FFCP PHASE1:Hg19::chr6:3912262..3912280,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:3912262..3912280,-
|short_description=p2@BX647262
|description=CAGE_peak_2_at_BX647262_5end
|association_with_transcript=-49bp_to_BX647262_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-49bp_to_BX647262_5end | |||
|cluster_id=chr6:3912262..3912280,- | |||
|coexpression_cluster_id=C4600 | |||
|description=CAGE_peak_2_at_BX647262_5end | |||
|id=chr6:3912262..3912280,- | |||
|ontology_enrichment_celltype=CL:0002139!6.91e-17!24;CL:0000115!8.52e-12!35;CL:0000071!1.11e-10!18;CL:0002546!1.11e-10!18;CL:0000213!4.11e-09!57;CL:0000215!4.11e-09!57;CL:1000413!5.49e-09!9;CL:0005020!2.56e-08!6;CL:0002138!2.56e-08!6;CL:0005022!2.56e-08!6;CL:0002078!5.96e-08!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.20e-25;24!CL:1000413;2.25e-21;9!CL:0000115;1.54e-19;36!CL:0002138;5.52e-17;6!CL:0002544;7.19e-17;6!CL:0002078;5.59e-14;45!CL:0000071;4.37e-13;18!CL:0000213;1.62e-09;58!CL:0000215;1.62e-09;58!CL:0002617;1.74e-08;2!CL:0000136;3.84e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.89e-26,24;CL:0000115,1.02e-21,36;CL:1000413,2.11e-21,9;CL:0000213,7.98e-18,58;CL:0000215,7.98e-18,58;CL:0005020,4.21e-17,6;CL:0002138,4.21e-17,6;CL:0005022,4.21e-17,6;CL:0002544,7.37e-17,6;CL:0002078,1.19e-16,45;CL:0000071,3.94e-13,18;CL:0002546,3.94e-13,18;CL:0002617,2.77e-08,2;CL:0000076,1.15e-07,63;CL:0000066,1.39e-07,253 | |||
|ontology_enrichment_development_v019=CL:0005022;5.52e-17;6!CL:0002546;4.37e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.74e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.97e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000487!9.51e-11!22;UBERON:0001986!1.11e-10!18;UBERON:0004638!1.11e-10!18;UBERON:0004852!1.11e-10!18;UBERON:0003915!5.49e-09!9;UBERON:0004700!5.49e-09!9;UBERON:0001917!5.49e-09!9;UBERON:0006914!7.49e-09!25;UBERON:0003914!4.04e-07!118;UBERON:0003688!5.96e-07!6;UBERON:0002358!5.96e-07!6;UBERON:0003684!5.96e-07!6;UBERON:0001178!5.96e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;2.25e-21;9!UBERON:0004700;2.25e-21;9!UBERON:0001917;2.25e-21;9!UBERON:0000487;3.98e-13;22!UBERON:0004638;4.37e-13;18!UBERON:0001986;4.37e-13;18!UBERON:0004852;4.37e-13;18!UBERON:0001473;1.16e-12;8!UBERON:0004536;1.16e-12;8!UBERON:0006558;1.16e-12;8!UBERON:0006914;2.38e-11;25!UBERON:0000490;1.56e-10;33!UBERON:0002465;4.63e-10;10!UBERON:0005406;1.96e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,2.11e-21,9;UBERON:0004700,2.11e-21,9;UBERON:0001917,2.11e-21,9;UBERON:0000487,3.27e-13,22;UBERON:0004638,3.94e-13,18;UBERON:0001986,3.94e-13,18;UBERON:0004852,3.94e-13,18;UBERON:0001473,9.52e-13,8;UBERON:0004536,9.52e-13,8;UBERON:0006558,9.52e-13,8;UBERON:0006914,2.00e-11,25;UBERON:0002465,3.96e-10,10;UBERON:0005406,1.67e-09,2;UBERON:0001009,2.59e-07,112;UBERON:0000055,3.20e-07,68 | |||
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| ||
|short_description=p2@BX647262 | |||
}} | }} |
Latest revision as of 01:24, 31 July 2015
Short description: | p2@BX647262 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BX647262_5end |
Coexpression cluster: | C4600_heart_chorionic_Endothelial_Sertoli_Intestinal_Ewing_hepatic |
Association with transcript: | -49bp_to_BX647262_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.89e-26 | 24 |
endothelial cell | 1.02e-21 | 36 |
endothelial cell of artery | 2.11e-21 | 9 |
lining cell | 7.98e-18 | 58 |
barrier cell | 7.98e-18 | 58 |
lymphangioblast | 4.21e-17 | 6 |
endothelial cell of lymphatic vessel | 4.21e-17 | 6 |
vascular lymphangioblast | 4.21e-17 | 6 |
aortic endothelial cell | 7.37e-17 | 6 |
meso-epithelial cell | 1.19e-16 | 45 |
blood vessel endothelial cell | 3.94e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.94e-13 | 18 |
adipocyte of breast | 2.77e-08 | 2 |
squamous epithelial cell | 1.15e-07 | 63 |
epithelial cell | 1.39e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 2.11e-21 | 9 |
arterial system endothelium | 2.11e-21 | 9 |
endothelium of artery | 2.11e-21 | 9 |
simple squamous epithelium | 3.27e-13 | 22 |
blood vessel endothelium | 3.94e-13 | 18 |
endothelium | 3.94e-13 | 18 |
cardiovascular system endothelium | 3.94e-13 | 18 |
lymphatic vessel | 9.52e-13 | 8 |
lymph vasculature | 9.52e-13 | 8 |
lymphatic part of lymphoid system | 9.52e-13 | 8 |
squamous epithelium | 2.00e-11 | 25 |
lymphoid system | 3.96e-10 | 10 |
perirenal fat | 1.67e-09 | 2 |
circulatory system | 2.59e-07 | 112 |
vessel | 3.20e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.97e-08 | 2 |