FFCP PHASE1:Hg19::chr7:100782236..100782279,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:100782236..100782279,+ to FFCP PHASE1:Hg19::chr7:100782236..100782279,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:100782236..100782279,+ | |||
|coexpression_cluster_id=C4633 | |||
|description=CAGE_peak_at_chr7:100782236..100782279,+ | |||
|id=chr7:100782236..100782279,+ | |||
|ontology_enrichment_celltype=CL:0000222!5.28e-31!119;CL:0000055!5.25e-25!180;CL:0000680!1.86e-22!57;CL:0000056!1.86e-22!57;CL:0000355!1.86e-22!57;CL:0000183!3.68e-22!59;CL:0000187!7.96e-21!54;CL:0000192!2.23e-19!42;CL:0000514!2.23e-19!42;CL:0000359!3.16e-19!32;CL:0000220!9.56e-19!246;CL:0002321!3.14e-18!248;CL:0000393!9.30e-17!60;CL:0000211!9.30e-17!60;CL:0000144!1.13e-15!625;CL:0002371!1.14e-14!591;CL:0000548!8.69e-12!679;CL:0000004!8.69e-12!679;CL:0000255!8.69e-12!679;CL:0000012!2.37e-11!682;CL:0000057!5.43e-11!75;CL:0000213!2.09e-10!57;CL:0000215!2.09e-10!57;CL:0002139!2.10e-10!24;CL:0002494!9.76e-10!16;CL:0002539!1.34e-08!10;CL:0000115!5.49e-08!35;CL:0000048!8.85e-08!430;CL:0000723!9.89e-08!436;CL:0002078!2.83e-07!44;CL:0000071!3.16e-07!18;CL:0002546!3.16e-07!18;CL:1000413!8.00e-07!9;CL:0000034!8.27e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.88e-24;32!CL:0000192;1.42e-13;43!CL:0002139;6.85e-13;24!CL:0002539;2.70e-12;10!CL:0000115;1.99e-10;36!CL:0000071;8.49e-10;18!CL:0000187;1.34e-09;55!CL:0002494;4.59e-08;16!CL:1000413;1.17e-07;9!CL:0000393;2.93e-07;61!CL:0000211;2.93e-07;61!CL:0000213;3.87e-07;58!CL:0000215;3.87e-07;58!CL:0002594;4.13e-07;4!CL:0002078;4.42e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.09e-32,121;CL:0000359,1.23e-26,32;CL:0000680,9.47e-21,58;CL:0000056,9.47e-21,58;CL:0000355,9.47e-21,58;CL:0000192,4.68e-19,43;CL:0000514,4.68e-19,43;CL:0000187,3.24e-18,55;CL:0000393,1.69e-15,61;CL:0000211,1.69e-15,61;CL:0002321,7.31e-13,250;CL:0002139,9.51e-13,24;CL:0002539,1.55e-12,10;CL:0000213,1.11e-11,58;CL:0000215,1.11e-11,58;CL:0000115,1.30e-11,36;CL:0002078,2.61e-10,45;CL:0000071,1.01e-09,18;CL:0002546,1.01e-09,18;CL:0002494,5.67e-08,16;CL:1000413,8.45e-08,9;CL:0002594,2.43e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;1.42e-13;43!CL:0000355;8.24e-11;58!CL:0002546;8.49e-10;18!CL:0000222;3.02e-08;121 | |||
|ontology_enrichment_disease=DOID:2394!5.04e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.97e-16;14!DOID:193;3.56e-07;29!DOID:120;7.44e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.00e-16,14;DOID:193,4.45e-07,29;DOID:120,8.93e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002049!3.39e-29!79;UBERON:0007798!3.39e-29!79;UBERON:0000055!3.05e-26!69;UBERON:0004535!1.40e-25!110;UBERON:0004872!2.47e-25!84;UBERON:0001009!2.55e-25!113;UBERON:0001637!5.85e-24!42;UBERON:0003509!5.85e-24!42;UBERON:0004572!5.85e-24!42;UBERON:0003914!1.06e-23!118;UBERON:0001981!1.07e-23!60;UBERON:0007500!1.07e-23!60;UBERON:0004537!1.07e-23!60;UBERON:0006965!1.07e-23!60;UBERON:0004290!1.94e-20!70;UBERON:0000486!2.84e-20!82;UBERON:0001134!2.98e-20!61;UBERON:0002036!2.98e-20!61;UBERON:0003082!2.98e-20!61;UBERON:0004573!1.96e-19!33;UBERON:0004571!1.96e-19!33;UBERON:0000490!2.36e-19!138;UBERON:0002385!6.24e-19!63;UBERON:0001015!6.24e-19!63;UBERON:0000383!6.24e-19!63;UBERON:0000914!2.78e-18!83;UBERON:0002329!2.78e-18!83;UBERON:0003077!2.78e-18!83;UBERON:0003059!2.78e-18!83;UBERON:0007282!2.78e-18!83;UBERON:0009618!2.78e-18!83;UBERON:0007285!2.78e-18!83;UBERON:0005256!2.30e-15!143;UBERON:0000947