FFCP PHASE1:Hg19::chr7:28637859..28637875,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:28637859..28637875,+ | |||
|description=CAGE_peak_at_chr7:28637859..28637875,+ | |description=CAGE_peak_at_chr7:28637859..28637875,+ | ||
|id=chr7:28637859..28637875,+ | |id=chr7:28637859..28637875,+ | ||
|ontology_enrichment_celltype=CL:0002032!1.48e-10!165;CL:0000837!1.48e-10!165;CL:0000037!5.78e-10!172;CL:0000566!5.78e-10!172;CL:0000988!3.39e-09!182;CL:0000763!4.80e-09!112;CL:0000049!4.80e-09!112 | |ontology_enrichment_celltype=CL:0002032!1.48e-10!165;CL:0000837!1.48e-10!165;CL:0000037!5.78e-10!172;CL:0000566!5.78e-10!172;CL:0000988!3.39e-09!182;CL:0000763!4.80e-09!112;CL:0000049!4.80e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000322;6.88e-07;3!CL:0002178;7.28e-07;3 | |ontology_enrichment_celltype_v019=CL:0000322;6.88e-07;3!CL:0002178;7.28e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,6.88e-07,3;CL:0002178,7.28e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!1.04e-20!51;DOID:0060083!1.04e-20!51;DOID:1036!1.24e-18!8;DOID:8692!1.13e-14!31;DOID:1240!4.74e-14!39;DOID:0050686!9.65e-11!137;DOID:162!4.44e-09!235;DOID:14566!8.56e-09!239;DOID:4960!7.03e-08!1;DOID:0070004!7.03e-08!1;DOID:3112!2.07e-07!1;DOID:0060085!3.20e-07!1;DOID:3165!3.20e-07!1;DOID:0060121!3.20e-07!1;DOID:2438!3.20e-07!1;DOID:4418!3.20e-07!1 | |ontology_enrichment_disease=DOID:2531!1.04e-20!51;DOID:0060083!1.04e-20!51;DOID:1036!1.24e-18!8;DOID:8692!1.13e-14!31;DOID:1240!4.74e-14!39;DOID:0050686!9.65e-11!137;DOID:162!4.44e-09!235;DOID:14566!8.56e-09!239;DOID:4960!7.03e-08!1;DOID:0070004!7.03e-08!1;DOID:3112!2.07e-07!1;DOID:0060085!3.20e-07!1;DOID:3165!3.20e-07!1;DOID:0060121!3.20e-07!1;DOID:2438!3.20e-07!1;DOID:4418!3.20e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4960;3.16e-18;1!DOID:0070004;3.16e-18;1!DOID:3910;1.03e-09;2!DOID:3493;1.12e-09;2!DOID:4231;1.78e-09;2!DOID:1907;1.78e-09;2!DOID:8692;1.83e-08;31 | |ontology_enrichment_disease_v019=DOID:4960;3.16e-18;1!DOID:0070004;3.16e-18;1!DOID:3910;1.03e-09;2!DOID:3493;1.12e-09;2!DOID:4231;1.78e-09;2!DOID:1907;1.78e-09;2!DOID:8692;1.83e-08;31 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,3.16e-18,1;DOID:0070004,3.16e-18,1;DOID:3910,1.03e-09,2;DOID:3493,1.12e-09,2;DOID:4231,1.71e-09,2;DOID:1907,1.71e-09,2;DOID:0050686,4.85e-09,137;DOID:8692,6.60e-09,31;DOID:2531,3.19e-08,51;DOID:0060083,3.19e-08,51;DOID:162,1.42e-07,235;DOID:14566,2.14e-07,239;DOID:1240,3.95e-07,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.03e-09;2!UBERON:0002173;1.03e-09;2!UBERON:0002186;1.03e-09;2!UBERON:0004821;6.88e-07;3!UBERON:0007499;6.88e-07;3!UBERON:0003215;6.88e-07;3!UBERON:0010368;6.88e-07;3!UBERON:0009911;6.88e-07;3!UBERON:0002299;6.88e-07;3!UBERON:0006524;6.88e-07;3!UBERON:0008874;6.88e-07;3!UBERON:0002169;6.88e-07;3!UBERON:0004894;6.88e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004903;1.03e-09;2!UBERON:0002173;1.03e-09;2!UBERON:0002186;1.03e-09;2!UBERON:0004821;6.88e-07;3!UBERON:0007499;6.88e-07;3!UBERON:0003215;6.88e-07;3!UBERON:0010368;6.88e-07;3!UBERON:0009911;6.88e-07;3!UBERON:0002299;6.88e-07;3!UBERON:0006524;6.88e-07;3!UBERON:0008874;6.88e-07;3!UBERON:0002169;6.88e-07;3!UBERON:0004894;6.88e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.03e-09,2;UBERON:0002173,1.03e-09,2;UBERON:0002186,1.03e-09,2;UBERON:0004821,6.88e-07,3;UBERON:0003215,6.88e-07,3;UBERON:0010368,6.88e-07,3;UBERON:0009911,6.88e-07,3;UBERON:0002299,6.88e-07,3;UBERON:0006524,6.88e-07,3;UBERON:0008874,6.88e-07,3;UBERON:0002169,6.88e-07,3;UBERON:0004894,6.88e-07,3 | |||
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|short_description=p@chr7:28637859..28637875,+ | |short_description=p@chr7:28637859..28637875,+ | ||
}} | }} |
Latest revision as of 09:10, 31 July 2015
Short description: | p@chr7:28637859..28637875, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:28637859..28637875, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 6.88e-07 | 3 |
epithelial cell of stomach | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.03e-09 | 2 |
alveolar duct | 1.03e-09 | 2 |
bronchiole | 1.03e-09 | 2 |
pulmonary alveolus epithelium | 6.88e-07 | 3 |
alveolus | 6.88e-07 | 3 |
pulmonary lobule | 6.88e-07 | 3 |
lobule | 6.88e-07 | 3 |
alveolus of lung | 6.88e-07 | 3 |
alveolar system | 6.88e-07 | 3 |
pulmonary acinus | 6.88e-07 | 3 |
alveolar sac | 6.88e-07 | 3 |
alveolar wall | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 3.16e-18 | 1 |
myeloma | 3.16e-18 | 1 |
lung adenocarcinoma | 1.03e-09 | 2 |
signet ring cell adenocarcinoma | 1.12e-09 | 2 |
histiocytoma | 1.71e-09 | 2 |
malignant fibroxanthoma | 1.71e-09 | 2 |
organ system cancer | 4.85e-09 | 137 |
myeloid leukemia | 6.60e-09 | 31 |
hematologic cancer | 3.19e-08 | 51 |
immune system cancer | 3.19e-08 | 51 |
cancer | 1.42e-07 | 235 |
disease of cellular proliferation | 2.14e-07 | 239 |
leukemia | 3.95e-07 | 39 |