FFCP PHASE1:Hg19::chr7:130598243..130598256,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:130598243..130598256,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr7:130598243..130598256,+ | |description=CAGE_peak_at_chr7:130598243..130598256,+ | ||
|id=chr7:130598243..130598256,+ | |id=chr7:130598243..130598256,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.63e-19!42;CL:0000860!9.69e-18!45;CL:0000766!6.42e-11!76;CL:0002194!7.83e-11!63;CL:0000576!7.83e-11!63;CL:0000040!7.83e-11!63;CL:0000559!7.83e-11!63;CL:0002009!5.13e-10!65;CL:0000839!6.36e-10!70;CL:0000557!1.47e-09!71;CL:0000012!2.31e-07!682;CL:0000548!2.40e-07!679;CL:0000004!2.40e-07!679;CL:0000255!2.40e-07!679 | |ontology_enrichment_celltype=CL:0002057!8.63e-19!42;CL:0000860!9.69e-18!45;CL:0000766!6.42e-11!76;CL:0002194!7.83e-11!63;CL:0000576!7.83e-11!63;CL:0000040!7.83e-11!63;CL:0000559!7.83e-11!63;CL:0002009!5.13e-10!65;CL:0000839!6.36e-10!70;CL:0000557!1.47e-09!71;CL:0000012!2.31e-07!682;CL:0000548!2.40e-07!679;CL:0000004!2.40e-07!679;CL:0000255!2.40e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.39e-37;33!CL:0002057;1.39e-37;33!CL:0000473;2.01e-26;39!CL:0000234;2.01e-26;39!CL:0000576;4.31e-17;48!CL:0000766;1.08e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.09e-31,42;CL:0002057,1.09e-31,42;CL:0000473,6.66e-27,48;CL:0000234,6.66e-27,48;CL:0002194,3.18e-20,59;CL:0000576,3.18e-20,59;CL:0000040,3.18e-20,59;CL:0000559,3.18e-20,59;CL:0002009,2.30e-19,61;CL:0000766,6.30e-19,72;CL:0000839,1.91e-17,66;CL:0000557,4.26e-17,67;CL:0000763,1.75e-10,108;CL:0000049,1.75e-10,108;CL:0002087,1.37e-07,115;CL:0000738,4.25e-07,136;CL:0002031,4.70e-07,120;CL:0002602,9.83e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;4.69e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.60e-09;3!DOID:127;5.60e-09;3!DOID:0060072;7.96e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.40e-09,3;DOID:127,2.40e-09,3;DOID:0060072,4.26e-07,4;DOID:4468,8.76e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002204!3.89e-11!167;UBERON:0002371!5.36e-10!80;UBERON:0001474!1.83e-09!86;UBERON:0004765!2.69e-09!101;UBERON:0001434!2.69e-09!101;UBERON:0002405!2.73e-07!115 | |ontology_enrichment_uberon=UBERON:0002204!3.89e-11!167;UBERON:0002371!5.36e-10!80;UBERON:0001474!1.83e-09!86;UBERON:0004765!2.69e-09!101;UBERON:0001434!2.69e-09!101;UBERON:0002405!2.73e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0003891;5.84e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,2.58e-19,90;UBERON:0002371,6.61e-19,76;UBERON:0001474,5.01e-17,82;UBERON:0001434,1.26e-16,100;UBERON:0002405,3.21e-14,93;UBERON:0002204,9.88e-14,167;UBERON:0002390,3.71e-13,98;UBERON:0003061,3.71e-13,98;UBERON:0002193,2.47e-11,108;UBERON:0003891,2.01e-10,4;UBERON:0006444,9.83e-07,2;UBERON:0001995,9.83e-07,2;UBERON:0004715,9.83e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0.527533956456907,1.48519623552056,2.65117900582333,0,1.20538905604795,0,0,0.61560529038394,0,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0,0,0.0774672005803016,0,0,0,0.601633342410425,0.651032612147555,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0.727752183563449,1.39457422143411,0.822335776043652,2.16794459626573,7.19230980805376,8.45330331546032,5.67557351732605,12.0660988257816,4.51839278508678,5.41705946377367,0.941211697713023,1.09162460023138,0,9.79468455586888,2.56743221660875,6.39337125799041,1.64925650093358,1.59570926097305,2.13112375266347,1.7412554317715,0.56738522469114,2.4912889959823,10.0499466102697,5.73631210262222,4.77815458351257,2.42159801053347,1.84138817993782,1.26584954976354,0.211255286311942,0.850417199860174,0.419317291016752,0.336985893439485,0.150176892841506,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0.12663051166458,2.51577443545116,0.573673241497627,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0.70296429550139,0.624320153660641,0,0.298897361103602,0.587172493218824,0.647491777472526,0,0.816616685019573,0.982674538494144,0.619954687054593,0,0,0,0,0.505008341862199,0.375355559615893,0.554128230968366,0,0.612975591598039,0,0.226864366320042,1.07633781413317,0.85422955527427,0.211931901159562,0,0.515262646192195,0.257640540045629,0.18611685633159,0.675105328965065,0.389748020644795,0.504867548488229,0.460249493211497,0.161646056818812,1.06502877754984,0.503760491138201,0.169560592310488