FFCP PHASE1:Hg19::chr8:127445977..127445982,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:127445977..127445982,- | |||
|description=CAGE_peak_at_chr8:127445977..127445982,- | |||
|id=chr8:127445977..127445982,- | |||
|ontology_enrichment_celltype=CL:0002541!3.16e-13!3;CL:0000342!3.29e-10!1;CL:0002565!3.29e-10!1;CL:0000066!1.14e-08!254;CL:0002274!3.16e-08!5;CL:0000457!3.16e-08!5;CL:0002191!3.16e-08!5;CL:0000097!3.16e-08!5;CL:0000831!3.16e-08!5;CL:0002028!3.16e-08!5;CL:1000507!3.58e-07!12;CL:1000494!3.58e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002535;6.30e-26;2!CL:0000322;8.69e-18;3!CL:0002586;8.69e-18;3!CL:0000149;1.06e-13;4!CL:0000312;3.10e-11;5!CL:0000240;1.38e-09;6!CL:0000311;1.38e-09;6!CL:0000079;1.38e-09;6!CL:0000237;1.38e-09;6!CL:0002202;8.14e-07;9!CL:0000362;8.14e-07;9!CL:0002632;8.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.32e-26,2;CL:0000322,8.00e-18,3;CL:0002586,9.46e-18,3;CL:0000149,1.13e-13,4;CL:0000312,3.60e-11,5;CL:0000240,1.57e-09,6;CL:0000311,1.57e-09,6;CL:0000079,1.57e-09,6;CL:0000237,1.57e-09,6;CL:0000036,1.57e-09,6;CL:0000357,1.57e-09,6;CL:0000114,1.57e-09,6;CL:0002202,7.91e-07,9;CL:0002632,7.91e-07,9;CL:0000362,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.38e-09;6!CL:0000114;1.38e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!3.25e-16!14;DOID:3111!2.74e-10!1;DOID:3603!2.74e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:3910;6.30e-26;2!DOID:3908;3.10e-11;5!DOID:4362;3.10e-11;5!DOID:1325;2.11e-08;7!DOID:3904;2.11e-08;7!DOID:3905;8.14e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,5.56e-26,2;DOID:4362,2.66e-11,5;DOID:3908,2.94e-11,5;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000476!3.16e-13!3;UBERON:0000920!3.16e-13!3;UBERON:0000997!1.43e-10!1;UBERON:0005056!1.43e-10!1;UBERON:0002506!3.29e-10!1;UBERON:0001769!3.29e-10!1;UBERON:0009773!3.58e-07!12;UBERON:0001231!3.58e-07!12;UBERON:0004810!3.58e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.30e-26;2!UBERON:0006955;6.30e-26;2!UBERON:0004801;6.30e-26;2!UBERON:0002173;6.30e-26;2!UBERON:0002186;6.30e-26;2!UBERON:0004821;8.69e-18;3!UBERON:0007499;8.69e-18;3!UBERON:0001781;8.69e-18;3!UBERON:0003215;8.69e-18;3!UBERON:0010368;8.69e-18;3!UBERON:0009911;8.69e-18;3!UBERON:0002299;8.69e-18;3!UBERON:0001782;8.69e-18;3!UBERON:0006524;8.69e-18;3!UBERON:0008874;8.69e-18;3!UBERON:0002169;8.69e-18;3!UBERON:0004894;8.69e-18;3!UBERON:0009856;1.06e-13;4!UBERON:0000966;3.10e-11;5!UBERON:0005388;3.10e-11;5!UBERON:0001802;3.10e-11;5!UBERON:0000002;1.38e-09;6!UBERON:0001560;1.38e-09;6!UBERON:0010371;1.17e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.32e-26,2;UBERON:0004801,4.32e-26,2;UBERON:0004903,5.56e-26,2;UBERON:0002173,5.56e-26,2;UBERON:0002186,5.56e-26,2;UBERON:0004821,8.00e-18,3;UBERON:0003215,8.00e-18,3;UBERON:0010368,8.00e-18,3;UBERON:0009911,8.00e-18,3;UBERON:0002299,8.00e-18,3;UBERON:0006524,8.00e-18,3;UBERON:0008874,8.00e-18,3;UBERON:0002169,8.00e-18,3;UBERON:0004894,8.00e-18,3;UBERON:0001782,9.46e-18,3;UBERON:0005424,9.46e-18,3;UBERON:0001781,1.13e-13,4;UBERON:0000002,1.22e-09,6;UBERON:0001560,1.22e-09,6;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6 | |||
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|short_description=p@chr8:127445977..127445982,- | |||
}} | }} |
Latest revision as of 14:47, 31 July 2015
Short description: | p@chr8:127445977..127445982, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:127445977..127445982, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.32e-26 | 2 |
pneumocyte | 8.00e-18 | 3 |
retinal pigment epithelial cell | 9.46e-18 | 3 |
visual pigment cell | 1.13e-13 | 4 |
keratinocyte | 3.60e-11 | 5 |
stratified squamous epithelial cell | 1.57e-09 | 6 |
keratin accumulating cell | 1.57e-09 | 6 |
stratified epithelial cell | 1.57e-09 | 6 |
keratinizing barrier epithelial cell | 1.57e-09 | 6 |
epithelial fate stem cell | 1.57e-09 | 6 |
stratified epithelial stem cell | 1.57e-09 | 6 |
surface ectodermal cell | 1.57e-09 | 6 |
epithelial cell of tracheobronchial tree | 7.91e-07 | 9 |
epithelial cell of lower respiratory tract | 7.91e-07 | 9 |
epidermal cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.32e-26 | 2 |
cervix epithelium | 4.32e-26 | 2 |
bronchoalveolar duct junction | 5.56e-26 | 2 |
alveolar duct | 5.56e-26 | 2 |
bronchiole | 5.56e-26 | 2 |
pulmonary alveolus epithelium | 8.00e-18 | 3 |
alveolus | 8.00e-18 | 3 |
pulmonary lobule | 8.00e-18 | 3 |
lobule | 8.00e-18 | 3 |
alveolus of lung | 8.00e-18 | 3 |
alveolar system | 8.00e-18 | 3 |
pulmonary acinus | 8.00e-18 | 3 |
alveolar sac | 8.00e-18 | 3 |
alveolar wall | 8.00e-18 | 3 |
pigmented layer of retina | 9.46e-18 | 3 |
presumptive retinal pigmented epithelium | 9.46e-18 | 3 |
layer of retina | 1.13e-13 | 4 |
uterine cervix | 1.22e-09 | 6 |
neck of organ | 1.22e-09 | 6 |
retina | 1.44e-09 | 6 |
photoreceptor array | 1.44e-09 | 6 |
posterior segment of eyeball | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 5.56e-26 | 2 |
cervical cancer | 2.66e-11 | 5 |
non-small cell lung carcinoma | 2.94e-11 | 5 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |
lung carcinoma | 7.91e-07 | 9 |