FFCP PHASE1:Hg19::chr6:73344775..73344779,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:73344775..73344779,+ | |||
|description=CAGE_peak_at_chr6:73344775..73344779,+ | |||
|id=chr6:73344775..73344779,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.86e-08!24;CL:0000826!3.86e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000817;9.12e-14;1!CL:0000054;1.59e-07;2!CL:0000137;1.59e-07;2!CL:0000092;1.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.87e-07,2;CL:0000137,1.87e-07,2;CL:0000092,1.87e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.64e-17;3!UBERON:0005425;9.12e-14;1 | |||
|ontology_enrichment_disease=DOID:2531!5.16e-17!51;DOID:0060083!5.16e-17!51;DOID:1240!3.94e-12!39;DOID:162!1.33e-10!235;DOID:14566!1.80e-10!239;DOID:0050686!2.78e-10!137;DOID:8692!2.37e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:200;1.59e-07;2!DOID:4305;1.59e-07;2!DOID:3910;1.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.71e-08,51;DOID:0060083,1.71e-08,51;DOID:200,1.87e-07,2;DOID:4305,1.87e-07,2;DOID:3910,2.25e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001869!3.37e-12!32;UBERON:0002619!2.80e-11!22;UBERON:0001893!3.93e-11!34;UBERON:0001950!5.03e-11!20;UBERON:0000956!1.39e-10!25;UBERON:0000203!1.39e-10!25;UBERON:0002791!1.71e-10!33;UBERON:0002780!2.29e-10!41;UBERON:0001890!2.29e-10!41;UBERON:0006240!2.29e-10!41;UBERON:0002020!5.06e-10!34;UBERON:0003528!5.06e-10!34;UBERON:0003080!5.74e-10!42;UBERON:0000955!1.32e-08!69;UBERON:0006238!1.32e-08!69;UBERON:0000073!1.48e-08!94;UBERON:0001016!1.48e-08!94;UBERON:0003056!7.47e-08!61;UBERON:0000153!1.60e-07!129;UBERON:0007811!1.60e-07!129;UBERON:0002346!1.93e-07!90;UBERON:0001049!3.69e-07!57;UBERON:0005068!3.69e-07!57;UBERON:0006241!3.69e-07!57;UBERON:0007135!3.69e-07!57;UBERON:0000924!6.66e-07!173;UBERON:0006601!6.66e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.12e-14;1!UBERON:0001785;9.12e-14;1!UBERON:0002464;9.12e-14;1!UBERON:0004904;9.12e-14;1!UBERON:0001021;9.12e-14;1!UBERON:0002346;2.21e-13;4!UBERON:0000923;2.21e-13;4!UBERON:0010316;2.21e-13;4!UBERON:0005291;2.21e-13;4!UBERON:0002050;6.79e-11;5!UBERON:0005423;6.79e-11;5!UBERON:0002771;1.59e-07;2!UBERON:0004903;1.59e-07;2!UBERON:0003714;1.59e-07;2!UBERON:0005162;1.59e-07;2!UBERON:0000122;1.59e-07;2!UBERON:0002173;1.59e-07;2!UBERON:0002186;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.85e-14,1;UBERON:0001785,5.85e-14,1;UBERON:0002464,5.85e-14,1;UBERON:0004904,5.85e-14,1;UBERON:0001021,5.85e-14,1;UBERON:0003902,5.85e-14,1;UBERON:0005425,5.85e-14,1;UBERON:0000966,2.45e-09,6;UBERON:0005388,2.45e-09,6;UBERON:0001802,2.45e-09,6;UBERON:0002346,2.53e-08,86;UBERON:0003714,1.28e-07,2;UBERON:0005162,1.28e-07,2;UBERON:0000122,1.28e-07,2;UBERON:0002771,1.99e-07,2;UBERON:0004903,2.25e-07,2;UBERON:0002173,2.25e-07,2;UBERON:0002186,2.25e-07,2;UBERON:0003056,7.34e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.61130724598361,0.57470412614962,0.550975469195755,0,0,0,0,0,0,0.309868802321207,2.55904618477359,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657751618414705,0.552700035571697,0,0,0,0,0,0,0,0.506039384039006,0.318565414324097,0,0,0,0,0,0,0,0,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,2.86919764810153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.560425719967636,0,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,1.00988449083511,0.497992903438899,0,0.798317485731266,0,0.846694330895531,1.94773164164733,0.280797178113459,1.82587743226554,0.156679895773023,0,0.50787533340481,0.321176150207399,0.605399121573143,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0.296964680832639,0,0,0.281338832821026,0,0,0,0,0,0,0,0.246169610