!7.72e-13!21;UBERON:0010191!7.72e-13!21;UBERON:0002100!1.51e-11!216;UBERON:0000119!2.24e-09!312;UBERON:0000483!2.97e-09!309;UBERON:0000926!1.26e-08!448;UBERON:0004120!1.26e-08!448;UBERON:0006603!1.26e-08!448;UBERON:0004237!1.34e-08!10;UBERON:0004695!1.34e-08!10;UBERON:0002111!1.34e-08!10;UBERON:0004178!1.34e-08!10;UBERON:0000477!3.59e-08!286;UBERON:0004111!5.09e-08!241;UBERON:0000487!5.64e-08!22;UBERON:0006914!6.81e-08!25;UBERON:0000467!7.86e-08!625;UBERON:0000468!7.92e-08!659;UBERON:0000480!1.03e-07!626;UBERON:0001135!1.90e-07!15;UBERON:0000025!2.70e-07!194;UBERON:0001986!3.16e-07!18;UBERON:0004638!3.16e-07!18;UBERON:0004852!3.16e-07!18;UBERON:0003104!3.19e-07!238;UBERON:0009142!3.19e-07!238;UBERON:0000948!3.54e-07!24;UBERON:0005498!3.54e-07!24;UBERON:0004140!3.54e-07!24;UBERON:0009881!3.54e-07!24;UBERON:0004141!3.54e-07!24;UBERON:0003084!3.54e-07!24;UBERON:0007005!3.54e-07!24;UBERON:0004139!3.54e-07!24;UBERON:0004291!3.54e-07!24;UBERON:0000475!4.68e-07!365;UBERON:0007100!7.81e-07!27;UBERON:0003915!8.00e-07!9;UBERON:0004700!8.00e-07!9;UBERON:0001917!8.00e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.40e-26;42!UBERON:0003509;4.40e-26;42!UBERON:0004572;4.40e-26;42!UBERON:0004573;1.30e-24;33!UBERON:0004571;1.30e-24;33!UBERON:0007500;1.30e-18;56!UBERON:0001981;1.30e-18;56!UBERON:0004537;1.30e-18;56!UBERON:0000055;2.38e-17;65!UBERON:0002049;4.67e-16;75!UBERON:0007798;4.67e-16;75!UBERON:0000947;5.91e-16;21!UBERON:0010191;5.91e-16;21!UBERON:0003914;2.72e-14;74!UBERON:0004237;2.70e-12;10!UBERON:0004695;2.70e-12;10!UBERON:0002111;2.70e-12;10!UBERON:0004178;2.70e-12;10!UBERON:0004638;8.49e-10;18!UBERON:0001986;8.49e-10;18!UBERON:0004852;8.49e-10;18!UBERON:0000487;4.08e-09;22!UBERON:0002118;4.08e-08;5!UBERON:0001009;4.49e-08;112!UBERON:0000992;7.74e-08;13!UBERON:0003915;1.17e-07;9!UBERON:0004700;1.17e-07;9!UBERON:0001917;1.17e-07;9!UBERON:0006914;1.26e-07;25!UBERON:0000025;1.54e-07;93!UBERON:0001135;1.84e-07;15!UBERON:0001310;4.13e-07;4 | |||
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| ||
|short_description=p@chr7:100782236..100782279,+ | |||
}} | }} |
Latest revision as of 04:18, 31 July 2015
Short description: | p@chr7:100782236..100782279, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:100782236..100782279, + |
Coexpression cluster: | C4633_hepatic_spindle_chorionic_bone_Smooth_Fibroblast_basal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.09e-32 | 121 |
vascular associated smooth muscle cell | 1.23e-26 | 32 |
muscle precursor cell | 9.47e-21 | 58 |
myoblast | 9.47e-21 | 58 |
multi-potent skeletal muscle stem cell | 9.47e-21 | 58 |
smooth muscle cell | 4.68e-19 | 43 |
smooth muscle myoblast | 4.68e-19 | 43 |
muscle cell | 3.24e-18 | 55 |
electrically responsive cell | 1.69e-15 | 61 |
electrically active cell | 1.69e-15 | 61 |
embryonic cell | 7.31e-13 | 250 |
endothelial cell of vascular tree | 9.51e-13 | 24 |
aortic smooth muscle cell | 1.55e-12 | 10 |
lining cell | 1.11e-11 | 58 |
barrier cell | 1.11e-11 | 58 |
endothelial cell | 1.30e-11 | 36 |
meso-epithelial cell | 2.61e-10 | 45 |
blood vessel endothelial cell | 1.01e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.01e-09 | 18 |
cardiocyte | 5.67e-08 | 16 |
endothelial cell of artery | 8.45e-08 | 9 |
smooth muscle cell of the umbilical artery | 2.43e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.00e-16 | 14 |
reproductive organ cancer | 4.45e-07 | 29 |
female reproductive organ cancer | 8.93e-07 | 27 |