FFCP PHASE1:Hg19::chr8:103834895..103834918,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:103834895..103834918,- | |||
|description=CAGE_peak_at_chr8:103834895..103834918,- | |description=CAGE_peak_at_chr8:103834895..103834918,- | ||
|id=chr8:103834895..103834918,- | |id=chr8:103834895..103834918,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.83e-09;39!CL:0000234;2.83e-09;39!CL:0000860;3.40e-08;33!CL:0002057;3.40e-08;33!CL:0000322;7.00e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.29e-09,48;CL:0000234,7.29e-09,48;CL:0002087,4.33e-07,115;CL:0000322,5.03e-07,3;CL:0000860,7.23e-07,42;CL:0002057,7.23e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.24e-30!235;DOID:14566!7.60e-29!239;DOID:0050686!3.67e-19!137;DOID:0050687!5.31e-16!143;DOID:305!2.74e-11!106;DOID:2531!1.30e-09!51;DOID:0060083!1.30e-09!51;DOID:1240!1.44e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:3910;6.28e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.79e-10,2;DOID:0050686,7.73e-09,137;DOID:162,1.06e-08,235;DOID:14566,2.18e-08,239 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.28e-10;2!UBERON:0002173;6.28e-10;2!UBERON:0002186;6.28e-10;2!UBERON:0004821;7.00e-07;3!UBERON:0007499;7.00e-07;3!UBERON:0003215;7.00e-07;3!UBERON:0010368;7.00e-07;3!UBERON:0009911;7.00e-07;3!UBERON:0002299;7.00e-07;3!UBERON:0006524;7.00e-07;3!UBERON:0008874;7.00e-07;3!UBERON:0002169;7.00e-07;3!UBERON:0004894;7.00e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.79e-10,2;UBERON:0002173,3.79e-10,2;UBERON:0002186,3.79e-10,2;UBERON:0004821,5.03e-07,3;UBERON:0003215,5.03e-07,3;UBERON:0010368,5.03e-07,3;UBERON:0009911,5.03e-07,3;UBERON:0002299,5.03e-07,3;UBERON:0006524,5.03e-07,3;UBERON:0008874,5.03e-07,3;UBERON:0002169,5.03e-07,3;UBERON:0004894,5.03e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0.0821005894499457,0.236132343941038,0,0.383829398097213,0,0,0,0,1.78174561334694,4.12290774213522,0,0,0.401088894940283,0.217010870715852,0.223915474239924,0,0,0.290796477559129,0.377875943688809,0.242584061187816,1.39457422143411,0.822335776043652,0,0.863077176966451,0.512321413058201,0.236482229888585,1.72372840368309,0,1.35426486594342,1.69418105588344,1.91034305040492,0,2.14258724659632,0.320929027076094,0,0,0.598390972864896,0.426224750532694,1.45104619314292,0.56738522469114,0.622822248995575,1.25624332628372,0.521482918420201,0.434377689410233,1.21079900526674,0.368277635987565,0,0.211255286311942,0.425208599930087,0,0,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0.560508562981536,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0.25618263945135,0.520237390239513,0.493313713811028,0,0,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0.443458794925128,0.175669571386252,0.196468613246569,0,0,0,0.522389211897802,0.26591592103773,0.715471872916026,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0.760272105718513,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0.622422070799533,0.134710672069688,0,0,0,0,0,0.570471821544449,0.149448680551801,0.23486899728753,0.161872944368132,0.561803226808994,0.61246251376468,0,0.206651562351531,0,0,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0.358779271377724,0,0.423863802319124,0,0,0.257640540045629,0,0,0,0.757301322732344,0,0,0,0,0,0,0,0,0.365921118388786,0,0.348581828608555,0.414644220061482,0,0.36497735907583,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,1.50677127429638,2.10833939483032,0,0,0,0.289562613335158,0.61642896765115,0,2.57795831185113,0,0,0.128343036279748,0,1.30139853857622,0.773288812777695,0.335032530668698,0.637938751653163,0.749007023947182,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0,0,0.364182336013434,0.131124414959424,0,0,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0,0.412164046590889,0.457847324091717,0.330037999682352,0,0,0,0.096670718292122,0,0.15350367472613,0.275673144969061,0.107420244868274,0.290033387828457,0.340906509664404,0,0.165284915360978,0.192190067365106,0.382838137483752,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0.143124886741991,0.744316738719335,0,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0.476463550915578,0,0,0,0,0.427296284509893,0,0.245040215981032,0.371606350251437,0,1.28055318027145,0.159426272728822,0.399158742865633,0.191505370132367,0.211673582723883,0.973865820823666,0.280797178113459,0.456469358066384,0.156679895773023,0,0.338583555603207,0.481764225311099,1.00899853595524,0.425846237690326,0.343505344755765,0,0.223676107892416,0,0.781552381608161,0.278406173895242,0,0.270455678475983,0.99921590399346,0,0,0,0.121360521749513,0.445773537109913,2.27308917445131,0,0,0.614321404198464,0,0,0.556543525114529,0,2.74463030566391,0,0.276283915531148,0.755798243562828,0.20453736500431,0.615424027305347,0,0.539210106883961,0.716084698702437,1.02314474045374,0,0,0,0,0,0,1.30213880542617,0.174919999992391,0,0.682760689712998,1.5255219017566,0,1.72371686620732,1.16641845353302,0,0,0.120596438625408,0,0.552896299656123,0.295547618953547,0,0.10893846351899,0.975966209950223,0.0769502585037971,0.113942055847001,0.23056390438806,0.269272933229316,0.325942115766024,0,0,0,3.06579894587209,0.941881538370149,0.831058409500782,0.225595660617181,0.392125068635479,0.335643173951685,1.3282761290693,0.476809736941136,0.210998064528027,0.326465616318295,0.282706142867882,0,0,0,0,0.889563386041866,0.247127877893006,0.208843899010911,0,0,0,0.729819156862664,0.978323094660449,0.971121518136371,0.394584402849391,0,0,0,0.150323419414493,0,0.664653872707185,0,0.627865836814451,0,0,0,0.173559738335131,0.195984794828755,0.69647365264322,0,0.687944129886466,0.19351266257817,0.219267951258557,0.164230914106418,0,0.264768380074501,0,0.137041924646751,0,0,1.17330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| ||
|short_description=p@chr8:103834895..103834918,- | |short_description=p@chr8:103834895..103834918,- | ||
}} | }} |
Latest revision as of 13:41, 31 July 2015
Short description: | p@chr8:103834895..103834918, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:103834895..103834918, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.29e-09 | 48 |
phagocyte | 7.29e-09 | 48 |
nongranular leukocyte | 4.33e-07 | 115 |
pneumocyte | 5.03e-07 | 3 |
classical monocyte | 7.23e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.23e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.79e-10 | 2 |
alveolar duct | 3.79e-10 | 2 |
bronchiole | 3.79e-10 | 2 |
pulmonary alveolus epithelium | 5.03e-07 | 3 |
alveolus | 5.03e-07 | 3 |
pulmonary lobule | 5.03e-07 | 3 |
lobule | 5.03e-07 | 3 |
alveolus of lung | 5.03e-07 | 3 |
alveolar system | 5.03e-07 | 3 |
pulmonary acinus | 5.03e-07 | 3 |
alveolar sac | 5.03e-07 | 3 |
alveolar wall | 5.03e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.79e-10 | 2 |
organ system cancer | 7.73e-09 | 137 |
cancer | 1.06e-08 | 235 |
disease of cellular proliferation | 2.18e-08 | 239 |