FFCP PHASE1:Hg19::chr7:75924283..75924306,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:75924283..75924306,+ | |||
|coexpression_cluster_id=C411 | |||
|description=CAGE_peak_at_chr7:75924283..75924306,+ | |description=CAGE_peak_at_chr7:75924283..75924306,+ | ||
|id=chr7:75924283..75924306,+ | |id=chr7:75924283..75924306,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.92e-12!45;CL:0002057!4.39e-11!42;CL:0000839!8.59e-08!70;CL:0000557!1.37e-07!71 | |ontology_enrichment_celltype=CL:0000860!4.92e-12!45;CL:0002057!4.39e-11!42;CL:0000839!8.59e-08!70;CL:0000557!1.37e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.28e-10;5!CL:0000860;2.73e-08;33!CL:0002057;2.73e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.16e-10,5;CL:0002028,7.16e-10,5;CL:0000839,5.26e-07,66;CL:0000557,7.14e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.85e-25!115;UBERON:0001049!1.27e-17!57;UBERON:0005068!1.27e-17!57;UBERON:0006241!1.27e-17!57;UBERON:0007135!1.27e-17!57;UBERON:0002346!3.46e-15!90;UBERON:0003075!3.39e-14!86;UBERON:0007284!3.39e-14!86;UBERON:0002616!5.59e-14!59;UBERON:0002298!3.39e-12!8;UBERON:0003080!4.53e-12!42;UBERON:0000955!2.60e-11!69;UBERON:0006238!2.60e-11!69;UBERON:0002780!4.80e-11!41;UBERON:0001890!4.80e-11!41;UBERON:0006240!4.80e-11!41;UBERON:0001017!6.13e-11!82;UBERON:0005743!9.80e-11!86;UBERON:0002020!1.71e-10!34;UBERON:0003528!1.71e-10!34;UBERON:0002420!2.63e-10!9;UBERON:0007245!2.63e-10!9;UBERON:0010009!2.63e-10!9;UBERON:0010011!2.63e-10!9;UBERON:0000454!2.63e-10!9;UBERON:0002308!3.16e-10!9;UBERON:0000125!3.16e-10!9;UBERON:0001893!4.17e-10!34;UBERON:0000062!1.01e-09!511;UBERON:0000073!1.08e-09!94;UBERON:0001016!1.08e-09!94;UBERON:0002791!1.80e-09!33;UBERON:0001869!2.32e-08!32;UBERON:0003056!4.76e-08!61;UBERON:0009663!1.30e-07!7;UBERON:0000924!1.33e-07!173;UBERON:0006601!1.33e-07!173;UBERON:0003076!5.58e-07!15;UBERON:0003057!5.58e-07!15;UBERON:0004121!6.10e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;8.58e-12;2!UBERON:0002420;6.73e-09;9!UBERON:0000125;6.73e-09;9!UBERON:0007245;6.73e-09;9!UBERON:0002308;6.73e-09;9!UBERON:0010009;6.73e-09;9!UBERON:0010011;6.73e-09;9!UBERON:0000454;6.73e-09;9!UBERON:0002298;3.19e-08;6!UBERON:0003978;3.91e-08;3!UBERON:0000946;3.91e-08;3!UBERON:0001896;6.56e-08;3!UBERON:0005290;6.56e-08;3!UBERON:0000996;7.48e-07;1!UBERON:0009663;7.78e-07;7!UBERON:0002134;8.79e-07;1!UBERON:0005208;8.79e-07;1!UBERON:0004145;8.79e-07;1!UBERON:0005946;8.79e-07;1!UBERON:0005965;8.79e-07;1!UBERON:0002078;8.79e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,8.17e-12,2;UBERON:0000125,5.33e-09,9;UBERON:0002308,5.33e-09,9;UBERON:0002420,6.06e-09,9;UBERON:0007245,6.06e-09,9;UBERON:0010009,6.06e-09,9;UBERON:0010011,6.06e-09,9;UBERON:0000454,6.06e-09,9;UBERON:0002298,2.89e-08,6;UBERON:0003978,3.78e-08,3;UBERON:0009751,3.78e-08,3;UBERON:0000946,3.78e-08,3;UBERON:0002523,3.78e-08,3;UBERON:0005983,3.78e-08,3;UBERON:0002165,3.78e-08,3;UBERON:0002062,3.78e-08,3;UBERON:0007280,3.78e-08,3;UBERON:0007023,6.42e-08,114;UBERON:0001896,6.57e-08,3;UBERON:0005290,6.57e-08,3;UBERON:0010096,6.57e-08,3;UBERON:0002346,3.80e-07,86;UBERON:0009663,6.74e-07,7;UBERON:0000996,7.49e-07,1;UBERON:0002134,8.81e-07,1;UBERON:0005208,8.81e-07,1;UBERON:0005946,8.81e-07,1;UBERON:0005965,8.81e-07,1;UBERON:0002078,8.81e