FFCP PHASE1:Hg19::chr6:66708902..66708907,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:66708902..66708907,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr6:66708902..66708907,- | |description=CAGE_peak_at_chr6:66708902..66708907,- | ||
|id=chr6:66708902..66708907,- | |id=chr6:66708902..66708907,- | ||
|ontology_enrichment_celltype=CL:0000319!6.47e-17!1;CL:0000946!2.63e-16!1;CL:0000786!2.63e-16!1;CL:0000980!2.63e-16!1;CL:0000159!4.02e-09!2;CL:0000054!4.34e-09!2;CL:0000137!4.34e-09!2;CL:0000092!4.34e-09!2;CL:0000785!8.09e-09!2;CL:0000955!8.09e-09!2;CL:0000818!8.09e-09!2;CL:0000954!8.09e-09!2;CL:0000816!8.09e-09!2 | |ontology_enrichment_celltype=CL:0000319!6.47e-17!1;CL:0000946!2.63e-16!1;CL:0000786!2.63e-16!1;CL:0000980!2.63e-16!1;CL:0000159!4.02e-09!2;CL:0000054!4.34e-09!2;CL:0000137!4.34e-09!2;CL:0000092!4.34e-09!2;CL:0000785!8.09e-09!2;CL:0000955!8.09e-09!2;CL:0000818!8.09e-09!2;CL:0000954!8.09e-09!2;CL:0000816!8.09e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000319;3.61e-34;1!CL:0000159;7.67e-18;2!CL:0000054;1.07e-17;2!CL:0000137;1.07e-17;2!CL:0000092;1.07e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,3.61e-34,1;CL:0000159,7.67e-18,2;CL:0000054,9.07e-18,2;CL:0000137,9.07e-18,2;CL:0000092,9.07e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease=DOID:3030!6.47e-17!1;DOID:0060085!7.57e-17!1;DOID:3165!7.57e-17!1;DOID:0060121!7.57e-17!1;DOID:2438!7.57e-17!1;DOID:4418!7.57e-17!1;DOID:200!4.34e-09!2;DOID:4305!4.34e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3030;3.61e-34;1!DOID:0060085;7.05e-34;1!DOID:3165;7.05e-34;1!DOID:0060121;7.05e-34;1!DOID:2438;7.05e-34;1!DOID:4418;7.05e-34;1!DOID:200;1.07e-17;2!DOID:4305;1.07e-17;2!DOID:0060072;1.57e-09;4!DOID:201;8.97e-07;6!DOID:0060100;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.61e-34,1;DOID:0060085,5.05e-34,1;DOID:3165,5.05e-34,1;DOID:0060121,5.05e-34,1;DOID:2438,5.05e-34,1;DOID:4418,5.05e-34,1;DOID:200,9.07e-18,2;DOID:4305,9.07e-18,2;DOID:0060072,1.44e-09,4;DOID:201,8.48e-07,6;DOID:0060100,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001282!1.21e-16!1;UBERON:0009842!1.21e-16!1;UBERON:0003704!1.21e-16!1;UBERON:0001171!1.21e-16!1;UBERON:0001172!1.21e-16!1;UBERON:0000473!8.62e-09!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000014;1.57e-09;4!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0000014,1.44e-09,4;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
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|short_description=p@chr6:66708902..66708907,- | |short_description=p@chr6:66708902..66708907,- | ||
}} | }} |
Latest revision as of 02:45, 31 July 2015
Short description: | p@chr6:66708902..66708907, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:66708902..66708907, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 3.61e-34 | 1 |
seromucus secreting cell | 7.67e-18 | 2 |
bone matrix secreting cell | 9.07e-18 | 2 |
osteocyte | 9.07e-18 | 2 |
osteoclast | 9.07e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
zone of skin | 1.44e-09 | 4 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.61e-34 | 1 |
organ system benign neoplasm | 5.05e-34 | 1 |
skin benign neoplasm | 5.05e-34 | 1 |
integumentary system benign neoplasm | 5.05e-34 | 1 |
dermis tumor | 5.05e-34 | 1 |
cutaneous fibrous histiocytoma | 5.05e-34 | 1 |
giant cell tumor | 9.07e-18 | 2 |
bone giant cell tumor | 9.07e-18 | 2 |
benign neoplasm | 1.44e-09 | 4 |
connective tissue cancer | 8.48e-07 | 6 |
musculoskeletal system cancer | 8.48e-07 | 6 |