FFCP PHASE1:Hg19::chr6:64237756..64237769,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:64237756..64237769,+ | |||
|coexpression_cluster_id=C1088 | |||
|description=CAGE_peak_at_chr6:64237756..64237769,+ | |description=CAGE_peak_at_chr6:64237756..64237769,+ | ||
|id=chr6:64237756..64237769,+ | |id=chr6:64237756..64237769,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.33e-19!254;CL:0000223!6.22e-15!59;CL:0002541!1.07e-10!3;CL:0002150!2.49e-10!3;CL:0000861!2.49e-10!3;CL:0002621!4.57e-10!3;CL:0002076!9.75e-10!43;CL:0002368!1.76e-08!13 | |ontology_enrichment_celltype=CL:0000066!1.33e-19!254;CL:0000223!6.22e-15!59;CL:0002541!1.07e-10!3;CL:0002150!2.49e-10!3;CL:0000861!2.49e-10!3;CL:0002621!4.57e-10!3;CL:0002076!9.75e-10!43;CL:0002368!1.76e-08!13 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.72e-14!106;DOID:0050687!9.48e-11!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.20e-22!9;UBERON:0001004!1.21e-14!72;UBERON:0004119!1.30e-13!169;UBERON:0000925!1.30e-13!169;UBERON:0006595!1.30e-13!169;UBERON:0000065!4.70e-12!53;UBERON:0000476!1.07e-10!3;UBERON:0000920!1.07e-10!3;UBERON:0001007!2.82e-10!155;UBERON:0001555!2.82e-10!155;UBERON:0007026!2.82e-10!155;UBERON:0001949!4.57e-10!3;UBERON:0008947!6.59e-10!38;UBERON:0003258!6.59e-10!38;UBERON:0001557!7.33e-10!19;UBERON:0001041!1.60e-09!98;UBERON:0000077!1.55e-08!130;UBERON:0008835!2.04e-08!22;UBERON:0003894!2.04e-08!22;UBERON:0009854!5.43e-08!23;UBERON:0000072!9.71e-08!46;UBERON:0004921!1.04e-07!129;UBERON:0004185!1.04e-07!129;UBERON:0003124!1.48e-07!7;UBERON:0003929!1.80e-07!54;UBERON:0007499!3.04e-07!25;UBERON:0009497!3.04e-07!25;UBERON:0000015!3.04e-07!25;UBERON:0002423!3.04e-07!25;UBERON:0006235!3.04e-07!25;UBERON:0004161!3.04e-07!25;UBERON:0002365!4.49e-07!31;UBERON:0002330!4.49e-07!31;UBERON:0009856!6.49e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.01e-10;25!UBERON:0001905;7.79e-09;2!UBERON:0002757;7.79e-09;2!UBERON:0010134;7.79e-09;2!UBERON:0005408;7.79e-09;2!UBERON:0001899;7.79e-09;2!UBERON:0002107;7.37e-08;19!UBERON:0006925;7.37e-08;19!UBERON:0002530;2.22e-07;57!UBERON:0002368;9.17e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,1.78e-11,22;UBERON:0003894,1.78e-11,22;UBERON:0009854,5.45e-11,23;UBERON:0007499,3.92e-10,25;UBERON:0009497,3.92e-10,25;UBERON:0000015,3.92e-10,25;UBERON:0002423,3.92e-10,25;UBERON:0006235,3.92e-10,25;UBERON:0004161,3.92e-10,25;UBERON:0003929,5.29e-10,54;UBERON:0009856,9.39e-10,26;UBERON:0002530,4.42e-09,59;UBERON:0001905,8.74e-09,2;UBERON:0002757,8.74e-09,2;UBERON:0010134,8.74e-09,2;UBERON:0005408,8.74e-09,2;UBERON:0001899,8.74e-09,2;UBERON:0005911,9.88e-09,82;UBERON:0002107,7.28e-08,19;UBERON:0006925,7.28e-08,19;UBERON:0008836,7.28e-08,19;UBERON:0002368,3.01e-07,35 | |||
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| ||
|short_description=p@chr6:64237756..64237769,+ | |short_description=p@chr6:64237756..64237769,+ | ||
}} | }} |
Latest revision as of 02:41, 31 July 2015
Short description: | p@chr6:64237756..64237769, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:64237756..64237769, + |
Coexpression cluster: | C1088_liver_giant_anaplastic_glassy_bile_Hepatocyte_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 1.78e-11 | 22 |
liver primordium | 1.78e-11 | 22 |
digestive tract diverticulum | 5.45e-11 | 23 |
epithelial sac | 3.92e-10 | 25 |
epithelium of foregut-midgut junction | 3.92e-10 | 25 |
anatomical boundary | 3.92e-10 | 25 |
hepatobiliary system | 3.92e-10 | 25 |
foregut-midgut junction | 3.92e-10 | 25 |
septum transversum | 3.92e-10 | 25 |
gut epithelium | 5.29e-10 | 54 |
sac | 9.39e-10 | 26 |
gland | 4.42e-09 | 59 |
pineal body | 8.74e-09 | 2 |
regional part of epithalamus | 8.74e-09 | 2 |
secretory circumventricular organ | 8.74e-09 | 2 |
circumventricular organ | 8.74e-09 | 2 |
epithalamus | 8.74e-09 | 2 |
endo-epithelium | 9.88e-09 | 82 |
liver | 7.28e-08 | 19 |
digestive gland | 7.28e-08 | 19 |
liver bud | 7.28e-08 | 19 |
endocrine gland | 3.01e-07 | 35 |