FFCP PHASE1:Hg19::chr7:100781561..100781583,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:100781561..100781583,+ | |||
|coexpression_cluster_id=C4633 | |||
|description=CAGE_peak_at_chr7:100781561..100781583,+ | |description=CAGE_peak_at_chr7:100781561..100781583,+ | ||
|id=chr7:100781561..100781583,+ | |id=chr7:100781561..100781583,+ | ||
|ontology_enrichment_celltype=CL:0000222!1.92e-29!119;CL:0000055!2.09e-22!180;CL:0000680!3.45e-19!57;CL:0000056!3.45e-19!57;CL:0000355!3.45e-19!57;CL:0000144!4.55e-19!625;CL:0000359!1.63e-18!32;CL:0000192!5.03e-18!42;CL:0000514!5.03e-18!42;CL:0000187!1.22e-17!54;CL:0000183!1.40e-17!59;CL:0000220!3.62e-17!246;CL:0002371!7.00e-17!591;CL:0002321!9.90e-17!248;CL:0000393!2.54e-14!60;CL:0000211!2.54e-14!60;CL:0000548!5.93e-14!679;CL:0000004!5.93e-14!679;CL:0000255!5.93e-14!679;CL:0000012!1.47e-13!682;CL:0002139!7.20e-13!24;CL:0000213!5.66e-12!57;CL:0000215!5.66e-12!57;CL:0000057!3.85e-11!75;CL:0000115!4.03e-11!35;CL:0000071!3.05e-10!18;CL:0002546!3.05e-10!18;CL:0002078!6.24e-09!44;CL:0000003!1.04e-08!722;CL:1000413!2.13e-08!9;CL:0002539!2.87e-07!10;CL:0000048!5.02e-07!430;CL:0000723!7.21e-07!436 | |ontology_enrichment_celltype=CL:0000222!1.92e-29!119;CL:0000055!2.09e-22!180;CL:0000680!3.45e-19!57;CL:0000056!3.45e-19!57;CL:0000355!3.45e-19!57;CL:0000144!4.55e-19!625;CL:0000359!1.63e-18!32;CL:0000192!5.03e-18!42;CL:0000514!5.03e-18!42;CL:0000187!1.22e-17!54;CL:0000183!1.40e-17!59;CL:0000220!3.62e-17!246;CL:0002371!7.00e-17!591;CL:0002321!9.90e-17!248;CL:0000393!2.54e-14!60;CL:0000211!2.54e-14!60;CL:0000548!5.93e-14!679;CL:0000004!5.93e-14!679;CL:0000255!5.93e-14!679;CL:0000012!1.47e-13!682;CL:0002139!7.20e-13!24;CL:0000213!5.66e-12!57;CL:0000215!5.66e-12!57;CL:0000057!3.85e-11!75;CL:0000115!4.03e-11!35;CL:0000071!3.05e-10!18;CL:0002546!3.05e-10!18;CL:0002078!6.24e-09!44;CL:0000003!1.04e-08!722;CL:1000413!2.13e-08!9;CL:0002539!2.87e-07!10;CL:0000048!5.02e-07!430;CL:0000723!7.21e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.09e-20;32!CL:0002139;5.47e-17;24!CL:1000413;1.01e-12;9!CL:0000115;1.61e-12;36!CL:0000071;1.14e-11;18!CL:0000192;7.52e-11;43!CL:0002544;1.78e-10;6!CL:0002539;3.93e-09;10!CL:0002541;8.42e-09;3!CL:0002078;3.43e-08;45!CL:0000213;5.04e-08;58!CL:0000215;5.04e-08;58!CL:0000187;1.34e-07;55!CL:0002138;4.