FFCP PHASE1:Hg19::chr7:2698019..2698038,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:2698019..2698038,+ | |||
|coexpression_cluster_id=C716 | |||
|description=CAGE_peak_at_chr7:2698019..2698038,+ | |||
|id=chr7:2698019..2698038,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.54e-12!246;CL:0002321!2.81e-12!248;CL:0000144!6.04e-10!625;CL:0000548!1.70e-09!679;CL:0000004!1.70e-09!679;CL:0000255!1.70e-09!679;CL:0000222!4.41e-09!119;CL:0000012!6.52e-09!682;CL:0002371!9.41e-09!591;CL:0000213!1.56e-08!57;CL:0000215!1.56e-08!57;CL:0000115!7.34e-08!35;CL:0000055!3.67e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.76e-10;6!CL:0000115;4.14e-09;36!CL:0000148;1.15e-08;10!CL:1000746;1.54e-08;7!CL:1000612;1.54e-08;7!CL:0000710;2.86e-08;20!CL:0002567;3.50e-08;3!CL:0000147;8.79e-08;14!CL:0000075;6.27e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.57e-10,36;CL:0000235,6.38e-10,6;CL:0000213,4.80e-09,58;CL:0000215,4.80e-09,58;CL:0000148,8.83e-09,10;CL:0000541,8.83e-09,10;CL:1000746,1.42e-08,7;CL:1000612,1.42e-08,7;CL:0000222,1.51e-08,121;CL:0002567,2.16e-08,3;CL:0002321,3.60e-08,250;CL:0000710,3.60e-08,20;CL:0000147,7.43e-08,14;CL:0002078,1.05e-07,45;CL:0000075,6.93e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.66e-08!659;UBERON:0000467!3.48e-08!625;UBERON:0003081!3.80e-08!216;UBERON:0000480!5.21e-08!626;UBERON:0000922!5.58e-08!612;UBERON:0002050!1.10e-07!605;UBERON:0005423!1.10e-07!605;UBERON:0000923!1.43e-07!604;UBERON:0005291!1.43e-07!604;UBERON:0006598!1.43e-07!604;UBERON:0002532!1.43e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.54e-08;7!UBERON:0001229;1.54e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.89e-11,203;UBERON:0010532,1.42e-08,7;UBERON:0000074,1.42e-08,7;UBERON:0001229,1.42e-08,7;UBERON:0001230,1.42e-08,7;UBERON:0003220,1.42e-08,7;UBERON:0005749,1.42e-08,7;UBERON:0004199,1.42e-08,7;UBERON:0004209,1.42e-08,7;UBERON:0004198,1.42e-08,7;UBERON:0005103,1.94e-07,8;UBERON:0000083,1.94e-07,8;UBERON:0009201,1.94e-07,8;UBERON:0006553,1.94e-07,8;UBERON:0003074,1.94e-07,8;UBERON:0003060,1.94e-07,8;UBERON:0004876,2.45e-07,11;UBERON:0002049,3.10e-07,78;UBERON:0007798,3.10e-07,78;UBERON:0000055,3.66e-07,68;UBERON:0004872,8.61e-07,83 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.281908808191942,0,0,0.872338524100369,0,0,0.522371256399677,0.245733936501509,2.09340350391728,0.436882744260345,1.05506791291381,0,0.331397375727916,2.01697543935533,0.602694528023977,0,1.95173119516203,0.246242116153576,1.83600622119828,2.19418305034661,0,1.23186982565596,0.753255837568817,0.152826811495903,0.492603536699674,0.472264687882075,0,0,0,0,0.90361775633475,0.739508020333575,0,0,0,0,0.601633342410425,0.651032612147555,1.11957737119962,0.647787332037959,1.03030227053675,1.16318591023652,0,0.727752183563449,0,0.411167888021826,0.929119112685311,0.863077176966451,0.256160706529101,0.945928919554341,0.689491361473237,0,0,1.12945403725563,0.545812300115692,0.224723484445085,0.918251677112708,0.320929027076094,1.27867425159808,1.31940520074686,0.797854630486527,0.426224750532694,2.03146467040009,0.56738522469114,0.622822248995575,0.502497330513487,1.0429658368404,0.65156653411535,2.42159801053347,0.368277635987565,0,0.211255286311942,0.637812899895131,0.209658645508376,0.22465726229299,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0.795285947051099,0,0.189069634328136,1.10864698731282,0.790513071238134,0.327447688744282,0.728590576585084,0,0.324547393654683,0.174129737299267,1.72845348674525,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,0,2.51699661725944,1.37559020970034,1.46296476575767,0,1.06729878806013,1.00416183829401,2.01414658554573,0.760272105718513,1.70843440283719,0.735326160691737,3.24056779152704,0.446498641420399,0.22452937262617,0,1.53316637465883,0.949265659568129,0.732806975721629,0,0,0.436094052142534,0,0.886413581652058,0,0.573673241497627,0.709336764396714,0.560677600142307,1.06748995729705,1.97334038733728,0.933633106199299,0.67355336034844,0.326923806226917,0.908144565869588,0,0.70296429550139,0,0,0.298897361103602,0.117434498643765,0,0.280901613404497,0.204154171254893,0.368502951935304,0.206651562351531,0,0.741800787835671,0,1.43723628363248,0.505008341862199,1.12606667884768,0,0,1.22595118319608,0.300476117813194,0.226864366320042,0,0,0,0.600182192168805,0.618315175430633