FFCP PHASE1:Hg19::chr6:67772946..67772961,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:67772946..67772961,+ | |||
|coexpression_cluster_id=C312 | |coexpression_cluster_id=C312 | ||
|description=CAGE_peak_at_chr6:67772946..67772961,+ | |description=CAGE_peak_at_chr6:67772946..67772961,+ | ||
|id=chr6:67772946..67772961,+ | |id=chr6:67772946..67772961,+ | ||
|ontology_enrichment_celltype=CL:1000415;3.11e-21;2 | |ontology_enrichment_celltype=CL:1000415!2.15e-07!2;CL:0000054!2.91e-07!2;CL:0000137!2.91e-07!2;CL:0000092!2.91e-07!2 | ||
| | |ontology_enrichment_celltype_v019=CL:1000415;3.11e-21;2 | ||
|ontology_enrichment_disease=DOID:0050619;1.81e-40;1!DOID:1357;1.81e-40;1!DOID:4468;5.15e-21;2 | |ontology_enrichment_celltype_v019_2=CL:1000415,3.11e-21,2 | ||
|ontology_enrichment_uberon=UBERON:0001282;1.81e-40;1!UBERON:0001764;1.81e-40;1!UBERON:0009842;1.81e-40;1!UBERON:0003704;1.81e-40;1!UBERON:0001825;1.81e-40;1!UBERON:0001171;1.81e-40;1!UBERON:0001172;1.81e-40;1!UBERON:0002294;1.21e-23;7!UBERON:0001173;1.21e-23;7!UBERON:0002110;1.22e-14;3!UBERON:0001280;1.71e-14;3!UBERON:0004647;1.71e-14;3!UBERON:0002394;3.26e-11;4!UBERON:0003928;3.26e-11;4!UBERON:0002423;2.24e-07;25 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!8.94e-14!8;DOID:0050619!2.32e-13!1;DOID:1357!2.32e-13!1;DOID:0060085!2.95e-13!1;DOID:3165!2.95e-13!1;DOID:0060121!2.95e-13!1;DOID:2438!2.95e-13!1;DOID:4418!2.95e-13!1;DOID:162!2.77e-09!235;DOID:14566!4.76e-09!239;DOID:201!9.27e-09!6;DOID:0060100!9.27e-09!6;DOID:4468!2.43e-07!2;DOID:200!2.91e-07!2;DOID:4305!2.91e-07!2;DOID:4231!4.42e-07!2;DOID:1907!4.42e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.81e-40;1!DOID:1357;1.81e-40;1!DOID:4468;5.15e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.21e-40,1;DOID:1357,2.21e-40,1;DOID:4468,4.66e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0001282!1.82e-13!1;UBERON:0009842!1.82e-13!1;UBERON:0003704!1.82e-13!1;UBERON:0001171!1.82e-13!1;UBERON:0001172!1.82e-13!1;UBERON:0001764!2.32e-13!1;UBERON:0001825!2.32e-13!1;UBERON:0002294!7.30e-08!7;UBERON:0001173!7.30e-08!7;UBERON:0004912!7.30e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.81e-40;1!UBERON:0001764;1.81e-40;1!UBERON:0009842;1.81e-40;1!UBERON:0003704;1.81e-40;1!UBERON:0001825;1.81e-40;1!UBERON:0001171;1.81e-40;1!UBERON:0001172;1.81e-40;1!UBERON:0002294;1.21e-23;7!UBERON:0001173;1.21e-23;7!UBERON:0002110;1.22e-14;3!UBERON:0001280;1.71e-14;3!UBERON:0004647;1.71e-14;3!UBERON:0002394;3.26e-11;4!UBERON:0003928;3.26e-11;4!UBERON:0002423;2.24e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,9.91e-41,1;UBERON:0009842,9.91e-41,1;UBERON:0003704,9.91e-41,1;UBERON:0001171,9.91e-41,1;UBERON:0001172,9.91e-41,1;UBERON:0001764,2.21e-40,1;UBERON:0001825,2.21e-40,1;UBERON:0002294,1.03e-18,9;UBERON:0001173,1.03e-18,9;UBERON:0004912,1.03e-18,9;UBERON:0002110,1.22e-14,3;UBERON:0006242,1.22e-14,3;UBERON:0001280,1.40e-14,3;UBERON:0004647,1.40e-14,3;UBERON:0005171,1.40e-14,3;UBERON:0002394,5.92e-08,6;UBERON:0003928,5.92e-08,6;UBERON:0009497,2.14e-07,25;UBERON:0000015,2.14e-07,25;UBERON:0002423,2.14e-07,25;UBERON:0006235,2.14e-07,25;UBERON:0004161,2.14e-07,25 | |||
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|short_description=p@chr6:67772946..67772961,+ | |short_description=p@chr6:67772946..67772961,+ | ||
}} | }} |
Latest revision as of 02:46, 31 July 2015
Short description: | p@chr6:67772946..67772961, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:67772946..67772961, + |
Coexpression cluster: | C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 3.11e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 9.91e-41 | 1 |
acinus | 9.91e-41 | 1 |
intrahepatic bile duct | 9.91e-41 | 1 |
portal lobule | 9.91e-41 | 1 |
hepatic acinus | 9.91e-41 | 1 |
maxillary sinus | 2.21e-40 | 1 |
paranasal sinus | 2.21e-40 | 1 |
biliary system | 1.03e-18 | 9 |
biliary tree | 1.03e-18 | 9 |
biliary bud | 1.03e-18 | 9 |
gallbladder | 1.22e-14 | 3 |
gall bladder primordium | 1.22e-14 | 3 |
liver parenchyma | 1.40e-14 | 3 |
liver lobule | 1.40e-14 | 3 |
hepatic duct | 1.40e-14 | 3 |
bile duct | 5.92e-08 | 6 |
digestive system duct | 5.92e-08 | 6 |
epithelium of foregut-midgut junction | 2.14e-07 | 25 |
anatomical boundary | 2.14e-07 | 25 |
hepatobiliary system | 2.14e-07 | 25 |
foregut-midgut junction | 2.14e-07 | 25 |
septum transversum | 2.14e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.21e-40 | 1 |
maxillary sinus cancer | 2.21e-40 | 1 |
clear cell adenocarcinoma | 4.66e-21 | 2 |