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.41e-26,121;CL:0000359,2.29e-22,32;CL:0002139,5.83e-17,24;CL:0000192,2.29e-15,43;CL:0000514,2.29e-15,43;CL:0000115,1.51e-13,36;CL:1000413,2.71e-13,9;CL:0000213,2.80e-13,58;CL:0000215,2.80e-13,58;CL:0002078,3.63e-13,45;CL:0000680,6.73e-13,58;CL:0000056,6.73e-13,58;CL:0000355,6.73e-13,58;CL:0000187,2.47e-12,55;CL:0000071,7.41e-12,18;CL:0002546,7.41e-12,18;CL:0002544,6.90e-11,6;CL:0000393,1.23e-10,61;CL:0000211,1.23e-10,61;CL:0002539,4.94e-09,10;CL:0002321,7.41e-09,250;CL:0002541,1.56e-08,3;CL:0005020,8.30e-07,6;CL:0002138,8.30e-07,6;CL:0005022,8.30e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.14e-11;18!CL:0000514;7.52e-11;43!CL:0000222;8.21e-08;121!CL:0000355;1.18e-07;58!CL:0005022;4.48e-07;6 | |||
|ontology_enrichment_disease=DOID:2394!7.05e-09!14 | |ontology_enrichment_disease=DOID:2394!7.05e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.66e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.37e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.14e-34!79;UBERON:0007798!1.14e-34!79;UBERON:0000055!5.31e-32!69;UBERON:0001981!1.13e-28!60;UBERON:0007500!1.13e-28!60;UBERON:0004537!1.13e-28!60;UBERON:0006965!1.13e-28!60;UBERON:0004872!3.28e-26!84;UBERON:0001637!4.57e-26!42;UBERON:0003509!4.57e-26!42;UBERON:0004572!4.57e-26!42;UBERON:0004535!1.67e-25!110;UBERON:0003914!7.25e-25!118;UBERON:0001009!8.58e-25!113;UBERON:0004573!5.12e-21!33;UBERON:0004571!5.12e-21!33;UBERON:0000490!1.59e-19!138;UBERON:0004290!2.51e-19!70;UBERON:0000486!2.00e-18!82;UBERON:0001134!1.55e-17!61;UBERON:0002036!1.55e-17!61;UBERON:0003082!1.55e-17!61;UBERON:0002385!1.92e-16!63;UBERON:0001015!1.92e-16!63;UBERON:0000383!1.92e-16!63;UBERON:0000914!1.17e-15!83;UBERON:0002329!1.17e-15!83;UBERON:0003077!1.17e-15!83;UBERON:0003059!1.17e-15!83;UBERON:0007282!1.17e-15!83;UBERON:0009618!1.17e-15!83;UBERON:0007285!1.17e-15!83;UBERON:0005256!2.43e-14!143;UBERON:0000947!2.73e-13!21;UBERON:0010191!2.73e-13!21;UBERON:0000487!2.64e-11!22;UBERON:0001986!3.05e-10!18;UBERON:0004638!3.05e-10!18;UBERON:0004852!3.05e-10!18;UBERON:0000119!1.17e-09!312;UBERON:0000483!2.14e-09!309;UBERON:0002100!3.66e-09!216;UBERON:0006914!4.18e-09!25;UBERON:0003915!2.13e-08!9;UBERON:0004700!2.13e-08!9;UBERON:0001917!2.13e-08!9;UBERON:0003081!2.68e-07!216;UBERON:0004237!2.87e-07!10;UBERON:0004695!2.87e-07!10;UBERON:0002111!2.87e-07!10;UBERON:0004178!2.87e-07!10;UBERON:0004111!8.62e-07!241;UBERON:0000025!9.12e-07!194 | |ontology_enrichment_uberon=UBERON:0002049!1.14e-34!79;UBERON:0007798!1.14e-34!79;UBERON:0000055!5.31e-32!69;UBERON:0001981!1.13e-28!60;UBERON:0007500!1.13e-28!60;UBERON:0004537!1.13e-28!60;UBERON:0006965!1.13e-28!60;UBERON:0004872!3.28e-26!84;UBERON:0001637!4.57e-26!42;UBERON:0003509!4.57e-26!42;UBERON:0004572!4.57e-26!42;UBERON:0004535!1.67e-25!110;UBERON:0003914!7.25e-25!118;UBERON:0001009!8.58e-25!113;UBERON:0004573!5.12e-21!33;UBERON:0004