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0.377875943688809,0.485168122375632,0,0.411167888021826,4.02618282163635,0.575384784644301,0.512321413058201,1.89185783910868,0.344745680736619,0,2.70852973188684,0.376484679085209,0.545812300115692,1.57306439111559,0,0.320929027076094,0.639337125799041,0.329851300186716,0,1.27867425159808,0,0,1.24564449799115,0.75374599577023,1.5644487552606,2.17188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,3.43394464837949,0,0,0,0,0,0,0,0.290633938513962,0,0,0,3.52457796419313,1.15295962733569,10.7306068412423,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53380451249978,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42475863650862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0.307160702099232,0.994147647766298,1.40669416410513,0,0,0,1.9924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,8.69999490521752,0,0,0,0,0,0.173624994933292,1.77148277162768,0.482385754501632,0,0.331737779793674,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.19351266257817,0,0.0821154570532092,1.26085721434945,0,0,0,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0.101998217636322,0,1.20084057741958,0.410716136675979,0,0,0,3.90995361781156,0,7.17873024576814,0.199679000498991,0.429226048136571,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0.0846733320657845,0,0.544813624446302,0,0,0,0,0,0.121499113316049,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,2.65013777824443,0.517131825446202,1.58679122091228,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.250381861413,2.29363678276028,2.77322628842131,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,1.09209638192014,0,0,0.371807292777007,0,0,1.49837315502381,0,0,0,0.0642292250964595,0,0.478901577171454,0.41023272848151,0,0,0.161475645631851,0,0,0,0,0.231051332300676,0,0,0,0.300841313397029,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.826747186004736,0.0634158101939068,0,0,0,2.81393990975393,0,0,1.68141861109412,0,0,0,0,0,0.135939465953663,0,0,0,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0.150962843566674,0,0,0,0,0,0.785233868459781,2.37637120261669,0,0,0,0.515663103788617,0,0,0,0,0,0,1.72007499781742,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0.534434810531121,1.8378979906969,0,0.151557396436479,0,0,0.724030971033267,0,0,0,0.434523000071005,0,1.40023748211963,0.202117188958219,0.653150243690884,0,0.0673520530145875,0.215166616178029,1.33064142618405,0,0,0,0,0,0.611207220914332,0,40.6111632253163,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0.377875943688809,0.485168122375632,0,0.411167888021826,4.02618282163635,0.575384784644301,0.512321413058201,1.89185783910868,0.344745680736619,0,2.70852973188684,0.376484679085209,0.545812300115692,1.57306439111559,0,0.320929027076094,0.639337125799041,0.329851300186716,0,1.27867425159808,0,0,1.24564449799115,0.75374599577023,1.5644487552606,2.17188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,3.43394464837949,0,0,0,0,0,0,0,0.290633938513962,0,0,0,3.52457796419313,1.15295962733569,10.7306068412423,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53380451249978,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42475863650862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0.307160702099232,0.994147647766298,1.40669416410513,0,0,0,1.9924