FFCP PHASE1:Hg19::chr6:41004368..41004374,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:41004368..41004374,+
|short_description=p@chr6:41004368..41004374,+
|description=CAGE_peak_at_chr6:41004368..41004374,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:41004368..41004374,+ | |||
|description=CAGE_peak_at_chr6:41004368..41004374,+ | |||
|id=chr6:41004368..41004374,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.62e-37!254;CL:0002076!1.68e-20!43;CL:0000223!1.42e-15!59;CL:0002251!4.89e-15!21;CL:0000076!4.63e-08!62;CL:0002327!4.83e-08!4;CL:0002202!2.15e-07!9;CL:0002632!2.15e-07!9;CL:0002166!8.60e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002327;9.98e-27;4!CL:0000307;9.62e-17;3!CL:0002202;2.27e-12;9!CL:0002632;2.27e-12;9!CL:0002368;9.87e-09;13!CL:0000317;2.50e-07;2!CL:1000448;2.50e-07;2!CL:0002308;2.50e-07;2!CL:0002140;2.50e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,5.39e-27,4;CL:0000068,1.17e-16,3;CL:0000069,1.17e-16,3;CL:0000307,1.17e-16,3;CL:0000377,1.17e-16,3;CL:0002202,2.06e-12,9;CL:0002632,2.06e-12,9;CL:0000066,7.03e-10,253;CL:0002368,9.24e-09,13;CL:0000317,2.43e-07,2;CL:1000448,2.43e-07,2;CL:0002308,2.43e-07,2;CL:0002140,2.43e-07,2;CL:0002076,6.75e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000377;9.62e-17;3!UBERON:0008814;3.92e-07;2!UBERON:0010056;3.92e-07;2 | |||
|ontology_enrichment_disease=DOID:0050687!1.30e-26!143;DOID:305!1.30e-26!106;DOID:162!2.87e-18!235;DOID:14566!1.72e-17!239;DOID:1749!3.40e-13!14;DOID:299!3.22e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.71e-14;14!DOID:3112;5.37e-13;1!DOID:1909;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.54e-14,14;DOID:3112,8.64e-13,1;DOID:1909,3.70e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!2.35e-12!155;UBERON:0001555!2.35e-12!155;UBERON:0007026!2.35e-12!155;UBERON:0000344!5.51e-12!12;UBERON:0001004!8.15e-12!72;UBERON:0004119!9.12e-12!169;UBERON:0000925!9.12e-12!169;UBERON:0006595!9.12e-12!169;UBERON:0008947!1.12e-09!38;UBERON:0003258!1.12e-09!38;UBERON:0001737!1.82e-09!9;UBERON:0000072!2.03e-09!46;UBERON:0003729!5.28e-09!5;UBERON:0000077!7.46e-09!130;UBERON:0004921!9.22e-09!129;UBERON:0004185!9.22e-09!129;UBERON:0000065!1.53e-08!53;UBERON:0005153!3.96e-08!37;UBERON:0001911!4.83e-08!4;UBERON:0005333!4.83e-08!4;UBERON:0008425!4.83e-08!4;UBERON:0005311!4.83e-08!4;UBERON:0003343!1.72e-07!4;UBERON:0004785!1.72e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;9.98e-27;4!UBERON:0003343;1.31e-12;4!UBERON:0004785;1.31e-12;4!UBERON:0000974;1.04e-08;6!UBERON:0003126;1.07e-07;7!UBERON:0001005;1.07e-07;7!UBERON:0007196;1.24e-07;15!UBERON:0001558;1.24e-07;15!UBERON:0002419;2.50e-07;2!UBERON:0007771;2.50e-07;2!UBERON:0003297;2.50e-07;2!UBERON:0001821;2.50e-07;2!UBERON:0003487;2.50e-07;2!UBERON:0001820;2.50e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,5.39e-27,4;UBERON:0005333,5.39e-27,4;UBERON:0008425,5.39e-27,4;UBERON:0005311,5.39e-27,4;UBERON:0000076,7.84e-14,8;UBERON:0003343,1.56e-12,4;UBERON:0004785,1.56e-12,4;UBERON:0007196,1.17e-07,15;UBERON:0001558,1.17e-07,15;UBERON:0003126,1.17e-07,7;UBERON:0001005,1.17e-07,7;UBERON:0002419,2.43e-07,2;UBERON:0007771,2.43e-07,2;UBERON:0003297,2.43e-07,2;UBERON:0001821,2.43e-07,2;UBERON:0003487,2.43e-07,2;UBERON:0001820,2.43e-07,2;UBERON:0005089,2.43e-07,2;UBERON:0005088,2.43e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0.723033089650446,0.772057809126758,0,0.474541238222193,0.539325232640658,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.904760751704678,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.00789276919316,0.708875486211932,1.97028749946266,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,2.60024098414608,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15466535270614,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,3.75518379342149,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0.948768663620925,0,0.210998064528027,0.163232808159148,0.282706142867882,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0.261177619741208,0,0,0.290268993867255,0,0.0821154570532092,0,0,0.225980740780532,0.137041924646751,0,0,0.391102765469606,0,0.213452994739353,0,0.576361668616424,0,0,0.432164393