,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,1.44375896333917,0.118306800039844,0.168584690078102,0,0.220587945464788,0.217879444092406,0.237270619111097,0.539325232640658,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0.514703430895577,0,1.1240175325762,0,0.185176890317059,1.3032332212413,1.03993478527958,0,0,0,0.144366447761074,0.462985512576611,0.761016608938393,0,0,0,0.702012795417713,0.148631162288728,0,0,0,0,0.290633938513962,0,0,0,0.414656231081544,0.144119953416961,0.37872730027914,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0,0.285826432630578,0,0.87192013766656,0.22001485746285,0,0,0,0.26593811658487,0,1.02882949704857,1.41849132023278,1.8649552531127,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,0,1.30303176000821,0.205476322550383,0.179060963239896,0,0.197030760201927,0.215627574859517,0,0,0,0.773288812777695,0.167516265334349,0,0.749007023947182,0,4.14415513436035,0.49076596687656,1.50051156317903,0.813795071099207,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0.184369168541703,0.260650843404249,1.17480694477644,0.343143423810856,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.246381468041427,0,0.116210378459959,0.604297247958111,0.200506470303285,0.184161977871793,0.34444334449382,1.0925470080403,0.262248829918848,0.451199612907412,0.924184045252977,0,0,0.949964660035881,0,0.510281115829547,0.215915916102139,0,1.35473218771926,1.00337954770971,2.80363900349542,2.49322802678617,0.671624264166535,0,0,0,0.328014645699706,0,0.412164046590889,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0.307007349452259,0.551346289938122,0.751941714077915,0.435050081742686,0.255679882248303,0.0890320356467374,0.330569830721956,0,0.638063562472921,0,0.929691098594572,1.5740617341532,0,0,0.532306030317022,0.869932992075073,0.74129687641568,0.429374660225974,0,1.2655176988749,0,1.27948895655667,0,0,0,0.179872457583315,0,0.235624804691373,0.808729926293264,4.75530963519025,0,0,0,0,0.682499557039929,0.141405431953713,0,0.551365343546124,0.66343897524122,0.876901770507525,1.73632660280006,0,0,0,0.563391205064483,0.143411352204052,0,0,1.06428319221179,0.211107635297664,0,0,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0.459446800413919,0,0,0,0,0,0.648473311192717,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.748562161632879,0,0.121360521749513,0,0,0.47748896947538,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0.552567831062295,0,0.20453736500431,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0,0,3.54296554325536,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,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| ||
|short_description=p@chr7:130598243..130598256,+ | |short_description=p@chr7:130598243..130598256,+ | ||
}} | }} |
Latest revision as of 06:03, 31 July 2015
Short description: | p@chr7:130598243..130598256, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:130598243..130598256, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.09e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.09e-31 | 42 |
defensive cell | 6.66e-27 | 48 |
phagocyte | 6.66e-27 | 48 |
monopoietic cell | 3.18e-20 | 59 |
monocyte | 3.18e-20 | 59 |
monoblast | 3.18e-20 | 59 |
promonocyte | 3.18e-20 | 59 |
macrophage dendritic cell progenitor | 2.30e-19 | 61 |
myeloid leukocyte | 6.30e-19 | 72 |
myeloid lineage restricted progenitor cell | 1.91e-17 | 66 |
granulocyte monocyte progenitor cell | 4.26e-17 | 67 |
myeloid cell | 1.75e-10 | 108 |
common myeloid progenitor | 1.75e-10 | 108 |
nongranular leukocyte | 1.37e-07 | 115 |
leukocyte | 4.25e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 4.70e-07 | 120 |
annulus pulposus cell | 9.83e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 2.58e-19 | 90 |
bone marrow | 6.61e-19 | 76 |
bone element | 5.01e-17 | 82 |
skeletal system | 1.26e-16 | 100 |
immune system | 3.21e-14 | 93 |
musculoskeletal system | 9.88e-14 | 167 |
hematopoietic system | 3.71e-13 | 98 |
blood island | 3.71e-13 | 98 |
hemolymphoid system | 2.47e-11 | 108 |
stroma | 2.01e-10 | 4 |
annulus fibrosus | 9.83e-07 | 2 |
fibrocartilage | 9.83e-07 | 2 |
annulus fibrosus disci intervertebralis | 9.83e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.40e-09 | 3 |
leiomyoma | 2.40e-09 | 3 |
benign neoplasm | 4.26e-07 | 4 |
clear cell adenocarcinoma | 8.76e-07 | 2 |