922139,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.568967241427498,1.01701460117107,0.236387681767936,0,0.583209226766509,0.347249989866585,0,0.723578631752448,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,1.41282230755522,0.498635045700469,0,0,0,0.189753732724185,0.953619473882272,0,0,0,0,0,0,0,0.296521128680622,0,0.417687798021821,0,0,0,0.729819156862664,0,0,0,0,0.30607276163049,0,0,0,0.664653872707185,0,0,0,0.569219092059585,0,0,0.489961987071888,0,0,0.687944129886466,0,0,0,0,0,0,0.274083849293502,0.397429223405979,0.126621591911757,0,0,0,0,0,0,0,0,0.124252535565433,0,0.67952103036807,0.209205692624666,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.508039992394707,0,0.544813624446302,0,0,0,0,0,0.182248669974074,0,0,0,0.844802692155252,0.179287339332845,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0.656740165994712,0.340776043570843,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0.365377795142688,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.751145584238999,0,0,0,0.415045904808692,0.124980407962107,0.454947352624943,0.570930667089935,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,1.10606748921385,0,0,0,0.327609848846413,0,0,0,0.320075189082423,0.344429959321631,0,0,0,0,0.127894371303652,0.215649622793364,0,0.436838552768056,0.509197589862076,1.91317428091515,0.123935764259002,0,0.318004350653419,0.23658523500376,0,0,0,0.321146125482298,1.41696576325585,0.159633859057151,0.82046545696302,0.252071696221718,0.0691572524642179,0.161475645631851,1.42769420259154,0.196295437002051,0,0.183428598521679,0,1.1441462864015,0,0,0,0,0.781514011233092,0,0.327543835020193,0,0.202612753855184,0,0.826747186004736,0.19024743058172,1.09394961803644,0,0,1.40696995487696,0.127762427639595,0,0.336283722218824,0,0,0,0,0,0.271878931907327,0,0,0,0.078493092850514,0.628462359664008,0,0,0,0,0.0714765441766563,1.42212250559454,0,0,0,0.207216164163037,0.17071847709395,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0.22589216407792,0.329821550236287,0.150962843566674,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0.458729283404541,0,0.157771562193185,0.0679914901909147,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0.426467963801962,0.952257725854961,0,0.124149428591716,0.224263725161227,0,0.606351566874658,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0.213454691755431,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr6:73344775..73344779,+ | |||
}} |
Latest revision as of 03:02, 31 July 2015
Short description: | p@chr6:73344775..73344779, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:73344775..73344779, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.87e-07 | 2 |
osteocyte | 1.87e-07 | 2 |
osteoclast | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.85e-14 | 1 |
cranial nerve | 5.85e-14 | 1 |
nerve trunk | 5.85e-14 | 1 |
nerve connecting eye with brain | 5.85e-14 | 1 |
nerve | 5.85e-14 | 1 |
retinal neural layer | 5.85e-14 | 1 |
presumptive neural retina | 5.85e-14 | 1 |
retina | 2.45e-09 | 6 |
photoreceptor array | 2.45e-09 | 6 |
posterior segment of eyeball | 2.45e-09 | 6 |
neurectoderm | 2.53e-08 | 86 |
neural tissue | 1.28e-07 | 2 |
multi cell component structure | 1.28e-07 | 2 |
neuron projection bundle | 1.28e-07 | 2 |
middle temporal gyrus | 1.99e-07 | 2 |
bronchoalveolar duct junction | 2.25e-07 | 2 |
alveolar duct | 2.25e-07 | 2 |
bronchiole | 2.25e-07 | 2 |
pre-chordal neural plate | 7.34e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.71e-08 | 51 |
immune system cancer | 1.71e-08 | 51 |
giant cell tumor | 1.87e-07 | 2 |
bone giant cell tumor | 1.87e-07 | 2 |
lung adenocarcinoma | 2.25e-07 | 2 |