,0,0.744467425326359,0,0.487185025805993,0.504867548488229,0.368199594569197,0.484938170456436,0,0.705264687593482,0.508681776931463,0,0.272746120590835,0.573609190778008,0.243947412259191,0,0.348581828608555,0.310983165046111,0.756962552626885,0,0,3.85944562915731,0,0,0,0.236613600079688,0.842923450390509,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,2.95262181849859,0,0,1.47008711385542,0,0,0,0,0.368965315629341,1.20097467208968,0.878002283269004,1.1240175325762,0.301586917234893,0.462942225792648,0,1.03993478527958,1.44331342025273,0.231860809950154,0,0.866198686566443,0,0.190254152234598,0,0,0.246217006087397,1.17002132569619,1.0404181360211,0,0.671928512795438,0.141775097242386,0,0,0,0.985326475791887,0.176096868026452,0,0.144119953416961,0,4.25435891757533,7.63976851116555,4.68869788840188,1.71072446022705,2.36503233217644,0.300343057843917,5.14487578735041,0.897048674762886,0,0.7333828582095,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,1.3321108950805,0.142977993658148,3.25572963234866,0,0,0.355391948742546,0.791951872933429,0,0,0.99972991182057,4.86495122564762,3.51579964002488,8.43335757932127,0,1.14861935834114,0,0,0.205476322550383,0.358121926479791,0.224170287987055,0,0,0,2.28685161800217,0,0.773288812777695,0.167516265334349,0,0,0,0,0.613457458595699,0,0.542530047399471,1.03985430765404,2.3195768543631,0.946214490203608,0,0,0,0,0.664225598535437,0.184369168541703,0.347534457872331,0.587403472388222,0.343143423810856,0.413536052245775,0.431428401637234,0.320182673410333,0,3.32870879020994,1.5119514666484,0.248107807818777,0,0.841980283299221,0.256278298511402,0.511707249066704,0.965123526861645,0,0.616838775210622,0.355123450626254,0.246381468041427,0.519254429183621,0.581051892299796,0.241718899183244,0.802025881213139,0.0920809889358963,0.459257792658427,0.546273504020151,0.393373244878272,0.451199612907412,0.308061348417659,0.784349769176855,0,0.949964660035881,1.13733384070897,0.510281115829547,0,12.3381802152231,1.62567862526312,3.51182841698397,0,0,0.895499018888713,0,0,0.256450125116389,0,0.650756789328606,0.206082023295445,0.27470839445503,0.082509499920588,0.574265537996172,1.95018073810956,1.6068392984416,0.96670718292122,0,0.15350367472613,0.275673144969061,0.429680979473094,0.725083469571143,0.0852266274161009,0.712256285173899,0.165284915360978,0.384380134730212,0.255225424989168,0.10115778085555,0.464845549297286,1.5740617341532,0.6970372701606,0.616067160352178,0,0.869932992075073,1.11194531462352,0.143124886741991,0,0.632758849437452,0,1.79128453917934,0.855877976067841,0,0,0.179872457583315,1.37268514868027,0.471249609382746,0.20218248157331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| |||
|short_description=p@chr7:2698019..2698038,+ | |||
}} |
Latest revision as of 08:58, 31 July 2015
Short description: | p@chr7:2698019..2698038, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:2698019..2698038, + |
Coexpression cluster: | C716_Melanocyte_Monocytederived_melanoma_Macrophage_Renal_CD14_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.57e-10 | 36 |
macrophage | 6.38e-10 | 6 |
lining cell | 4.80e-09 | 58 |
barrier cell | 4.80e-09 | 58 |
melanocyte | 8.83e-09 | 10 |
melanoblast | 8.83e-09 | 10 |
glomerular cell | 1.42e-08 | 7 |
kidney corpuscule cell | 1.42e-08 | 7 |
mesodermal cell | 1.51e-08 | 121 |
light melanocyte | 2.16e-08 | 3 |
embryonic cell | 3.60e-08 | 250 |
neurecto-epithelial cell | 3.60e-08 | 20 |
pigment cell | 7.43e-08 | 14 |
meso-epithelial cell | 1.05e-07 | 45 |
columnar/cuboidal epithelial cell | 6.93e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.89e-11 | 203 |
primitive nephron | 1.42e-08 | 7 |
renal glomerulus | 1.42e-08 | 7 |
renal corpuscle | 1.42e-08 | 7 |
glomerular capsule | 1.42e-08 | 7 |
metanephric mesenchyme | 1.42e-08 | 7 |
glomerular tuft | 1.42e-08 | 7 |
S-shaped body | 1.42e-08 | 7 |
renal vesicle | 1.42e-08 | 7 |
comma-shaped body | 1.42e-08 | 7 |
mesonephric epithelium | 1.94e-07 | 8 |
mesonephric tubule | 1.94e-07 | 8 |
nephric duct | 1.94e-07 | 8 |
renal duct | 1.94e-07 | 8 |
mesonephric duct | 1.94e-07 | 8 |
pronephric duct | 1.94e-07 | 8 |
urogenital ridge | 2.45e-07 | 11 |
vasculature | 3.10e-07 | 78 |
vascular system | 3.10e-07 | 78 |
vessel | 3.66e-07 | 68 |
splanchnic layer of lateral plate mesoderm | 8.61e-07 | 83 |