FFCP PHASE1:Hg19::chr7:45956835..45956852,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:45956835..45956852,- | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_at_chr7:45956835..45956852,- | |description=CAGE_peak_at_chr7:45956835..45956852,- | ||
|id=chr7:45956835..45956852,- | |id=chr7:45956835..45956852,- | ||
|ontology_enrichment_celltype=CL:0000055!1.37e-10!180;CL:0000153!2.61e-08!9;CL:0000447!2.61e-08!9;CL:0000057!4.59e-08!75;CL:0002595!1.31e-07!5;CL:0002620!1.36e-07!23;CL:0000667!4.98e-07!6;CL:0000058!4.98e-07!6;CL:0000138!4.98e-07!6;CL:0000359!5.14e-07!32 | |ontology_enrichment_celltype=CL:0000055!1.37e-10!180;CL:0000153!2.61e-08!9;CL:0000447!2.61e-08!9;CL:0000057!4.59e-08!75;CL:0002595!1.31e-07!5;CL:0002620!1.36e-07!23;CL:0000667!4.98e-07!6;CL:0000058!4.98e-07!6;CL:0000138!4.98e-07!6;CL:0000359!5.14e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000153;5.82e-24;9!CL:0000447;5.82e-24;9!CL:0000138;1.60e-19;6!CL:0000327;3.36e-18;15!CL:0000499;4.70e-14;28!CL:0002620;1.14e-10;23!CL:0002589;5.16e-10;2!CL:0002595;1.18e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.78e-24,9;CL:0000447,2.78e-24,9;CL:0000058,1.68e-19,6;CL:0000138,1.68e-19,6;CL:0000327,2.07e-18,15;CL:0000499,2.98e-14,28;CL:0002620,8.97e-11,23;CL:0002589,5.19e-10,2;CL:0000057,2.76e-09,76;CL:0002595,1.57e-08,5;CL:0000151,7.01e-07,36;CL:0000214,8.51e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.35e-07!5;DOID:450!1.35e-07!5;DOID:66!1.35e-07!5;DOID:423!1.35e-07!5;DOID:0080000!1.35e-07!5;DOID:11722!1.35e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.20e-13;5!DOID:450;1.20e-13;5!DOID:66;1.20e-13;5!DOID:423;1.20e-13;5!DOID:0080000;1.20e-13;5!DOID:11722;1.20e-13;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.86e-14,5;DOID:450,9.86e-14,5;DOID:66,9.86e-14,5;DOID:423,9.86e-14,5;DOID:0080000,9.86e-14,5;DOID:11722,9.86e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!7.01e-08!6;UBERON:0002358!7.01e-08!6;UBERON:0003684!7.01e-08!6;UBERON:0001178!7.01e-08!6;UBERON:0003834!1.31e-07!5;UBERON:0001533!1.31e-07!5;UBERON:0002199!6.06e-07!45;UBERON:0002416!6.06e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;5.16e-10;2!UBERON:0007204;5.16e-10;2!UBERON:0003834;1.18e-08;5!UBERON:0001533;1.18e-08;5!UBERON:0004457;1.26e-07;9!UBERON:0000042;1.26e-07;9!UBERON:0002097;1.87e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,5.19e-10,2;UBERON:0007204,5.19e-10,2;UBERON:0002097,1.21e-08,41;UBERON:0003834,1.57e-08,5;UBERON:0001533,1.57e-08,5;UBERON:0002199,1.66e-07,46;UBERON:0002416,1.66e-07,46;UBERON:0006915,8.51e-07,3;UBERON:0007616,8.51e-07,3;UBERON:0002217,8.51e-07,3;UBERON:0002018,8.51e-07,3 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.986680828671798,1.0007329835313,0.446961094427288,2.61701557230111,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,26.3850581240733,15.0401373190767,8.69079113764942,3.1811437882044,5.83961844363163,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,0,0,0.354668382198357,0,1.06748995729705,1.2333377420858,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0.113432183160021,1.25572744982203,1.06778694409284,1.90738711043606,0.600182192168805,1.54578793857658,0.772921620136887,1.48893485065272,0.337552664482532,0.68205903612839,0.252433774244115,1.74894807420369,0,4.9701342952326,2.01504196455281,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0.241011029883482,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.434343920002738,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,0.356857977594324,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0.553107505625109,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,1.73675465473144,0,0.561320188866147,0.512556597022804,1.53512174720011,0.321707842287215,0,0,0.355123450626254,0.164254312027618,0,0.116210378459959,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,2.59453906745488,2.57624796135584,0,0.316379424718726,0,0,0,0.636406495851874,0,0,0,0,0.606547444719948,1.58510321173008,0,0,0.731140468893853,1.05650146756755,0,0,1.13008116620243,0.551365343546124,3.3171948762061,6.57676327880644,0,0,0.202910376962704,0,0,0,0,0,0,1.68886108238131,1.97576935775941,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,1.67121139316383,0.593929361665277,1.22864280839693,0,0,0,0,0,0.19924798825107,0,0,0,0,5.28767299025073,0.0898683511473268,0.358042349351218,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.638002319463839,0.274792780205587,4.26427820814908,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,1.39866726707491,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.134366944973453,3.24269895188163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0.25426853765475,3.25799761052228,0,0,0,0,0,0,0.146552233678082,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14186133417987,0,0,0,0,0.701139929541673,0,0.378806010550178,0.50313580350515,0.889811221596536,0.457680136793847,0.907385542579434,0.310874401165561,0,0,0,0,0,0,0.521745061811734,0,0.761610424337591,0,0,0,0,1.19428766609585,0,0,0.336749488765919,0,0,0,0,0,0,0,1.25362188757041,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.577628330751691,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,1.40538670403555,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,0,1.07963795609311,4.29976519098345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,1.86919826156599,0,0,0,0.892769693028288,0,0,0,0,0,0,0,0,0,0,1.84870251452567,1.29787968637137,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0.0814032686109745,0.213454691755431,0,0.269475606319761,0,0.122241444182866,0,0,0,0 | |phase1_expression=0.726713517082227,0.642301571672949,0.986680828671798,1.0007329835313,0.446961094427288,2.61701557230111,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,26.3850581240733,15.0401373190767,8.69079113764942,3.1811437882044,5.83961844363163,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,0,0,0.354668382198357,0,1.06748995729705,1.2333377420858,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0.113432183160021,1.25572744982203,1.06778694409284,1.90738711043606,0.600182192168805,1.54578793857658,0.772921620136887,1.48893485065272,0.337552664482532,0.68205903612839,0.252433774244115,1.74894807420369,0,4.9701342952326,2.01504196455281,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0.241011029883482,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.434343920002738,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,0.356857977594324,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0.553107505625109,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,1.73675465473144,0,0.561320188866147,0.512556597022804,1.53512174720011,0.321707842287215,0,0,0.355123450626254,0.164254312027618,0,0.116210378459959,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,2.59453906745488,2.57624796135584,0,0.316379424718726,0,0,0,0.636406495851874,0,0,0,0,0.606547444719948,1.58510321173008,0,0,0.731140468893853,1.05650146756755,0,0,1.13008116620243,0.551365343546124,3.3171948762061,6.57676327880644,0,0,0.202910376962704,0,0,0,0,0,0,1.68886108238131,1.97576935775941,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,1.67121139316383,0.593929361665277,1.22864280839693,0,0,0,0,0,0.19924798825107,0,0,0,0,5.28767299025073,0.0898683511473268,0.358042349351218,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.638002319463839,0.274792780205587,4.26427820814908,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,1.39866726707491,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.134366944973453,3.24269895188163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0.25426853765475,3.25799761052228,0,0,0,0,0,0,0.146552233678082,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14186133417987,0,0,0,0,0.701139929541673,0,0.378806010550178,0.50313580350515,0.889811221596536,0.457680136793847,0.907385542579434,0.310874401165561,0,0,0,0,0,0,0.521745061811734,0,0.761610424337591,0,0,0,0,1.19428766609585,0,0,0.336749488765919,0,0,0,0,0,0,0,1.25362188757041,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.577628330751691,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,1.40538670403555,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,0,1.07963795609311,4.29976519098345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,1.86919826156599,0,0,0,0.892769693028288,0,0,0,0,0,0,0,0,0,0,1.84870251452567,1.29787968637137,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0.0814032686109745,0.213454691755431,0,0.269475606319761,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr7:45956835..45956852,- | |short_description=p@chr7:45956835..45956852,- | ||
}} | }} |
Latest revision as of 10:26, 31 July 2015
Short description: | p@chr7:45956835..45956852, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:45956835..45956852, - |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.78e-24 | 9 |
carbohydrate secreting cell | 2.78e-24 | 9 |
chondroblast | 1.68e-19 | 6 |
chondrocyte | 1.68e-19 | 6 |
extracellular matrix secreting cell | 2.07e-18 | 15 |
stromal cell | 2.98e-14 | 28 |
skin fibroblast | 8.97e-11 | 23 |
smooth muscle cell of the brachiocephalic vasculature | 5.19e-10 | 2 |
fibroblast | 2.76e-09 | 76 |
smooth muscle cell of the subclavian artery | 1.57e-08 | 5 |
secretory cell | 7.01e-07 | 36 |
synovial cell | 8.51e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 5.19e-10 | 2 |
brachiocephalic vasculature | 5.19e-10 | 2 |
skin of body | 1.21e-08 | 41 |
thoracic segment blood vessel | 1.57e-08 | 5 |
subclavian artery | 1.57e-08 | 5 |
integument | 1.66e-07 | 46 |
integumental system | 1.66e-07 | 46 |
stratified squamous epithelium | 8.51e-07 | 3 |
layer of synovial tissue | 8.51e-07 | 3 |
synovial joint | 8.51e-07 | 3 |
synovial membrane of synovial joint | 8.51e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.86e-14 | 5 |
myotonic disease | 9.86e-14 | 5 |
muscle tissue disease | 9.86e-14 | 5 |
myopathy | 9.86e-14 | 5 |
muscular disease | 9.86e-14 | 5 |
myotonic dystrophy | 9.86e-14 | 5 |