FFCP PHASE1:Hg19::chr7:158387919..158387949,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:158387919..158387949,+
|short_description=p@chr7:158387919..158387949,+
|description=CAGE_peak_at_chr7:158387919..158387949,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:158387919..158387949,+ | |||
|coexpression_cluster_id=C1149 | |||
|description=CAGE_peak_at_chr7:158387919..158387949,+ | |||
|id=chr7:158387919..158387949,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.66e-07;82 | |||
|ontology_enrichment_disease=DOID:162!6.00e-19!235;DOID:14566!9.29e-18!239;DOID:0050687!1.79e-12!143;DOID:0050686!3.32e-11!137;DOID:305!2.79e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.51e-09,235;DOID:14566,6.75e-09,239;DOID:0050687,7.02e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.45e-08!57;UBERON:0005068!4.45e-08!57;UBERON:0006241!4.45e-08!57;UBERON:0007135!4.45e-08!57;UBERON:0000073!1.53e-07!94;UBERON:0001016!1.53e-07!94;UBERON:0001017!3.44e-07!82;UBERON:0002780!9.32e-07!41;UBERON:0001890!9.32e-07!41;UBERON:0006240!9.32e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;4.31e-08;9!UBERON:0007245;4.31e-08;9!UBERON:0010009;4.31e-08;9!UBERON:0010011;4.31e-08;9!UBERON:0000454;4.31e-08;9!UBERON:0000125;5.16e-08;9!UBERON:0002308;5.16e-08;9!UBERON:0002780;1.37e-07;41!UBERON:0001890;1.37e-07;41!UBERON:0000073;4.10e-07;53!UBERON:0002616;4.10e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.20e-12,86;UBERON:0001049,1.86e-12,56;UBERON:0005068,1.86e-12,56;UBERON:0006241,1.86e-12,56;UBERON:0007135,1.86e-12,56;UBERON:0001016,1.34e-11,89;UBERON:0000073,1.84e-11,53;UBERON:0002616,1.84e-11,53;UBERON:0001017,5.35e-11,81;UBERON:0003075,1.33e-10,82;UBERON:0007284,1.33e-10,82;UBERON:0000955,7.57e-10,68;UBERON:0006238,7.57e-10,68;UBERON:0002780,1.23e-09,41;UBERON:0001890,1.23e-09,41;UBERON:0003080,1.23e-09,41;UBERON:0006240,1.23e-09,41;UBERON:0010371,6.85e-09,104;UBERON:0000125,4.41e-08,9;UBERON:0002308,4.41e-08,9;UBERON:0002420,4.58e-08,9;UBERON:0007245,4.58e-08,9;UBERON:0010009,4.58e-08,9;UBERON:0010011,4.58e-08,9;UBERON:0000454,4.58e-08,9;UBERON:0003528,8.18e-08,34;UBERON:0002020,8.18e-08,34;UBERON:0004121,4.46e-07,171;UBERON:0000924,4.46e-07,171;UBERON:0006601,4.46e-07,171 | |||
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| ||
|short_description=p@chr7:158387919..158387949,+ | |||
}} | }} |
Latest revision as of 08:05, 31 July 2015
Short description: | p@chr7:158387919..158387949, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:158387919..158387949, + |
Coexpression cluster: | C1149_skeletal_spinal_heart_medulla_globus_substantia_penis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.20e-12 | 86 |
neural tube | 1.86e-12 | 56 |
neural rod | 1.86e-12 | 56 |
future spinal cord | 1.86e-12 | 56 |
neural keel | 1.86e-12 | 56 |
nervous system | 1.34e-11 | 89 |
regional part of nervous system | 1.84e-11 | 53 |
regional part of brain | 1.84e-11 | 53 |
central nervous system | 5.35e-11 | 81 |
neural plate | 1.33e-10 | 82 |
presumptive neural plate | 1.33e-10 | 82 |
brain | 7.57e-10 | 68 |
future brain | 7.57e-10 | 68 |
regional part of forebrain | 1.23e-09 | 41 |
forebrain | 1.23e-09 | 41 |
anterior neural tube | 1.23e-09 | 41 |
future forebrain | 1.23e-09 | 41 |
ecto-epithelium | 6.85e-09 | 104 |
neural nucleus | 4.41e-08 | 9 |
nucleus of brain | 4.41e-08 | 9 |
basal ganglion | 4.58e-08 | 9 |
nuclear complex of neuraxis | 4.58e-08 | 9 |
aggregate regional part of brain | 4.58e-08 | 9 |
collection of basal ganglia | 4.58e-08 | 9 |
cerebral subcortex | 4.58e-08 | 9 |
brain grey matter | 8.18e-08 | 34 |
gray matter | 8.18e-08 | 34 |
ectoderm-derived structure | 4.46e-07 | 171 |
ectoderm | 4.46e-07 | 171 |
presumptive ectoderm | 4.46e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.51e-09 | 235 |
disease of cellular proliferation | 6.75e-09 | 239 |
cell type cancer | 7.02e-08 | 143 |