FFCP PHASE1:Hg19::chr7:35077210..35077219,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:35077210..35077219,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr7:35077210..35077219,- | |description=CAGE_peak_at_chr7:35077210..35077219,- | ||
|id=chr7:35077210..35077219,- | |id=chr7:35077210..35077219,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.64e-07;2!CL:0000054;1.64e-07;2!CL:0000137;1.64e-07;2!CL:0000092;1.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,2.12e-07,2;CL:0000137,2.12e-07,2;CL:0000092,2.12e-07,2;CL:0000047,3.45e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;1.64e-07;2!DOID:4305;1.64e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:200,2.12e-07,2;DOID:4305,2.12e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001950!1.37e-14!20;UBERON:0002619!2.19e-14!22;UBERON:0000956!4.10e-14!25;UBERON:0000203!4.10e-14!25;UBERON:0001017!2.58e-13!82;UBERON:0005743!1.07e-12!86;UBERON:0001049!1.14e-11!57;UBERON:0005068!1.14e-11!57;UBERON:0006241!1.14e-11!57;UBERON:0007135!1.14e-11!57;UBERON:0001869!1.27e-11!32;UBERON:0000073!1.48e-11!94;UBERON:0001016!1.48e-11!94;UBERON:0001893!4.16e-11!34;UBERON:0002020!4.46e-11!34;UBERON:0003528!4.46e-11!34;UBERON:0000955!1.17e-10!69;UBERON:0006238!1.17e-10!69;UBERON:0003075!2.23e-10!86;UBERON:0007284!2.23e-10!86;UBERON:0002791!2.30e-10!33;UBERON:0002346!2.53e-10!90;UBERON:0002616!2.99e-10!59;UBERON:0001871!3.32e-08!7;UBERON:0002780!9.70e-08!41;UBERON:0001890!9.70e-08!41;UBERON:0006240!9.70e-08!41;UBERON:0003080!2.31e-07!42;UBERON:0000924!3.42e-07!173;UBERON:0006601!3.42e-07!173;UBERON:0000153!3.74e-07!129;UBERON:0007811!3.74e-07!129;UBERON:0000033!3.77e-07!123;UBERON:0004121!4.13e-07!169;UBERON:0000200!7.17e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007190;9.72e-14;1!UBERON:0001950;1.06e-09;20!UBERON:0002619;7.05e-09;22!UBERON:0001869;1.45e-08;32!UBERON:0001893;1.45e-08;34!UBERON:0001871;5.09e-08;6!UBERON:0000956;7.07e-08;25!UBERON:0000203;7.07e-08;25!UBERON:0000473;2.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007190,1.42e-13,1;UBERON:0001950,1.01e-09,20;UBERON:0001869,2.47e-09,32;UBERON:0002619,6.77e-09,22;UBERON:0001893,8.54e-09,34;UBERON:0001017,8.74e-09,81;UBERON:0001871,4.75e-08,6;UBERON:0000073,5.82e-08,53;UBERON:0002616,5.82e-08,53;UBERON:0000956,6.82e-08,25;UBERON:0000203,6.82e-08,25;UBERON:0001016,7.66e-08,89;UBERON:0001049,1.60e-07,56;UBERON:0005068,1.60e-07,56;UBERON:0006241,1.60e-07,56;UBERON:0007135,1.60e-07,56;UBERON:0000473,2.37e-07,8;UBERON:0002780,2.59e-07,41;UBERON:0001890,2.59e-07,41;UBERON:0003080,2.59e-07,41;UBERON:0006240,2.59e-07,41 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0.125542639594803,0.229240217243854,0,0.0787107813136792,0.786728553697808,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0.553995408531877,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0.411202997999018,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0.25618263945135,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0.443458794925128,0.087834785693126,1.96468613246569,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0.825354125820202,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0.81014194788176,0.267899184852239,0.22452937262617,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0,0,0,1.06748995729705,0.49333509683432,0.311211035399766,0,0,0,0.576175924479999,0,0.312160076830321,0,0,0.117434498643765,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0.508681776931463,0,0,0.286804595389004,0.243947412259191,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0.179060963239896,0,0.394061520403854,0.215627574859517,0.128343036279748,0.254094624222463,1.30139853857622,0,1.84267891867784,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0,0,0.686286847621712,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0.184161977871793,0.114814448164607,0.364182336013434,0,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0.325378394664303,0.206082023295445,0.366277859273374,0.165018999841176,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.170453254832202,0,0.330569830721956,0,0,0,0,0,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0.556812347790485,0,0,0.66614393599564,0,0,0,0.36408156524854,0,0.284136146806413,0.23874448473769,0,0.307160702099232,0.994147647766298,0.281338832821026,0,0.494411622680279,0,0,0,0,0.20453736500431,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0.344743373241465,0.583209226766509,0.173624994933292,0,0,3.05163472634166,0.774054819518572,0.591095237907095,0.219385397153973,0.21787692703798,0,0.153900517007594,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0.31396051279005,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0,0,1.20990716048664,0.61214552326098,0.189559738885464,0.150323419414493,0.311064574191741,0,0.330991955875499,0,0,0,0.138674673013139,0.347119476670262,0.195984794828755,0,0.17472666824203,0,0.19351266257817,0,0.0821154570532092,0,0.0882561266915003,0,0.411125773940253,0,0.379864775735272,0,0.240476460754601,0.640358984218058,0,0,0.229073192331831,0.343189995723929,0.432164393964449,0,0,0,0.313808538937,0,0,0,0,0,0.429765441419957,0,0,0.458320848023367,0,0,0,0,0.134366944973453,0,0,0,0.0824158583811665,0.13480708770837,0,0.0846733320657845,0,0.817220436669454,0,0,0.415440338029185,0,0,0.850493793212345,0,0,0.104909176269996,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0.387848869084652,0.13223260174269,0,0.704815022316672,0,0.471612915298998,0,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.854183854313742,0.625954653532499,0.573409195690071,0.110929051536852,0.310482014706917,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0.438568099157414,0,0.38582807654183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| ||
|short_description=p@chr7:35077210..35077219,- | |short_description=p@chr7:35077210..35077219,- | ||
}} | }} |
Latest revision as of 09:35, 31 July 2015
Short description: | p@chr7:35077210..35077219, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:35077210..35077219, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 2.12e-07 | 2 |
osteocyte | 2.12e-07 | 2 |
osteoclast | 2.12e-07 | 2 |
neuronal stem cell | 3.45e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
paracentral gyrus | 1.42e-13 | 1 |
neocortex | 1.01e-09 | 20 |
cerebral hemisphere | 2.47e-09 | 32 |
regional part of cerebral cortex | 6.77e-09 | 22 |
telencephalon | 8.54e-09 | 34 |
central nervous system | 8.74e-09 | 81 |
temporal lobe | 4.75e-08 | 6 |
regional part of nervous system | 5.82e-08 | 53 |
regional part of brain | 5.82e-08 | 53 |
cerebral cortex | 6.82e-08 | 25 |
pallium | 6.82e-08 | 25 |
nervous system | 7.66e-08 | 89 |
neural tube | 1.60e-07 | 56 |
neural rod | 1.60e-07 | 56 |
future spinal cord | 1.60e-07 | 56 |
neural keel | 1.60e-07 | 56 |
testis | 2.37e-07 | 8 |
regional part of forebrain | 2.59e-07 | 41 |
forebrain | 2.59e-07 | 41 |
anterior neural tube | 2.59e-07 | 41 |
future forebrain | 2.59e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 2.12e-07 | 2 |
bone giant cell tumor | 2.12e-07 | 2 |