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,8.69999490521752,0,0,0,0,0,0.173624994933292,1.77148277162768,0.482385754501632,0,0.331737779793674,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.19351266257817,0,0.0821154570532092,1.26085721434945,0,0,0,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0.101998217636322,0,1.20084057741958,0.410716136675979,0,0,0,3.90995361781156,0,7.17873024576814,0.199679000498991,0.429226048136571,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0.0846733320657845,0,0.544813624446302,0,0,0,0,0,0.121499113316049,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,2.65013777824443,0.517131825446202,1.58679122091228,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.250381861413,2.29363678276028,2.77322628842131,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,1.09209638192014,0,0,0.371807292777007,0,0,1.49837315502381,0,0,0,0.0642292250964595,0,0.478901577171454,0.41023272848151,0,0,0.161475645631851,0,0,0,0,0.231051332300676,0,0,0,0.300841313397029,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.826747186004736,0.0634158101939068,0,0,0,2.81393990975393,0,0,1.68141861109412,0,0,0,0,0,0.135939465953663,0,0,0,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0.150962843566674,0,0,0,0,0,0.785233868459781,2.37637120261669,0,0,0,0.515663103788617,0,0,0,0,0,0,1.72007499781742,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0.534434810531121,1.8378979906969,0,0.151557396436479,0,0,0.724030971033267,0,0,0,0.434523000071005,0,1.40023748211963,0.202117188958219,0.653150243690884,0,0.0673520530145875,0.215166616178029,1.33064142618405,0,0,0,0,0,0.611207220914332,0,40.6111632253163,0,0 | ||
|short_description=p@chr7:75924283..75924306,+ | |short_description=p@chr7:75924283..75924306,+ | ||
}} | }} |
Latest revision as of 11:41, 31 July 2015
Short description: | p@chr7:75924283..75924306, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:75924283..75924306, + |
Coexpression cluster: | C411_vagina_Mast_breast_heart_CD14_aorta_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.16e-10 | 5 |
basophil mast progenitor cell | 7.16e-10 | 5 |
myeloid lineage restricted progenitor cell | 5.26e-07 | 66 |
granulocyte monocyte progenitor cell | 7.14e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 8.17e-12 | 2 |
neural nucleus | 5.33e-09 | 9 |
nucleus of brain | 5.33e-09 | 9 |
basal ganglion | 6.06e-09 | 9 |
nuclear complex of neuraxis | 6.06e-09 | 9 |
aggregate regional part of brain | 6.06e-09 | 9 |
collection of basal ganglia | 6.06e-09 | 9 |
cerebral subcortex | 6.06e-09 | 9 |
brainstem | 2.89e-08 | 6 |
valve | 3.78e-08 | 3 |
cardiac mesenchyme | 3.78e-08 | 3 |
cardial valve | 3.78e-08 | 3 |
tunica intima | 3.78e-08 | 3 |
heart layer | 3.78e-08 | 3 |
endocardium | 3.78e-08 | 3 |
endocardial cushion | 3.78e-08 | 3 |
presumptive endocardium | 3.78e-08 | 3 |
adult organism | 6.42e-08 | 114 |
medulla oblongata | 6.57e-08 | 3 |
myelencephalon | 6.57e-08 | 3 |
future myelencephalon | 6.57e-08 | 3 |
neurectoderm | 3.80e-07 | 86 |
telencephalic nucleus | 6.74e-07 | 7 |
vagina | 7.49e-07 | 1 |
tricuspid valve | 8.81e-07 | 1 |
right atrium valve | 8.81e-07 | 1 |
outflow tract of atrium | 8.81e-07 | 1 |
outflow part of right atrium | 8.81e-07 | 1 |
right cardiac atrium | 8.81e-07 | 1 |