelial cell of vascular tree | 6.46e-07 | 24 |
smooth muscle cell | 6.77e-07 | 43 |
smooth muscle myoblast | 6.77e-07 | 43 |
endothelial cell | 9.48e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.79e-22 | 106 |
cell type cancer | 3.07e-14 | 143 |
squamous cell carcinoma | 8.16e-14 | 14 |
adenocarcinoma | 5.87e-12 | 25 |
female reproductive endometrioid cancer | 1.05e-07 | 6 |