FFCP PHASE1:Hg19::chr7:1327587..1327610,+: Difference between revisions
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|id=chr7:1327587..1327610,+
|short_description=p@chr7:1327587..1327610,+
|description=CAGE_peak_at_chr7:1327587..1327610,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:1327587..1327610,+ | |||
|coexpression_cluster_id=C347 | |||
|description=CAGE_peak_at_chr7:1327587..1327610,+ | |||
|id=chr7:1327587..1327610,+ | |||
|ontology_enrichment_celltype=CL:0000242!3.19e-45!2;CL:0000312!8.66e-19!5;CL:0000035!4.26e-18!20;CL:0000240!7.79e-16!6;CL:0000311!7.79e-16!6;CL:0000079!7.79e-16!6;CL:0000237!7.79e-16!6;CL:0000036!7.79e-16!6;CL:0000357!7.79e-16!6;CL:0000114!7.79e-16!6;CL:0000815!2.07e-12!2;CL:0000792!2.07e-12!2;CL:0002677!2.07e-12!2;CL:0000362!3.95e-12!8;CL:0000095!3.67e-11!17;CL:0000123!3.67e-11!17;CL:0000898!1.04e-08!3;CL:0000594!1.21e-08!3;CL:0002603!1.30e-08!3;CL:0002319!4.88e-08!25;CL:0002159!8.03e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.75e-130;2!CL:0000242;1.75e-130;2!CL:0000312;3.74e-53;5!CL:0000240;1.52e-44;6!CL:0000311;1.52e-44;6!CL:0000079;1.52e-44;6!CL:0000237;1.52e-44;6!CL:0000362;3.59e-30;9!CL:0002159;7.13e-20;14!CL:0000095;5.66e-15;17!CL:0002319;6.90e-11;25!CL:0002077;1.30e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.75e-130,2;CL:0000312,3.74e-53,5;CL:0000240,1.52e-44,6;CL:0000311,1.52e-44,6;CL:0000079,1.52e-44,6;CL:0000237,1.52e-44,6;CL:0000036,1.52e-44,6;CL:0000357,1.52e-44,6;CL:0000114,1.52e-44,6;CL:0000362,3.59e-30,9;CL:0002159,7.13e-20,14;CL:0000095,5.66e-15,17;CL:0000123,5.66e-15,17;CL:0002319,6.90e-11,25;CL:0002077,7.08e-09,34;CL:0000333,3.05e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000357;1.52e-44;6!CL:0000114;1.52e-44;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!5.64e-17!12;UBERON:0002028!5.64e-17!12;UBERON:0007277!5.64e-17!12;UBERON:0004732!9.98e-16!13;UBERON:0002037!1.63e-15!6;UBERON:0006215!1.63e-15!6;UBERON:0003076!9.99e-14!15;UBERON:0003057!9.99e-14!15;UBERON:0002680!1.12e-10!9;UBERON:0001895!1.12e-10!9;UBERON:0010092!1.12e-10!9;UBERON:0001896!1.51e-08!3;UBERON:0005290!1.51e-08!3;UBERON:0010096!1.51e-08!3;UBERON:0001003!2.52e-07!14;UBERON:0007376!2.52e-07!14;UBERON:0007383!2.52e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.24e-18;15!UBERON:0007376;1.24e-18;15!UBERON:0010371;2.91e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.24e-18,15;UBERON:0007376,1.24e-18,15;UBERON:0007383,1.24e-18,15;UBERON:0002097,1.52e-07,41;UBERON:0002199,7.74e-07,46;UBERON:0002416,7.74e-07,46 | |||
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|short_description=p@chr7:1327587..1327610,+ | |||
}} | }} |
Latest revision as of 06:13, 31 July 2015
Short description: | p@chr7:1327587..1327610, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:1327587..1327610, + |
Coexpression cluster: | C347_carcinoid_retinoblastoma_neuroblastoma_Mast_Smooth_parietal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.75e-130 | 2 |
keratinocyte | 3.74e-53 | 5 |
stratified squamous epithelial cell | 1.52e-44 | 6 |
keratin accumulating cell | 1.52e-44 | 6 |
stratified epithelial cell | 1.52e-44 | 6 |
keratinizing barrier epithelial cell | 1.52e-44 | 6 |
epithelial fate stem cell | 1.52e-44 | 6 |
stratified epithelial stem cell | 1.52e-44 | 6 |
surface ectodermal cell | 1.52e-44 | 6 |
epidermal cell | 3.59e-30 | 9 |
general ecto-epithelial cell | 7.13e-20 | 14 |
neuron associated cell | 5.66e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 5.66e-15 | 17 |
neural cell | 6.90e-11 | 25 |
ecto-epithelial cell | 7.08e-09 | 34 |
migratory neural crest cell | 3.05e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.24e-18 | 15 |
outer epithelium | 1.24e-18 | 15 |
enveloping layer of ectoderm | 1.24e-18 | 15 |
skin of body | 1.52e-07 | 41 |
integument | 7.74e-07 | 46 |
integumental system | 7.74e-07 | 46 |