FFCP PHASE1:Hg19::chr7:93516035..93516056,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-76bp_to_CU675118_5end | |association_with_transcript=-76bp_to_CU675118_5end | ||
|cluster_id=chr7:93516035..93516056,+ | |||
|coexpression_cluster_id=C378 | |coexpression_cluster_id=C378 | ||
|description=CAGE_peak_1_at_CU675118_5end | |description=CAGE_peak_1_at_CU675118_5end | ||
|id=chr7:93516035..93516056,+ | |id=chr7:93516035..93516056,+ | ||
|ontology_enrichment_celltype=CL:0000192!5.28e-31!42;CL:0000514!5.28e-31!42;CL:0000680!5.84e-31!57;CL:0000056!5.84e-31!57;CL:0000355!5.84e-31!57;CL:0000359!1.17e-30!32;CL:0000187!2.14e-30!54;CL:0000183!5.26e-29!59;CL:0000393!9.04e-27!60;CL:0000211!9.04e-27!60;CL:0000222!5.24e-21!119;CL:0000055!3.70e-20!180;CL:0000548!3.49e-11!679;CL:0000004!3.49e-11!679;CL:0000255!3.49e-11!679;CL:0000012!6.79e-11!682;CL:0002539!1.15e-10!10;CL:0000144!2.25e-10!625;CL:0002494!9.24e-10!16;CL:0002371!3.01e-09!591;CL:0000220!4.04e-09!246;CL:0002321!7.18e-09!248;CL:0000723!1.55e-08!436;CL:0000048!1.87e-08!430;CL:0000034!8.27e-08!444;CL:0000003!2.56e-07!722;CL:0002595!4.31e-07!5 | |ontology_enrichment_celltype=CL:0000192!5.28e-31!42;CL:0000514!5.28e-31!42;CL:0000680!5.84e-31!57;CL:0000056!5.84e-31!57;CL:0000355!5.84e-31!57;CL:0000359!1.17e-30!32;CL:0000187!2.14e-30!54;CL:0000183!5.26e-29!59;CL:0000393!9.04e-27!60;CL:0000211!9.04e-27!60;CL:0000222!5.24e-21!119;CL:0000055!3.70e-20!180;CL:0000548!3.49e-11!679;CL:0000004!3.49e-11!679;CL:0000255!3.49e-11!679;CL:0000012!6.79e-11!682;CL:0002539!1.15e-10!10;CL:0000144!2.25e-10!625;CL:0002494!9.24e-10!16;CL:0002371!3.01e-09!591;CL:0000220!4.04e-09!246;CL:0002321!7.18e-09!248;CL:0000723!1.55e-08!436;CL:0000048!1.87e-08!430;CL:0000034!8.27e-08!444;CL:0000003!2.56e-07!722;CL:0002595!4.31e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.49e-40;32!CL:0000192;6.34e-32;43!CL:0000187;9.28e-18;55!CL:0000393;2.10e-15;61!CL:0000211;2.10e-15;61!CL:0002539;1.85e-14;10!CL:0002595;1.43e-13;5!CL:0002594;7.49e-10;4!CL:0002494;2.53e-09;16!CL:0002504;3.94e-07;3!CL:1000279;3.94e-07;3!CL:1000280;3.94e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.94e-43,43;CL:0000514,2.94e-43,43;CL:0000359,7.08e-42,32;CL:0000680,1.17e-34,58;CL:0000056,1.17e-34,58;CL:0000355,1.17e-34,58;CL:0000187,1.91e-34,55;CL:0000393,3.62e-30,61;CL:0000211,3.62e-30,61;CL:0000222,3.42e-15,121;CL:0002539,1.83e-14,10;CL:0002595,1.80e-13,5;CL:0000048,5.20e-12,427;CL:0000723,1.30e-11,433;CL:0000034,4.25e-11,441;CL:0002594,7.43e-10,4;CL:0002494,2.64e-09,16;CL:0002504,2.34e-07,3;CL:1000279,2.34e-07,3;CL:1000280,2.34e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;6.34e-32;43!CL:0000355;6.08e-17;58 | |||
