FFCP PHASE1:Hg19::chr6:64517213..64517228,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:64517213..64517228,+ | |||
|description=CAGE_peak_at_chr6:64517213..64517228,+ | |||
|id=chr6:64517213..64517228,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.31e-15!42;CL:0000860!2.75e-15!45;CL:0000188!9.10e-11!9;CL:0002194!1.23e-08!63;CL:0000576!1.23e-08!63;CL:0000040!1.23e-08!63;CL:0000559!1.23e-08!63;CL:0002009!3.54e-08!65;CL:0000766!1.08e-07!76;CL:0000839!3.75e-07!70;CL:0000557!5.75e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002582;1.21e-17;3!CL:0002622;1.21e-17;3!CL:0002583;6.40e-13;2!CL:0002195;5.46e-12;2!CL:0002571;5.46e-12;2!CL:0002334;7.13e-12;12!CL:0000515;2.80e-08;3!CL:0000680;1.29e-07;7!CL:0000860;8.39e-07;33!CL:0002057;8.39e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002582,1.44e-17,3;CL:0002622,1.70e-17,3;CL:0002583,6.25e-13,2;CL:0002334,7.58e-12,12;CL:0002195,1.01e-11,2;CL:0002571,1.01e-11,2;CL:0000860,1.51e-07,42;CL:0002057,1.51e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;8.00e-07;1 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.45e-11!448;UBERON:0004120!2.45e-11!448;UBERON:0006603!2.45e-11!448;UBERON:0002204!2.45e-09!167;UBERON:0004290!4.12e-08!70;UBERON:0002390!9.81e-08!102;UBERON:0003061!9.81e-08!102;UBERON:0000914!1.21e-07!83;UBERON:0002329!1.21e-07!83;UBERON:0003077!1.21e-07!83;UBERON:0003059!1.21e-07!83;UBERON:0007282!1.21e-07!83;UBERON:0009618!1.21e-07!83;UBERON:0007285!1.21e-07!83;UBERON:0002193!2.22e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.48e-12;16!UBERON:0002036;7.48e-12;16!UBERON:0002072;5.07e-11;5!UBERON:0002367;1.71e-08;11!UBERON:0010147;1.71e-08;11!UBERON:0003937;8.60e-08;12!UBERON:0005399;8.60e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,5.54e-11,5;UBERON:0002367,1.98e-08,11;UBERON:0010147,1.98e-08,11;UBERON:0009846,1.98e-08,11;UBERON:0003353,1.98e-08,11;UBERON:0004902,1.98e-08,11;UBERON:0003820,1.98e-08,11;UBERON:0009847,1.98e-08,11;UBERON:0003937,9.87e-08,12;UBERON:0005399,9.87e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,1.10799081706375,0,0.434021741431704,0,0,0,0.872389432677388,0,0,0,0,0.309706370895104,0.28769239232215,0.512321413058201,0.47296445977717,0,0,1.35426486594342,0.188242339542605,0,0,2.44867113896722,1.92557416245656,0.639337125799041,0,0.199463657621632,0.426224750532694,3.77272010217159,0.56738522469114,0,0,0,0.217188844705117,1.81619850790011,2.94622108790052,2.84816148696796,0,0,0.209658645508376,0.44931452458598,0.600707571366025,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0.949265659568129,0,0,3.87780264148325,0,0,0,0,0,0,1.12135520028461,0,0.24666754841716,0.622422070799533,0,0.326923806226917,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.352303495931295,0,0.702254033511242,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277765335475589,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,1.28680194292333,0,0.823240336780769,1.30294473717494,1.06617584622764,0,0,0,0.099972991182057,0,0,0,0,0,0,1.01346914667305,1.43833425785268,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.781952530212746,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,2.92998418225046,4.08391968220192,4.5169935807595,1.03850885836724,1.62694529843943,0,0,0,1.03333003348146,4.18809686415449,1.57349297951309,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0.386682873168488,1.3864375540318,0.921022048356777,0.551346289938122,1.28904293841928,0.145016693914229,0.681813019328807,1.69160867728801,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0.38126038784765,0,0,0,0,0.899362287916574,0.54907405947211,0.942499218765491,0.404364963146632,0,0,0,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,0,0.860468113224309,0.0982490410131212,0,0,0,0,0,0,0.384888450902048,0,0,0,0,0,0,0,0.507447609232169,2.29391162142713,1.70894156152249,0.952927101831156,0,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,1.20390222730132,0,0.0730893170861856,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0.432164393964449,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78741985211799,0,0,0,0,0,0,0,0,0,0,0,0,0.528001682597033,0,0,0,0,0,1.08599920350743,0,0.653174720218818,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,0,0.554805861502613,0,0,0.889811221596536,0,0,0,0,0,0.449803112163605,0.155262956876259,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44709084162552,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0.170426809518315,0,0,0.31020638566432,0,0,0,0,0,1.84793052341245,0,0,0,0,0,0,0,1.66059127923341,0,0,0,0,0.235676547101626,0,0.297046400327086,0,0,0,0,0,0,0,0.401206833445841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:64517213..64517228,+ | |||
}} |
Latest revision as of 02:43, 31 July 2015
Short description: | p@chr6:64517213..64517228, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:64517213..64517228, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visceral preadipocyte | 1.44e-17 | 3 |
prostate stromal cell | 1.70e-17 | 3 |
subcutaneous preadipocyte | 6.25e-13 | 2 |
preadipocyte | 7.58e-12 | 12 |
hepatic stem cell | 1.01e-11 | 2 |
hepatic mesenchymal stem cell | 1.01e-11 | 2 |
classical monocyte | 1.51e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.51e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 5.54e-11 | 5 |
prostate gland | 1.98e-08 | 11 |
male accessory sex gland | 1.98e-08 | 11 |
embryonic cloacal epithelium | 1.98e-08 | 11 |
epithelium of hindgut | 1.98e-08 | 11 |
urogenital sinus epithelium | 1.98e-08 | 11 |
prostate bud | 1.98e-08 | 11 |
prostate field | 1.98e-08 | 11 |
sex gland | 9.87e-08 | 12 |
male reproductive gland | 9.87e-08 | 12 |