FFCP PHASE1:Hg19::chr6:82727317..82727327,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:82727317..82727327,+ | |||
|coexpression_cluster_id=C115 | |coexpression_cluster_id=C115 | ||
|description=CAGE_peak_at_chr6:82727317..82727327,+ | |description=CAGE_peak_at_chr6:82727317..82727327,+ | ||
|id=chr6:82727317..82727327,+ | |id=chr6:82727317..82727327,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000228;4.44e-18;1!CL:0002372;4.44e-18;1!CL:0000342;1.03e-17;1!CL:0002565;1.03e-17;1!CL:0002521;9.11e-07;3!CL:0002586;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,3.75e-18,1;CL:0002372,3.75e-18,1;CL:0000342,7.37e-18,1;CL:0002565,7.37e-18,1;CL:0002586,7.70e-07,3;CL:0002521,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.42e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;5.15e-23;3!DOID:127;5.15e-23;3!DOID:0060072;1.57e-17;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.44e-23,3;DOID:127,6.44e-23,3;DOID:0060072,1.86e-17,4 | |||
|ontology_enrichment_uberon=UBERON:0007625!2.42e-10!11;UBERON:0003296!8.55e-08!4;UBERON:0010133!8.55e-08!4;UBERON:0000020!6.07e-07!23;UBERON:0000488!8.13e-07!4 | |ontology_enrichment_uberon=UBERON:0007625!2.42e-10!11;UBERON:0003296!8.55e-08!4;UBERON:0010133!8.55e-08!4;UBERON:0000020!6.07e-07!23;UBERON:0000488!8.13e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;4.06e-38;4!UBERON:0010133;4.06e-38;4!UBERON:0000007;1.11e-34;2!UBERON:0001894;3.98e-22;7!UBERON:0002506;1.03e-17;1!UBERON:0001769;1.03e-17;1!UBERON:0001905;1.57e-09;2!UBERON:0002757;1.57e-09;2!UBERON:0010134;1.57e-09;2!UBERON:0005408;1.57e-09;2!UBERON:0001899;1.57e-09;2!UBERON:0007625;6.74e-07;11!UBERON:0001781;9.11e-07;3!UBERON:0002190;9.11e-07;3!UBERON:0001782;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,5.23e-38,4;UBERON:0010133,5.23e-38,4;UBERON:0000007,1.11e-34,2;UBERON:0001894,4.59e-22,7;UBERON:0006222,4.59e-22,7;UBERON:0002506,7.37e-18,1;UBERON:0001769,7.37e-18,1;UBERON:0001905,1.86e-09,2;UBERON:0002757,1.86e-09,2;UBERON:0010134,1.86e-09,2;UBERON:0005408,1.86e-09,2;UBERON:0001899,1.86e-09,2;UBERON:0007625,5.81e-07,11;UBERON:0001782,7.70e-07,3;UBERON:0005424,7.70e-07,3;UBERON:0002190,8.62e-07,3;UBERON:0003056,9.66e-07,61 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,1.26343974685366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0.286836620748814,0,0,0,0.49333509683432,0.622422070799533,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,1.06502877754984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71567810298526,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,2.85273810081437,0.868687840005475,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512556597022804,0,0,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,1.79515087581472,0.656029291399411,0.325378394664303,0,0,0.165018999841176,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0.510450849978337,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,1.19472429772959,0,0,0,0.489961987071888,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.866851769704557,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0.179287339332845,0,0,0.662091970365432,0,1.08599920350743,0.864221491201268,2.61269888087527,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0,0,0.889811221596536,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0.899606224327209,0,0,0.265841714557995,0,0,0,2.84809513243263,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0,0.366857197043358,0.115525666150338,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0.336283722218824,7.89055285507621,11.6107717589162,0.0887023701626388,0,0.342976018874837,0,0,0.118193840883968,0,0,0,0.560544326627578,0,0,0.47775168788705,0,0,0,0,0,0.828864656652147,0.51215543128185,0,0,0,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.303114792872958,0,0,0,0,0,0,0,0.112131862580613,0,0.202117188958219,0.217716747896961,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,1.26343974685366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0.286836620748814,0,0,0,0.49333509683432,0.622422070799533,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,1.06502877754984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71567810298526,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,2.85273810081437,0.868687840005475,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512556597022804,0,0,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,1.79515087581472,0.656029291399411,0.325378394664303,0,0,0.165018999841176,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0.510450849978337,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,1.19472429772959,0,0,0,0.489961987071888,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.866851769704557,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0.179287339332845,0,0,0.662091970365432,0,1.08599920350743,0.864221491201268,2.61269888087527,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0,0,0.889811221596536,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0.899606224327209,0,0,0.265841714557995,0,0,0,2.84809513243263,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0,0.366857197043358,0.115525666150338,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0.336283722218824,7.89055285507621,11.6107717589162,0.0887023701626388,0,0.342976018874837,0,0,0.118193840883968,0,0,0,0.560544326627578,0,0,0.47775168788705,0,0,0,0,0,0.828864656652147,0.51215543128185,0,0,0,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.303114792872958,0,0,0,0,0,0,0,0.112131862580613,0,0.202117188958219,0.217716747896961,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:82727317..82727327,+ | |short_description=p@chr6:82727317..82727327,+ | ||
}} | }} |
Latest revision as of 03:27, 31 July 2015
Short description: | p@chr6:82727317..82727327, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:82727317..82727327, + |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 3.75e-18 | 1 |
myotube | 3.75e-18 | 1 |
pigment cell (sensu Vertebrata) | 7.37e-18 | 1 |
iris pigment epithelial cell | 7.37e-18 | 1 |
retinal pigment epithelial cell | 7.70e-07 | 3 |
subcutaneous fat cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 5.23e-38 | 4 |
neuroendocrine gland | 5.23e-38 | 4 |
pituitary gland | 1.11e-34 | 2 |
diencephalon | 4.59e-22 | 7 |
future diencephalon | 4.59e-22 | 7 |
iris epithelium | 7.37e-18 | 1 |
iris | 7.37e-18 | 1 |
pineal body | 1.86e-09 | 2 |
regional part of epithalamus | 1.86e-09 | 2 |
secretory circumventricular organ | 1.86e-09 | 2 |
circumventricular organ | 1.86e-09 | 2 |
epithalamus | 1.86e-09 | 2 |
pigment epithelium of eye | 5.81e-07 | 11 |
pigmented layer of retina | 7.70e-07 | 3 |
presumptive retinal pigmented epithelium | 7.70e-07 | 3 |
subcutaneous adipose tissue | 8.62e-07 | 3 |
pre-chordal neural plate | 9.66e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.44e-23 | 3 |
leiomyoma | 6.44e-23 | 3 |
benign neoplasm | 1.86e-17 | 4 |