|ontology_enrichment_disease=DOID:2394!1.19e-14!14;DOID:120!1.65e-09!27;DOID:193!1.87e-08!29 | |ontology_enrichment_disease=DOID:2394!1.19e-14!14;DOID:120!1.65e-09!27;DOID:193!1.87e-08!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.90e-20;14!DOID:120;7.11e-13;27!DOID:193;9.17e-12;29!DOID:0060084;5.55e-09;3!DOID:127;5.55e-09;3!DOID:0060072;8.43e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.09e-20,14;DOID:120,5.17e-13,27;DOID:193,6.84e-12,29;DOID:0060084,5.64e-09,3;DOID:127,5.64e-09,3;DOID:0060072,8.53e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004290!2.59e-28!70;UBERON:0001134!9.34e-28!61;UBERON:0002036!9.34e-28!61;UBERON:0003082!9.34e-28!61;UBERON:0000914!1.18e-27!83;UBERON:0002329!1.18e-27!83;UBERON:0003077!1.18e-27!83;UBERON:0003059!1.18e-27!83;UBERON:0007282!1.18e-27!83;UBERON:0009618!1.18e-27!83;UBERON:0007285!1.18e-27!83;UBERON:0004872!3.64e-27!84;UBERON:0002385!2.58e-26!63;UBERON:0001015!2.58e-26!63;UBERON:0000383!2.58e-26!63;UBERON:0000486!5.32e-26!82;UBERON:0001981!4.89e-25!60;UBERON:0007500!4.89e-25!60;UBERON:0004537!4.89e-25!60;UBERON:0006965!4.89e-25!60;UBERON:0001637!9.69e-24!42;UBERON:0003509!9.69e-24!42;UBERON:0004572!9.69e-24!42;UBERON:0002049!3.17e-22!79;UBERON:0007798!3.17e-22!79;UBERON:0005256!3.40e-21!143;UBERON:0003914!1.17e-20!118;UBERON:0000055!1.29e-20!69;UBERON:0004535!5.26e-20!110;UBERON:0000490!1.25e-19!138;UBERON:0004573!2.70e-19!33;UBERON:0004571!2.70e-19!33;UBERON:0001009!6.25e-19!113;UBERON:0002100!5.45e-14!216;UBERON:0000483!2.86e-13!309;UBERON:0000119!2.96e-13!312;UBERON:0001135!6.12e-11!15;UBERON:0004237!1.15e-10!10;UBERON:0004695!1.15e-10!10;UBERON:0002111!1.15e-10!10;UBERON:0004178!1.15e-10!10;UBERON:0003104!2.73e-10!238;UBERON:0009142!2.73e-10!238;UBERON:0000926!2.33e-09!448;UBERON:0004120!2.33e-09!448;UBERON:0006603!2.33e-09!448;UBERON:0000948!1.06e-08!24;UBERON:0005498!1.06e-08!24;UBERON:0004140!1.06e-08!24;UBERON:0009881!1.06e-08!24;UBERON:0004141!1.06e-08!24;UBERON:0003084!1.06e-08!24;UBERON:0007005!1.06e-08!24;UBERON:0004139!1.06e-08!24;UBERON:0004291!1.06e-08!24;UBERON:0000947!1.07e-08!21;UBERON:0010191!1.07e-08!21;UBERON:0000992!4.02e-08!13;UBERON:0003513!2.29e-07!8;UBERON:0000481!3.36e-07!347;UBERON:0007100!3.50e-07!27;UBERON:0003834!4.31e-07!5;UBERON:0001533!4.31e-07!5;UBERON:0000025!5.10e-07!194;UBERON:0000475!6.78e-07!365 | |ontology_enrichment_uberon=UBERON:0004290!2.59e-28!70;UBERON:0001134!9.34e-28!61;UBERON:0002036!9.34e-28!61;UBERON:0003082!9.34e-28!61;UBERON:0000914!1.18e-27!83;UBERON:0002329!1.18e-27!83;UBERON:0003077!1.18e-27!83;UBERON:0003059!1.18e-27!83;UBERON:0007282!1.18e-27!83;UBERON:0009618!1.18e-27!83;UBERON:0007285!1.18e-27!83;UBERON:0004872!3.64e-27!84;UBERON:0002385!2.58e-26!63;UBERON:0001015!2.58e-26!63;UBERON:0000