FFCP PHASE1:Hg19::chr6:41712177..41712188,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:41712177..41712188,- | |||
|coexpression_cluster_id=C308 | |||
|description=CAGE_peak_at_chr6:41712177..41712188,- | |description=CAGE_peak_at_chr6:41712177..41712188,- | ||
|id=chr6:41712177..41712188,- | |id=chr6:41712177..41712188,- | ||
|ontology_enrichment_celltype=CL:0000181!9.91e-10!12;CL:0000417!9.91e-10!12;CL:0000668!9.91e-10!12;CL:0000414!9.91e-10!12;CL:0000412!9.91e-10!12;CL:0000182!9.91e-10!12 | |ontology_enrichment_celltype=CL:0000181!9.91e-10!12;CL:0000417!9.91e-10!12;CL:0000668!9.91e-10!12;CL:0000414!9.91e-10!12;CL:0000412!9.91e-10!12;CL:0000182!9.91e-10!12 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!8.40e-18!3;UBERON:0004054!8.40e-18!3;UBERON:0002171!3.98e-14!1;UBERON:0006518!3.98e-14!1;UBERON:0008949!3.98e-14!1;UBERON:0000101!3.98e-14!1;UBERON:0002167!3.98e-14!1;UBERON:0001000!4.53e-14!1;UBERON:0005352!4.53e-14!1;UBERON:0000998!6.65e-14!1;UBERON:0006868!6.65e-14!1;UBERON:0005904!1.34e-13!4;UBERON:0005177!2.11e-08!107;UBERON:0004921!2.23e-08!129;UBERON:0004185!2.23e-08!129;UBERON:0000077!2.31e-08!130;UBERON:0001007!2.75e-08!155;UBERON:0001555!2.75e-08!155;UBERON:0007026!2.75e-08!155;UBERON:0009497!4.30e-08!25;UBERON:0000015!4.30e-08!25;UBERON:0002423!4.30e-08!25;UBERON:0006235!4.30e-08!25;UBERON:0004161!4.30e-08!25;UBERON:0004119!1.74e-07!169;UBERON:0000925!1.74e-07!169;UBERON:0006595!1.74e-07!169;UBERON:0001255!1.87e-07!2;UBERON:0001556!1.87e-07!2;UBERON:0001870!2.40e-07!2;UBERON:0000466!5.67e-07!126;UBERON:0005911!7.87e-07!82;UBERON:0002075!8.00e-07!18 | |ontology_enrichment_uberon=UBERON:0006947!8.40e-18!3;UBERON:0004054!8.40e-18!3;UBERON:0002171!3.98e-14!1;UBERON:0006518!3.98e-14!1;UBERON:0008949!3.98e-14!1;UBERON:0000101!3.98e-14!1;UBERON:0002167!3.98e-14!1;UBERON:0001000!4.53e-14!1;UBERON:0005352!4.53e-14!1;UBERON:0000998!6.65e-14!1;UBERON:0006868!6.65e-14!1;UBERON:0005904!1.34e-13!4;UBERON:0005177!2.11e-08!107;UBERON:0004921!2.23e-08!129;UBERON:0004185!2.23e-08!129;UBERON:0000077!2.31e-08!130;UBERON:0001007!2.75e-08!155;UBERON:0001555!2.75e-08!155;UBERON:0007026!2.75e-08!155;UBERON:0009497!4.30e-08!25;UBERON:0000015!4.30e-08!25;UBERON:0002423!4.30e-08!25;UBERON:0006235!4.30e-08!25;UBERON:0004161!4.30e-08!25;UBERON:0004119!1.74e-07!169;UBERON:0000925!1.74e-07!169;UBERON:0006595!1.74e-07!169;UBERON:0001255!1.87e-07!2;UBERON:0001556!1.87e-07!2;UBERON:0001870!2.40e-07!2;UBERON:0000466!5.67e-07!126;UBERON:0005911!7.87e-07!82;UBERON:0002075!8.00e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0001000;5.05e-34;1!UBERON:0002171;5.05e-34;1!UBERON:0006518;5.05e-34;1!UBERON:0008949;5.05e-34;1!UBERON:0000101;5.05e-34;1!UBERON:0005352;5.05e-34;1!UBERON:0002167;5.05e-34;1!UBERON:0002114;2.59e-12;2!UBERON:0006947;2.59e-12;3!UBERON:0004054;2.59e-12;3!UBERON:0005904;1.44e-09;4!UBERON:0002108;6.55e-08;4!UBERON:0000945;7.49e-08;5!UBERON:0010039;7.49e-08;5!UBERON:0002048;5.09e-07;22!UBERON:0000117;5.09e-07;22!UBERON:0000171;5.09e-07;22!UBERON:0000170;5.09e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.61e-34,1;UBERON:0006518,3.61e-34,1;UBERON:0008949,3.61e-34,1;UBERON:0000101,3.61e-34,1;UBERON:0002167,3.61e-34,1;UBERON:0001000,5.05e-34,1;UBERON:0005352,5.05e-34,1;UBERON:0006947,2.59e-12,3;UBERON:0004054,2.59e-12,3;UBERON:0002114,2.89e-12,2;UBERON:0005904,1.44e-09,4;UBERON:0002108,7.01e-08,4;UBERON:0002048,4.94e-07,22;UBERON:0000117,4.94e-07,22;UBERON:0000171,4.94e-07,22;UBERON:0000170,4.94e-07,22;UBERON:0005597,4.94e-07,22;UBERON:0000118,4.94e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36750641709634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33937062838473,0,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46067277649303,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36750641709634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33937062838473,0,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46067277649303,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:41712177..41712188,- | |short_description=p@chr6:41712177..41712188,- | ||
}} | }} |
Latest revision as of 01:35, 31 July 2015
Short description: | p@chr6:41712177..41712188, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:41712177..41712188, - |
Coexpression cluster: | C308_lung_Hepatocyte_liver_thyroid_heart_left_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.61e-34 | 1 |
right lung lobe | 3.61e-34 | 1 |
lower lobe of lung | 3.61e-34 | 1 |
lobe of lung | 3.61e-34 | 1 |
right lung | 3.61e-34 | 1 |
vas deferens | 5.05e-34 | 1 |
spermatic cord | 5.05e-34 | 1 |
male genital duct | 2.59e-12 | 3 |
internal male genitalia | 2.59e-12 | 3 |
duodenum | 2.89e-12 | 2 |
duct of male reproductive system | 1.44e-09 | 4 |
small intestine | 7.01e-08 | 4 |
lung | 4.94e-07 | 22 |
respiratory tube | 4.94e-07 | 22 |
respiration organ | 4.94e-07 | 22 |
pair of lungs | 4.94e-07 | 22 |
lung primordium | 4.94e-07 | 22 |
lung bud | 4.94e-07 | 22 |