FFCP PHASE1:Hg19::chr7:94292726..94292754,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:94292726..94292754,- | |||
|coexpression_cluster_id=C340 | |||
|description=CAGE_peak_at_chr7:94292726..94292754,- | |description=CAGE_peak_at_chr7:94292726..94292754,- | ||
|id=chr7:94292726..94292754,- | |id=chr7:94292726..94292754,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.73e-07;11!UBERON:0001041;5.91e-07;30 | |||
|ontology_enrichment_disease=DOID:0050687!1.24e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.23e-24!94;UBERON:0001016!2.23e-24!94;UBERON:0001017!6.09e-23!82;UBERON:0005743!8.05e-23!86;UBERON:0002616!1.33e-21!59;UBERON:0000955!1.97e-21!69;UBERON:0006238!1.97e-21!69;UBERON:0001049!7.96e-21!57;UBERON:0005068!7.96e-21!57;UBERON:0006241!7.96e-21!57;UBERON:0007135!7.96e-21!57;UBERON:0002346!2.88e-19!90;UBERON:0003075!3.01e-17!86;UBERON:0007284!3.01e-17!86;UBERON:0000924!7.49e-17!173;UBERON:0006601!7.49e-17!173;UBERON:0000153!1.16e-15!129;UBERON:0007811!1.16e-15!129;UBERON:0003080!2.27e-15!42;UBERON:0004121!3.26e-15!169;UBERON:0000033!8.72e-15!123;UBERON:0002780!1.01e-14!41;UBERON:0001890!1.01e-14!41;UBERON:0006240!1.01e-14!41;UBERON:0003056!1.30e-14!61;UBERON:0000481!1.78e-13!347;UBERON:0000119!5.16e-12!312;UBERON:0000483!5.62e-12!309;UBERON:0001869!3.96e-11!32;UBERON:0002020!4.28e-11!34;UBERON:0003528!4.28e-11!34;UBERON:0000475!4.89e-11!365;UBERON:0001893!8.30e-11!34;UBERON:0002791!1.45e-10!33;UBERON:0000064!1.84e-10!219;UBERON:0001950!5.06e-10!20;UBERON:0000956!7.43e-10!25;UBERON:0000203!7.43e-10!25;UBERON:0000477!1.92e-09!286;UBERON:0002619!2.44e-09!22;UBERON:0000922!2.03e-08!612;UBERON:0000025!3.59e-08!194;UBERON:0004732!1.62e-07!13;UBERON:0002050!3.24e-07!605;UBERON:0005423!3.24e-07!605;UBERON:0000923!5.82e-07!604;UBERON:0005291!5.82e-07!604;UBERON:0006598!5.82e-07!604;UBERON:0002532!5.82e-07!604;UBERON:0004733!7.70e-07!12;UBERON:0002028!7.70e-07!12;UBERON:0007277!7.70e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!2.23e-24!94;UBERON:0001016!2.23e-24!94;UBERON:0001017!6.09e-23!82;UBERON:0005743!8.05e-23!86;UBERON:0002616!1.33e-21!59;UBERON:0000955!1.97e-21!69;UBERON:0006238!1.97e-21!69;UBERON:0001049!7.96e-21!57;UBERON:0005068!7.96e-21!57;UBERON:0006241!7.96e-21!57;UBERON:0007135!7.96e-21!57;UBERON:0002346!2.88e-19!90;UBERON:0003075!3.01e-17!86;UBERON:0007284!3.01e-17!86;UBERON:0000924!7.49e-17!173;UBERON:0006601!7.49e-17!173;UBERON:0000153!1.16e-15!129;UBERON:0007811!1.16e-15!129;UBERON:0003080!2.27e-15!42;UBERON:0004121!3.26e-15!169;UBERON:0000033!8.72e-15!123;UBERON:0002780!1.01e-14!41;UBERON:0001890!1.01e-14!41;UBERON:0006240!1.01e-14!41;UBERON:0003056!1.30e-14!61;UBERON:0000481!1.78e-13!347;UBERON:0000119!5.16e-12!312;UBERON:0000483!5.62e-12!309;UBERON:0001869!3.96e-11!32;UBERON:0002020!4.28e-11!34;UBERON:0003528!4.28e-11!34;UBERON:0000475!4.89e-11!365;UBERON:0001893!8.30e-11!34;UBERON:0002791!1.45e-10!33;UBERON:0000064!1.84e-10!219;UBERON:0001950!5.06e-10!20;UBERON:0000956!7.43e-10!25;UBERON:0000203!7.43e-10!25;UBERON:0000477!1.92e-09!286;UBERON:0002