383!2.58e-26!63;UBERON:0000486!5.32e-26!82;UBERON:0001981!4.89e-25!60;UBERON:0007500!4.89e-25!60;UBERON:0004537!4.89e-25!60;UBERON:0006965!4.89e-25!60;UBERON:0001637!9.69e-24!42;UBERON:0003509!9.69e-24!42;UBERON:0004572!9.69e-24!42;UBERON:0002049!3.17e-22!79;UBERON:0007798!3.17e-22!79;UBERON:0005256!3.40e-21!143;UBERON:0003914!1.17e-20!118;UBERON:0000055!1.29e-20!69;UBERON:0004535!5.26e-20!110;UBERON:0000490!1.25e-19!138;UBERON:0004573!2.70e-19!33;UBERON:0004571!2.70e-19!33;UBERON:0001009!6.25e-19!113;UBERON:0002100!5.45e-14!216;UBERON:0000483!2.86e-13!309;UBERON:0000119!2.96e-13!312;UBERON:0001135!6.12e-11!15;UBERON:0004237!1.15e-10!10;UBERON:0004695!1.15e-10!10;UBERON:0002111!1.15e-10!10;UBERON:0004178!1.15e-10!10;UBERON:0003104!2.73e-10!238;UBERON:0009142!2.73e-10!238;UBERON:0000926!2.33e-09!448;UBERON:0004120!2.33e-09!448;UBERON:0006603!2.33e-09!448;UBERON:0000948!1.06e-08!24;UBERON:0005498!1.06e-08!24;UBERON:0004140!1.06e-08!24;UBERON:0009881!1.06e-08!24;UBERON:0004141!1.06e-08!24;UBERON:0003084!1.06e-08!24;UBERON:0007005!1.06e-08!24;UBERON:0004139!1.06e-08!24;UBERON:0004291!1.06e-08!24;UBERON:0000947!1.07e-08!21;UBERON:0010191!1.07e-08!21;UBERON:0000992!4.02e-08!13;UBERON:0003513!2.29e-07!8;UBERON:0000481!3.36e-07!347;UBERON:0007100!3.50e-07!27;UBERON:0003834!4.31e-07!5;UBERON:0001533!4.31e-07!5;UBERON:0000025!5.10e-07!194;UBERON:0000475!6.78e-07!365 | ||
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| ||
|short_description=p1@CU675118 | |short_description=p1@CU675118 | ||
}} | }} |
Latest revision as of 12:35, 31 July 2015
Short description: | p1@CU675118 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU675118_5end |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | -76bp_to_CU675118_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.94e-43 | 43 |
smooth muscle myoblast | 2.94e-43 | 43 |
vascular associated smooth muscle cell | 7.08e-42 | 32 |
muscle precursor cell | 1.17e-34 | 58 |
myoblast | 1.17e-34 | 58 |
multi-potent skeletal muscle stem cell | 1.17e-34 | 58 |
muscle cell | 1.91e-34 | 55 |
electrically responsive cell | 3.62e-30 | 61 |
electrically active cell | 3.62e-30 | 61 |
mesodermal cell | 3.42e-15 | 121 |
aortic smooth muscle cell | 1.83e-14 | 10 |
smooth muscle cell of the subclavian artery | 1.80e-13 | 5 |
multi fate stem cell | 5.20e-12 | 427 |
somatic stem cell | 1.30e-11 | 433 |
stem cell | 4.25e-11 | 441 |
smooth muscle cell of the umbilical artery | 7.43e-10 | 4 |
cardiocyte | 2.64e-09 | 16 |
enteric smooth muscle cell | 2.34e-07 | 3 |
smooth muscle cell of large intestine | 2.34e-07 | 3 |
smooth muscle cell of colon | 2.34e-07 | 3 |
Ontology term | p-value | n |
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