571!5.12e-21!33;UBERON:0000490!1.59e-19!138;UBERON:0004290!2.51e-19!70;UBERON:0000486!2.00e-18!82;UBERON:0001134!1.55e-17!61;UBERON:0002036!1.55e-17!61;UBERON:0003082!1.55e-17!61;UBERON:0002385!1.92e-16!63;UBERON:0001015!1.92e-16!63;UBERON:0000383!1.92e-16!63;UBERON:0000914!1.17e-15!83;UBERON:0002329!1.17e-15!83;UBERON:0003077!1.17e-15!83;UBERON:0003059!1.17e-15!83;UBERON:0007282!1.17e-15!83;UBERON:0009618!1.17e-15!83;UBERON:0007285!1.17e-15!83;UBERON:0005256!2.43e-14!143;UBERON:0000947!2.73e-13!21;UBERON:0010191!2.73e-13!21;UBERON:0000487!2.64e-11!22;UBERON:0001986!3.05e-10!18;UBERON:0004638!3.05e-10!18;UBERON:0004852!3.05e-10!18;UBERON:0000119!1.17e-09!312;UBERON:0000483!2.14e-09!309;UBERON:0002100!3.66e-09!216;UBERON:0006914!4.18e-09!25;UBERON:0003915!2.13e-08!9;UBERON:0004700!2.13e-08!9;UBERON:0001917!2.13e-08!9;UBERON:0003081!2.68e-07!216;UBERON:0004237!2.87e-07!10;UBERON:0004695!2.87e-07!10;UBERON:0002111!2.87e-07!10;UBERON:0004178!2.87e-07!10;UBERON:0004111!8.62e-07!241;UBERON:0000025!9.12e-07!194 | ||
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| ||
|short_description=p@chr7:100781561..100781583,+ | |short_description=p@chr7:100781561..100781583,+ | ||
}} | }} |
Latest revision as of 04:17, 31 July 2015
Short description: | p@chr7:100781561..100781583, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:100781561..100781583, + |
Coexpression cluster: | C4633_hepatic_spindle_chorionic_bone_Smooth_Fibroblast_basal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.41e-26 | 121 |
vascular associated smooth muscle cell | 2.29e-22 | 32 |
endothelial cell of vascular tree | 5.83e-17 | 24 |
smooth muscle cell | 2.29e-15 | 43 |
smooth muscle myoblast | 2.29e-15 | 43 |
endothelial cell | 1.51e-13 | 36 |
endothelial cell of artery | 2.71e-13 | 9 |
lining cell | 2.80e-13 | 58 |
barrier cell | 2.80e-13 | 58 |
meso-epithelial cell | 3.63e-13 | 45 |
muscle precursor cell | 6.73e-13 | 58 |
myoblast | 6.73e-13 | 58 |
multi-potent skeletal muscle stem cell | 6.73e-13 | 58 |
muscle cell | 2.47e-12 | 55 |
blood vessel endothelial cell | 7.41e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.41e-12 | 18 |
aortic endothelial cell | 6.90e-11 | 6 |
electrically responsive cell | 1.23e-10 | 61 |
electrically active cell | 1.23e-10 | 61 |
aortic smooth muscle cell | 4.94e-09 | 10 |
embryonic cell | 7.41e-09 | 250 |
chorionic membrane mesenchymal stem cell | 1.56e-08 | 3 |
lymphangioblast | 8.30e-07 | 6 |
endothelial cell of lymphatic vessel | 8.30e-07 | 6 |
vascular lymphangioblast | 8.30e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.37e-10 | 14 |