619!2.44e-09!22;UBERON:0000922!2.03e-08!612;UBERON:0000025!3.59e-08!194;UBERON:0004732!1.62e-07!13;UBERON:0002050!3.24e-07!605;UBERON:0005423!3.24e-07!605;UBERON:0000923!5.82e-07!604;UBERON:0005291!5.82e-07!604;UBERON:0006598!5.82e-07!604;UBERON:0002532!5.82e-07!604;UBERON:0004733!7.70e-07!12;UBERON:0002028!7.70e-07!12;UBERON:0007277!7.70e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.00e-08;41!UBERON:0001890;8.00e-08;41!UBERON:0000007;1.51e-07;2!UBERON:0000369;2.10e-07;4!UBERON:0002435;2.10e-07;4!UBERON:0000204;2.10e-07;4!UBERON:0000073;2.47e-07;53!UBERON:0002616;2.47e-07;53!UBERON:0002791;7.03e-07;32!UBERON:0001869;7.84e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.58e-12,81;UBERON:0001016,2.98e-11,89;UBERON:0001049,5.06e-11,56;UBERON:0005068,5.06e-11,56;UBERON:0006241,5.06e-11,56;UBERON:0007135,5.06e-11,56;UBERON:0002346,7.66e-11,86;UBERON:0000955,1.41e-10,68;UBERON:0006238,1.41e-10,68;UBERON:0000073,2.63e-10,53;UBERON:0002616,2.63e-10,53;UBERON:0011216,1.07e-09,223;UBERON:0003075,2.39e-09,82;UBERON:0007284,2.39e-09,82;UBERON:0002780,3.16e-09,41;UBERON:0001890,3.16e-09,41;UBERON:0003080,3.16e-09,41;UBERON:0006240,3.16e-09,41;UBERON:0003056,1.56e-08,61;UBERON:0000369,1.21e-07,4;UBERON:0002435,1.21e-07,4;UBERON:0000204,1.21e-07,4;UBERON:0010082,1.21e-07,4;UBERON:0000007,1.75e-07,2;UBERON:0010371,2.45e-07,104;UBERON:0004121,4.26e-07,171;UBERON:0000924,4.26e-07,171;UBERON:0006601,4.26e-07,171;UBERON:0002791,4.27e-07,32;UBERON:0001869,4.27e-07,32 | |||
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| ||
|short_description=p@chr7:94292726..94292754,- | |short_description=p@chr7:94292726..94292754,- | ||
}} | }} |
Latest revision as of 12:50, 31 July 2015
Short description: | p@chr7:94292726..94292754, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:94292726..94292754, - |
Coexpression cluster: | C340_hepatocellular_skeletal_breast_putamen_mucinous_pituitary_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.58e-12 | 81 |
nervous system | 2.98e-11 | 89 |
neural tube | 5.06e-11 | 56 |
neural rod | 5.06e-11 | 56 |
future spinal cord | 5.06e-11 | 56 |
neural keel | 5.06e-11 | 56 |
neurectoderm | 7.66e-11 | 86 |
brain | 1.41e-10 | 68 |
future brain | 1.41e-10 | 68 |
regional part of nervous system | 2.63e-10 | 53 |
regional part of brain | 2.63e-10 | 53 |
organ system subdivision | 1.07e-09 | 223 |
neural plate | 2.39e-09 | 82 |
presumptive neural plate | 2.39e-09 | 82 |
regional part of forebrain | 3.16e-09 | 41 |
forebrain | 3.16e-09 | 41 |
anterior neural tube | 3.16e-09 | 41 |
future forebrain | 3.16e-09 | 41 |
pre-chordal neural plate | 1.56e-08 | 61 |
corpus striatum | 1.21e-07 | 4 |
striatum | 1.21e-07 | 4 |
ventral part of telencephalon | 1.21e-07 | 4 |
future corpus striatum | 1.21e-07 | 4 |
pituitary gland | 1.75e-07 | 2 |
ecto-epithelium | 2.45e-07 | 104 |
ectoderm-derived structure | 4.26e-07 | 171 |
ectoderm | 4.26e-07 | 171 |
presumptive ectoderm | 4.26e-07 | 171 |
regional part of telencephalon | 4.27e-07 | 32 |
cerebral hemisphere | 4.27e-07 | 32 |