964449,0,1.17847017308398,0.543616824294456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.499921631848426,1.21319294033318,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0.463044948647668,0,0,0,0,0,0.578742114812744,1.18259708457151,0.512483037175893,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0.169732529954025,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,1.10057159113007,1.38630799380406,0,0,0,0,0,0.781514011233092,0,1.14640342257068,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.236387681767936,0.333694205676207,0,0,0.280272163313789,0,0.431855182437243,0,0,0,0.116241425368125,0,0,0.62164849248911,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0.243835849964539,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,0.560659312903067,0,0,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0.723033089650446,0.772057809126758,0,0.474541238222193,0.539325232640658,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.904760751704678,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.00789276919316,0.708875486211932,1.97028749946266,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,2.60024098414608,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15466535270614,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,3.75518379342149,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0.948768663620925,0,0.210998064528027,0.163232808159148,0.282706142867882,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0.261177619741208,0,0,0.290268993867255,0,0.0821154570532092,0,0,0.225980740780532,0.137041924646751,0,0,0.391102765469606,0,0.213452994739353,0,0.576361668616424,0,0,0.432164393964449,0,1.17847017308398,0.543616824294456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.499921631848426,1.21319294033318,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0.463044948647668,0,0,0,0,0,0.578742114812744,1.18259708457151,0.512483037175893,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0.169732529954025,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,1.10057159113007,1.38630799380406,0,0,0,0,0,0.781514011233092,0,1.14640342257068,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.236387681767936,0.333694205676207,0,0,0.280272163313789,0,0.431855182437243,0,0,0,0.116241425368125,0,0,0.62164849248911,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0.243835849964539,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,0.560659312903067,0,0,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:41004368..41004374,+ | |||
}} | }} |
Latest revision as of 01:29, 31 July 2015
Short description: | p@chr6:41004368..41004374, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:41004368..41004374, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 5.39e-27 | 4 |
duct epithelial cell | 1.17e-16 | 3 |
branched duct epithelial cell | 1.17e-16 | 3 |
tracheal epithelial cell | 1.17e-16 | 3 |
tracheoblast | 1.17e-16 | 3 |
epithelial cell of tracheobronchial tree | 2.06e-12 | 9 |
epithelial cell of lower respiratory tract | 2.06e-12 | 9 |
epithelial cell | 7.03e-10 | 253 |
respiratory epithelial cell | 9.24e-09 | 13 |
sebum secreting cell | 2.43e-07 | 2 |
epithelial cell of sweat gland | 2.43e-07 | 2 |
epithelial cell of skin gland | 2.43e-07 | 2 |
acinar cell of sebaceous gland | 2.43e-07 | 2 |
endo-epithelial cell | 6.75e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 5.39e-27 | 4 |
mammary bud | 5.39e-27 | 4 |
mammary ridge | 5.39e-27 | 4 |
mammary placode | 5.39e-27 | 4 |
external ectoderm | 7.84e-14 | 8 |
mucosa of oral region | 1.56e-12 | 4 |
respiratory system mucosa | 1.56e-12 | 4 |
tracheobronchial tree | 1.17e-07 | 15 |
lower respiratory tract | 1.17e-07 | 15 |
trachea | 1.17e-07 | 7 |
respiratory airway | 1.17e-07 | 7 |
skin gland | 2.43e-07 | 2 |
epidermis gland | 2.43e-07 | 2 |
gland of integumental system | 2.43e-07 | 2 |
sebaceous gland | 2.43e-07 | 2 |
skin sebaceous gland | 2.43e-07 | 2 |
sweat gland | 2.43e-07 | 2 |
sweat gland placode | 2.43e-07 | 2 |
sebaceous gland placode | 2.43e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.54e-14 | 14 |
papillary adenocarcinoma | 8.64e-13 | 1 |
melanoma | 3.70e-07 | 2 |