FFCP PHASE1:Hg19::chr7:156985019..156985030,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:156985019..156985030,+ to FFCP PHASE1:Hg19::chr7:156985019..156985030,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000429552_5end | |||
|cluster_id=chr7:156985019..156985030,+ | |||
|coexpression_cluster_id=C4009 | |||
|description=CAGE_peak_1_at_ENST00000429552_5end | |||
|id=chr7:156985019..156985030,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.66e-19!53;CL:0000051!2.66e-19!53;CL:0000838!9.17e-19!52;CL:0002087!1.20e-18!119;CL:0002031!4.84e-17!124;CL:0000037!4.13e-16!172;CL:0000566!4.13e-16!172;CL:0000738!2.30e-15!140;CL:0002032!5.58e-15!165;CL:0000837!5.58e-15!165;CL:0000988!6.27e-14!182;CL:0000003!2.66e-13!722;CL:0000012!7.49e-10!682;CL:0000791!9.67e-10!18;CL:0000789!9.67e-10!18;CL:0002420!9.67e-10!18;CL:0002419!9.67e-10!18;CL:0000790!9.67e-10!18;CL:0000945!1.18e-09!24;CL:0000826!1.18e-09!24;CL:0000084!2.73e-09!25;CL:0000827!2.73e-09!25;CL:0000548!8.19e-09!679;CL:0000004!8.19e-09!679;CL:0000255!8.19e-09!679;CL:0000236!1.67e-08!14;CL:0000860!2.93e-07!45;CL:0000625!5.23e-07!11;CL:0002057!7.06e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000542;5.08e-12;53!CL:0000791;9.55e-10;18!CL:0000789;9.55e-10;18!CL:0002419;9.55e-10;18!CL:0000945;1.18e-09;24!CL:0000084;2.65e-09;25!CL:0000236;2.33e-08;13!CL:0002087;3.22e-07;104!CL:0000625;5.20e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.66e-19,53;CL:0000051,2.66e-19,53;CL:0000838,9.17e-19,52;CL:0002087,1.18e-18,115;CL:0002031,5.18e-17,120;CL:0000037,5.48e-16,168;CL:0000738,2.77e-15,136;CL:0002032,7.36e-15,161;CL:0000837,7.36e-15,161;CL:0000988,3.51e-14,177;CL:0000791,9.67e-10,18;CL:0000789,9.67e-10,18;CL:0002420,9.67e-10,18;CL:0002419,9.67e-10,18;CL:0000790,9.67e-10,18;CL:0000945,1.18e-09,24;CL:0000826,1.18e-09,24;CL:0000084,2.73e-09,25;CL:0000827,2.73e-09,25;CL:0000236,1.67e-08,14;CL:0000625,5.23e-07,11;CL:0000860,7.06e-07,42;CL:0002057,7.06e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000051;5.08e-12;53!CL:0000790;9.55e-10;18 | |||
|ontology_enrichment_disease=DOID:14566!1.38e-13!239;DOID:162!2.74e-13!235;DOID:0050687!2.07e-10!143;DOID:305!4.32e-09!106;DOID:0050686!3.76e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.38e-13,239;DOID:162,2.74e-13,235;DOID:0050687,2.07e-10,143;DOID:305,4.32e-09,106;DOID:0050686,3.76e-08,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ENST00000429552 | |||
}} | }} |
Latest revision as of 07:59, 31 July 2015
Short description: | p1@ENST00000429552 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000429552_5end |
Coexpression cluster: | C4009_CD4_CD133_CD8_CD19_choriocarcinoma_Retinal_CD34 |
Association with transcript: | -31bp_to_ENST00000429552_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.66e-19 | 53 |
common lymphoid progenitor | 2.66e-19 | 53 |
lymphoid lineage restricted progenitor cell | 9.17e-19 | 52 |
nongranular leukocyte | 1.18e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 5.18e-17 | 120 |
hematopoietic stem cell | 5.48e-16 | 168 |
leukocyte | 2.77e-15 | 136 |
hematopoietic oligopotent progenitor cell | 7.36e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.36e-15 | 161 |
hematopoietic cell | 3.51e-14 | 177 |
mature alpha-beta T cell | 9.67e-10 | 18 |
alpha-beta T cell | 9.67e-10 | 18 |
immature T cell | 9.67e-10 | 18 |
mature T cell | 9.67e-10 | 18 |
immature alpha-beta T cell | 9.67e-10 | 18 |
lymphocyte of B lineage | 1.18e-09 | 24 |
pro-B cell | 1.18e-09 | 24 |
T cell | 2.73e-09 | 25 |
pro-T cell | 2.73e-09 | 25 |
B cell | 1.67e-08 | 14 |
CD8-positive, alpha-beta T cell | 5.23e-07 | 11 |
classical monocyte | 7.06e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.06e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.38e-13 | 239 |
cancer | 2.74e-13 | 235 |
cell type cancer | 2.07e-10 | 143 |
carcinoma | 4.32e-09 | 106 |
organ system cancer | 3.76e-08 | 137 |