FFCP PHASE1:Hg19::chr7:139661798..139661815,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:139661798..139661815,+ | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_at_chr7:139661798..139661815,+ | |description=CAGE_peak_at_chr7:139661798..139661815,+ | ||
|id=chr7:139661798..139661815,+ | |id=chr7:139661798..139661815,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.35e-64!42;CL:0000766!9.32e-64!76;CL:0002194!3.03e-63!63;CL:0000576!3.03e-63!63;CL:0000040!3.03e-63!63;CL:0000559!3.03e-63!63;CL:0000839!5.09e-61!70;CL:0002009!6.64e-61!65;CL:0000557!5.69e-60!71;CL:0000860!1.63e-59!45;CL:0000763!4.30e-50!112;CL:0000049!4.30e-50!112;CL:0002087!3.02e-40!119;CL:0000738!3.41e-40!140;CL:0000037!4.31e-38!172;CL:0000566!4.31e-38!172;CL:0000988!2.25e-36!182;CL:0002031!2.55e-36!124;CL:0002032!6.74e-36!165;CL:0000837!6.74e-36!165;CL:0002393!1.26e-15!9;CL:0002397!1.26e-15!9;CL:0000134!2.93e-10!358;CL:0002320!9.22e-10!365;CL:0000219!4.98e-08!390;CL:0000875!5.58e-08!3;CL:0002396!5.58e-08!3;CL:0002619!1.85e-07!3;CL:0000842!6.61e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.35e-64!42;CL:0000766!9.32e-64!76;CL:0002194!3.03e-63!63;CL:0000576!3.03e-63!63;CL:0000040!3.03e-63!63;CL:0000559!3.03e-63!63;CL:0000839!5.09e-61!70;CL:0002009!6.64e-61!65;CL:0000557!5.69e-60!71;CL:0000860!1.63e-59!45;CL:0000763!4.30e-50!112;CL:0000049!4.30e-50!112;CL:0002087!3.02e-40!119;CL:0000738!3.41e-40!140;CL:0000037!4.31e-38!172;CL:0000566!4.31e-38!172;CL:0000988!2.25e-36!182;CL:0002031!2.55e-36!124;CL:0002032!6.74e-36!165;CL:0000837!6.74e-36!165;CL:0002393!1.26e-15!9;CL:0002397!1.26e-15!9;CL:0000134!2.93e-10!358;CL:0002320!9.22e-10!365;CL:0000219!4.98e-08!390;CL:0000875!5.58e-08!3;CL:0002396!5.58e-08!3;CL:0002619!1.85e-07!3;CL:0000842!6.61e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.76e-59;33!CL:0002057;1.76e-59;33!CL:0000473;4.13e-55;39!CL:0000234;4.13e-55;39!CL:0000576;1.39e-46;48!CL:0000766;2.98e-33;69!CL:0000763;6.29e-18;100!CL:0000738;6.86e-13;136!CL:0000235;1.16e-12;6!CL:0000775;8.36e-12;3!CL:0002087;6.35e-10;104!CL:0000988;6.17e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.29e-77,48;CL:0000234,6.29e-77,48;CL:0002194,1.20e-66,59;CL:0000576,1.20e-66,59;CL:0000040,1.20e-66,59;CL:0000559,1.20e-66,59;CL:0000860,1.90e-65,42;CL:0002057,1.90e-65,42;CL:0000766,1.06e-64,72;CL:0002009,2.19e-64,61;CL:0000839,2.52e-59,66;CL:0000557,2.11e-58,67;CL:0000763,3.59e-42,108;CL:0000049,3.59e-42,108;CL:0000738,8.11e-33,136;CL:0002087,8.80e-33,115;CL:0002031,2.80e-31,120;CL:0002032,3.44e-27,161;CL:0000837,3.44e-27,161;CL:0000037,6.55e-26,168;CL:0000988,2.06e-24,177;CL:0000235,1.60e-12,6;CL:0000775,6.73e-12,3;CL:0000134,2.56e-10,354;CL:0002320,4.84e-10,361;CL:0000219,4.58e-09,386;CL:0000048,7.22e-08,427;CL:0000723,1.06e-07,433;CL:0000034,1.73e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.72e-48;42!CL:0000049;3.42e-18;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.12e-56!102;UBERON:0003061!5.12e-56!102;UBERON:0002193!7.82e-52!112;UBERON:0002371!1.05e-51!80;UBERON:0001474!3.75e-47!86;UBERON:0004765!6.42e-40!101;UBERON:0001434!6.42e-40!101;UBERON:0002405!4.11e-35!115;UBERON:0003081!4.41e-21!216;UBERON:0002204!9.26e-20!167;UBERON:0002384!4.36e-09!375;UBERON:0000178!7.53e-08!15;UBERON:0000179!7.53e-08!15;UBERON:0000463!7.53e-08!15 | |ontology_enrichment_uberon=UBERON:0002390!5.12e-56!102;UBERON:0003061!5.12e-56!102;UBERON:0002193!7.82e-52!112;UBERON:0002371!1.05e-51!80;UBERON:0001474!3.75e-47!86;UBERON:0004765!6.42e-40!101;UBERON:0001434!6.42e-40!101;UBERON:0002405!4.11e-35!115;UBERON:0003081!4.41e-21!216;UBERON:0002204!9.26e-20!167;UBERON:0002384!4.36e-09!375;UBERON:0000178!7.53e-08!15;UBERON:0000179!7.53e-08!15;UBERON:0000463!7.53e-08!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.58e-51,76;UBERON:0001474,3.20e-47,82;UBERON:0004765,9.20e-43,90;UBERON:0002405,2.76e-41,93;UBERON:0002390,5.06e-39,98;UBERON:0003061,5.06e-39,98;UBERON:0001434,3.52e-38,100;UBERON:0002193,4.07e-35,108;UBERON:0002204,1.65e-21,167;UBERON:0003081,4.67e-17,203;UBERON:0002384,1.15e-09,371;UBERON:0000926,1.20e-09,315;UBERON:0004120,1.20e-09,315;UBERON:0006603,1.20e-09,315 | |||
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| ||
|short_description=p@chr7:139661798..139661815,+ | |short_description=p@chr7:139661798..139661815,+ | ||
}} | }} |
Latest revision as of 06:39, 31 July 2015
Short description: | p@chr7:139661798..139661815, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:139661798..139661815, + |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.29e-77 | 48 |
phagocyte | 6.29e-77 | 48 |
monopoietic cell | 1.20e-66 | 59 |
monocyte | 1.20e-66 | 59 |
monoblast | 1.20e-66 | 59 |
promonocyte | 1.20e-66 | 59 |
classical monocyte | 1.90e-65 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.90e-65 | 42 |
myeloid leukocyte | 1.06e-64 | 72 |
macrophage dendritic cell progenitor | 2.19e-64 | 61 |
myeloid lineage restricted progenitor cell | 2.52e-59 | 66 |
granulocyte monocyte progenitor cell | 2.11e-58 | 67 |
myeloid cell | 3.59e-42 | 108 |
common myeloid progenitor | 3.59e-42 | 108 |
leukocyte | 8.11e-33 | 136 |
nongranular leukocyte | 8.80e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 2.80e-31 | 120 |
hematopoietic oligopotent progenitor cell | 3.44e-27 | 161 |
hematopoietic multipotent progenitor cell | 3.44e-27 | 161 |
hematopoietic stem cell | 6.55e-26 | 168 |
hematopoietic cell | 2.06e-24 | 177 |
macrophage | 1.60e-12 | 6 |
neutrophil | 6.73e-12 | 3 |
mesenchymal cell | 2.56e-10 | 354 |
connective tissue cell | 4.84e-10 | 361 |
motile cell | 4.58e-09 | 386 |
multi fate stem cell | 7.22e-08 | 427 |
somatic stem cell | 1.06e-07 | 433 |
stem cell | 1.73e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.58e-51 | 76 |
bone element | 3.20e-47 | 82 |
skeletal element | 9.20e-43 | 90 |
immune system | 2.76e-41 | 93 |
hematopoietic system | 5.06e-39 | 98 |
blood island | 5.06e-39 | 98 |
skeletal system | 3.52e-38 | 100 |
hemolymphoid system | 4.07e-35 | 108 |
musculoskeletal system | 1.65e-21 | 167 |
lateral plate mesoderm | 4.67e-17 | 203 |
connective tissue | 1.15e-09 | 371 |
mesoderm | 1.20e-09 | 315 |
mesoderm-derived structure | 1.20e-09 | 315 |
presumptive mesoderm | 1.20e-09 | 315 |